RNA–Protein interactions for RNA: ENST00000316407.8

USF3-201, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 13,708 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-201ENST00000316407 RPL18AQ02543 176 aaKnown RBP6.93□□□□□ -1.3
USF3-201ENST00000316407 Q6ZQT7 251 aa6.93□□□□□ -1.3
USF3-201ENST00000316407 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.93□□□□□ -1.3
USF3-201ENST00000316407 MRPL14Q6P1L8 145 aaKnown RBP6.93□□□□□ -1.3
USF3-201ENST00000316407 CGB3P0DN86 165 aa6.93□□□□□ -1.3
USF3-201ENST00000316407 FUSP35637 526 aaKnown RBP eCLIP6.93□□□□□ -1.3
USF3-201ENST00000316407 C20orf78Q9BR46 151 aa6.93□□□□□ -1.3
USF3-201ENST00000316407 LRP4O75096 1905 aa6.93□□□□□ -1.3
USF3-201ENST00000316407 RPL39P62891 51 aaKnown RBP6.93□□□□□ -1.3
USF3-201ENST00000316407 TMEM190Q8WZ59 177 aa6.93□□□□□ -1.3
USF3-201ENST00000316407 GPR179Q6PRD1 2367 aa6.93□□□□□ -1.3
USF3-201ENST00000316407 TRAV4A0A0B4J268 109 aa6.92□□□□□ -1.3
USF3-201ENST00000316407 RUSC1-AS1Q66K80 236 aa6.92□□□□□ -1.3
USF3-201ENST00000316407 TRBV6-6A0A0A6YYG2 114 aa6.92□□□□□ -1.3
USF3-201ENST00000316407 IGLV3-32A0A0A0MS00 114 aa6.92□□□□□ -1.3
USF3-201ENST00000316407 G3V318 75 aa6.92□□□□□ -1.3
USF3-201ENST00000316407 WT1-ASQ06250 92 aa6.92□□□□□ -1.3
USF3-201ENST00000316407 IGKV2D-26A0A0A0MRZ7 120 aa6.92□□□□□ -1.3
USF3-201ENST00000316407 TCL1BO95988 128 aa6.92□□□□□ -1.3
USF3-201ENST00000316407 PRDM6Q9NQX0 595 aa6.92□□□□□ -1.3
USF3-201ENST00000316407 ATP6V0E1O15342 81 aa6.92□□□□□ -1.3
USF3-201ENST00000316407 SLC25A29Q8N8R3 303 aa6.92□□□□□ -1.3
USF3-201ENST00000316407 FLVCR1-AS1Q8TAF5 88 aa6.92□□□□□ -1.3
USF3-201ENST00000316407 FAM231DQ6ZW35 169 aa6.92□□□□□ -1.3
USF3-201ENST00000316407 RNASE6Q93091 150 aaKnown RBP6.92□□□□□ -1.3
USF3-201ENST00000316407 DEFB121Q5J5C9 76 aa6.92□□□□□ -1.3
USF3-201ENST00000316407 CGB7P0DN87 165 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 TTC28Q96AY4 2481 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 UCNP55089 124 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 Q6ZR03 302 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 PTPRSQ13332 1948 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 IGF2BP2-AS1Q96M15 143 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 WI2-2373I1.2A0A1W2PRP0 233 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 COL5A1P20908 1838 aaPredicted RBP6.91□□□□□ -1.3
USF3-201ENST00000316407 COL4A6Q14031 1691 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 ZNF672Q499Z4 452 aaPredicted RBP6.91□□□□□ -1.3
USF3-201ENST00000316407 LINC01545Q5VT33 79 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 VSIG2Q96IQ7 327 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 NCR3O14931 201 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 MP68P56378 58 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 UBE2BP63146 152 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 LINC01620Q4KN68 170 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 UPK3BQ9BT76 320 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 RAI1Q7Z5J4 1906 aaPredicted RBP6.91□□□□□ -1.3
USF3-201ENST00000316407 Q9HAA7 133 aa6.91□□□□□ -1.3
USF3-201ENST00000316407 C10orf105Q8TEF2 133 aa6.9□□□□□ -1.3
USF3-201ENST00000316407 USMG5Q96IX5 58 aa6.9□□□□□ -1.3
