RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 SRRM4A7MD48 611 aaKnown RBP9.09□□□□□ -0.95
LDLRAD3-201ENST00000315571 CFC1BP0CG36 223 aa9.09□□□□□ -0.95
LDLRAD3-201ENST00000315571 CFC1P0CG37 223 aa9.09□□□□□ -0.95
LDLRAD3-201ENST00000315571 Q71RC1 249 aaPredicted RBP9.09□□□□□ -0.95
LDLRAD3-201ENST00000315571 TRAV26-2A0A0B4J265 109 aa9.09□□□□□ -0.95
LDLRAD3-201ENST00000315571 LINC01559Q495D7 138 aa9.09□□□□□ -0.95
LDLRAD3-201ENST00000315571 PKDREJQ9NTG1 2253 aa9.09□□□□□ -0.95
LDLRAD3-201ENST00000315571 C17orf100A8MU93 164 aa9.09□□□□□ -0.96
LDLRAD3-201ENST00000315571 IGHV1-46P01743 117 aa9.09□□□□□ -0.96
LDLRAD3-201ENST00000315571 IL17RELQ6ZVW7 336 aa9.09□□□□□ -0.96
LDLRAD3-201ENST00000315571 Q8TAT8 98 aa9.08□□□□□ -0.96
LDLRAD3-201ENST00000315571 PROP1O75360 226 aa9.08□□□□□ -0.96
LDLRAD3-201ENST00000315571 MGPP08493 103 aa9.08□□□□□ -0.96
LDLRAD3-201ENST00000315571 CCL8P80075 99 aa9.08□□□□□ -0.96
LDLRAD3-201ENST00000315571 ZCCHC24Q8N2G6 241 aaKnown RBP9.08□□□□□ -0.96
LDLRAD3-201ENST00000315571 RNF152Q8N8N0 203 aa9.08□□□□□ -0.96
LDLRAD3-201ENST00000315571 ODF3Q96PU9 254 aa9.08□□□□□ -0.96
LDLRAD3-201ENST00000315571 SLC25A39Q9BZJ4 359 aaPredicted RBP9.08□□□□□ -0.96
LDLRAD3-201ENST00000315571 ZNF134P52741 427 aa9.08□□□□□ -0.96
LDLRAD3-201ENST00000315571 LINC00477Q96M19 166 aa9.08□□□□□ -0.96
LDLRAD3-201ENST00000315571 A0A0U1RQV1 116 aa9.07□□□□□ -0.96
LDLRAD3-201ENST00000315571 NPC2P61916 151 aa9.07□□□□□ -0.96
LDLRAD3-201ENST00000315571 TRAV13-1A0A0B4J241 112 aa9.07□□□□□ -0.96
LDLRAD3-201ENST00000315571 A0A1W2PPR1 153 aa9.07□□□□□ -0.96
LDLRAD3-201ENST00000315571 WDR86Q86TI4 376 aa9.07□□□□□ -0.96
LDLRAD3-201ENST00000315571 TMEM75Q8N9X5 138 aa9.07□□□□□ -0.96
LDLRAD3-201ENST00000315571 CGB1A6NKQ9 187 aa9.07□□□□□ -0.96
LDLRAD3-201ENST00000315571 UBE2D3P61077 147 aa9.07□□□□□ -0.96
LDLRAD3-201ENST00000315571 UBE2D2P62837 147 aa9.07□□□□□ -0.96
LDLRAD3-201ENST00000315571 CEMP1Q6PRD7 247 aaPredicted RBP9.07□□□□□ -0.96
LDLRAD3-201ENST00000315571 TMEM133Q9H2Q1 129 aa9.07□□□□□ -0.96
LDLRAD3-201ENST00000315571 IGKV2-40A0A087WW87 121 aaPredicted RBP9.06□□□□□ -0.96
LDLRAD3-201ENST00000315571 GAS8-AS1O95177 125 aa9.06□□□□□ -0.96
LDLRAD3-201ENST00000315571 IGKV2D-40P01614 121 aaPredicted RBP9.06□□□□□ -0.96
LDLRAD3-201ENST00000315571 C17orf77Q96MU5 243 aa9.06□□□□□ -0.96
LDLRAD3-201ENST00000315571 IGHV3-72A0A0B4J1Y9 119 aa9.06□□□□□ -0.96
LDLRAD3-201ENST00000315571 LGALS9O00182 355 aa9.06□□□□□ -0.96
LDLRAD3-201ENST00000315571 S100A4P26447 101 aaKnown RBP9.06□□□□□ -0.96
LDLRAD3-201ENST00000315571 CNTFRP26992 372 aa9.06□□□□□ -0.96
LDLRAD3-201ENST00000315571 Q8N8P6 123 aa9.06□□□□□ -0.96
LDLRAD3-201ENST00000315571 EEF1AKMT3Q96AZ1 226 aa9.06□□□□□ -0.96
LDLRAD3-201ENST00000315571 PIFOQ8TCI5 191 aa9.06□□□□□ -0.96
LDLRAD3-201ENST00000315571 MRAPQ8TCY5 172 aa9.06□□□□□ -0.96
LDLRAD3-201ENST00000315571 ZNF22P17026 224 aaPredicted RBP9.05□□□□□ -0.96
LDLRAD3-201ENST00000315571 RPL35AP18077 110 aaKnown RBP9.05□□□□□ -0.96
LDLRAD3-201ENST00000315571 C10orf105Q8TEF2 133 aa9.05□□□□□ -0.96
LDLRAD3-201ENST00000315571 ZNRD1Q9P1U0 126 aa9.05□□□□□ -0.96
LDLRAD3-201ENST00000315571 HELZ2Q9BYK8 2649 aaKnown RBP9.05□□□□□ -0.96
LDLRAD3-201ENST00000315571 COL12A1Q99715 3063 aa9.05□□□□□ -0.96
LDLRAD3-201ENST00000315571 DLX6P56179 175 aa9.04□□□□□ -0.96
LDLRAD3-201ENST00000315571 NSUN5P1Q3KNT7 163 aa9.04□□□□□ -0.96
LDLRAD3-201ENST00000315571 DTX2Q86UW9 622 aa9.04□□□□□ -0.96
LDLRAD3-201ENST00000315571 IGFBPL1Q8WX77 278 aa9.04□□□□□ -0.96
LDLRAD3-201ENST00000315571 TET2Q6N021 2002 aaPredicted RBP9.04□□□□□ -0.96
LDLRAD3-201ENST00000315571 NACAE9PAV3 2078 aa9.04□□□□□ -0.96
LDLRAD3-201ENST00000315571 S4R3C0 116 aa9.04□□□□□ -0.96
LDLRAD3-201ENST00000315571 TRBV10-2A0A0K0K1G8 114 aa9.04□□□□□ -0.96
LDLRAD3-201ENST00000315571 J3QLI3 93 aa9.04□□□□□ -0.96
LDLRAD3-201ENST00000315571 VMA21Q3ZAQ7 101 aa9.04□□□□□ -0.96
LDLRAD3-201ENST00000315571 SPRNQ5BIV9 151 aa9.04□□□□□ -0.96
LDLRAD3-201ENST00000315571 USP9YO00507 2555 aaPredicted RBP9.04□□□□□ -0.96
LDLRAD3-201ENST00000315571 RNF7Q9UBF6 113 aa9.03□□□□□ -0.96
LDLRAD3-201ENST00000315571