USF3-201ENST00000316407 Q6ZS49 121 aa6.9□□□□□ -1.3
USF3-201ENST00000316407 SPATA12Q7Z6I5 190 aa6.9□□□□□ -1.3
USF3-201ENST00000316407 FRMD6-AS1P0C7T7 363 aa6.9□□□□□ -1.3
USF3-201ENST00000316407 LOXL1Q08397 574 aaPredicted RBP6.9□□□□□ -1.3
USF3-201ENST00000316407 MAPK1IP1LQ8NDC0 245 aa6.9□□□□□ -1.3
USF3-201ENST00000316407 PROP1O75360 226 aa6.9□□□□□ -1.31
USF3-201ENST00000316407 MYO9AB2RTY4 2548 aa6.9□□□□□ -1.31
USF3-201ENST00000316407 FHL1Q13642 323 aa6.89□□□□□ -1.31
USF3-201ENST00000316407 NREPQ16612 68 aa6.89□□□□□ -1.31
USF3-201ENST00000316407 C11orf52Q96A22 123 aa6.89□□□□□ -1.31
USF3-201ENST00000316407 MBD3L4A6NDZ8 208 aaPredicted RBP6.89□□□□□ -1.31
USF3-201ENST00000316407 MBD3L3A6NE82 208 aaPredicted RBP6.89□□□□□ -1.31
USF3-201ENST00000316407 MBD3L5A6NJ08 208 aaPredicted RBP6.89□□□□□ -1.31
USF3-201ENST00000316407 MBD3L2Q8NHZ7 208 aaPredicted RBP6.89□□□□□ -1.31
USF3-201ENST00000316407 VOPP1Q96AW1 172 aa6.89□□□□□ -1.31
USF3-201ENST00000316407 C5orf38Q86SI9 138 aa6.89□□□□□ -1.31
USF3-201ENST00000316407 H3BRN7 92 aa6.89□□□□□ -1.31
USF3-201ENST00000316407 COL8A2P25067 703 aa6.89□□□□□ -1.31
USF3-201ENST00000316407 DIAPH2-AS1Q14236 149 aa6.89□□□□□ -1.31
USF3-201ENST00000316407 SND1-IT1Q9HBX3 110 aa6.89□□□□□ -1.31
USF3-201ENST00000316407 LY6DQ14210 128 aa6.89□□□□□ -1.31
USF3-201ENST00000316407 C20orf197Q8N268 126 aa6.89□□□□□ -1.31
USF3-201ENST00000316407 FAM110AQ9BQ89 295 aa6.89□□□□□ -1.31
USF3-201ENST00000316407 PYGO2Q9BRQ0 406 aa6.88□□□□□ -1.31
USF3-201ENST00000316407 NDUFB8O95169 186 aa6.88□□□□□ -1.31
USF3-201ENST00000316407 SEM1Q6ZVN7 128 aa6.88□□□□□ -1.31
USF3-201ENST00000316407 NOP10Q9NPE3 64 aaKnown RBP6.88□□□□□ -1.31
USF3-201ENST00000316407 LHBP01229 141 aa6.88□□□□□ -1.31
USF3-201ENST00000316407 LECT2O14960 151 aa6.88□□□□□ -1.31
USF3-201ENST00000316407 C3orf22Q8N5N4 141 aa6.88□□□□□ -1.31
USF3-201ENST00000316407 TMEM14CQ9P0S9 112 aa6.88□□□□□ -1.31
USF3-201ENST00000316407 SNURFQ9Y675 71 aa6.88□□□□□ -1.31
USF3-201ENST00000316407 ATP6V0E2Q8NHE4 81 aa6.88□□□□□ -1.31
USF3-201ENST00000316407 HIST2H2BCQ6DN03 193 aa6.88□□□□□ -1.31
USF3-201ENST00000316407 PROK2Q9HC23 129 aa6.88□□□□□ -1.31
USF3-201ENST00000316407 SPANXB1Q9NS25 103 aaPredicted RBP6.88□□□□□ -1.31
USF3-201ENST00000316407 RHOHQ15669 191 aa6.87□□□□□ -1.31
USF3-201ENST00000316407 TIMM17AQ99595 171 aa6.87□□□□□ -1.31
USF3-201ENST00000316407 CCDC179H3BU77 68 aa6.87□□□□□ -1.31
USF3-201ENST00000316407 ZNF833PQ6ZTB9 187 aa6.87□□□□□ -1.31
USF3-201ENST00000316407 CPAMD8Q8IZJ3 1885 aa6.87□□□□□ -1.31
USF3-201ENST00000316407 Q0VFX4 171 aa6.87□□□□□ -1.31
USF3-201ENST00000316407 FAM236DA0A1B0GTK5 79 aa6.87□□□□□ -1.31
USF3-201ENST00000316407 FAM236CP0DP71 79 aa6.87□□□□□ -1.31
USF3-201ENST00000316407 A0A0J9YY99 117 aa6.87□□□□□ -1.31
USF3-201ENST00000316407 IGLC6P0CF74 106 aa6.87□□□□□ -1.31
USF3-201ENST00000316407 MINOS1Q5TGZ0 78 aa6.87□□□□□ -1.31
USF3-201ENST00000316407 MINOS1-NBL1R4GNA1 71 aa6.87□□□□□ -1.31
USF3-201ENST00000316407 COA6Q5JTJ3 125 aaKnown RBP6.87□□□□□ -1.31
USF3-201ENST00000316407 TMEM105Q8N8V8 129 aa6.87□□□□□ -1.31
USF3-201ENST00000316407 C1orf53Q5VUE5 145 aa6.87□□□□□ -1.31
USF3-201ENST00000316407 ANKHD1Q8IWZ3 2542 aaKnown RBP6.87□□□□□ -1.31
USF3-201ENST00000316407 CCDC168Q8NDH2 2452 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms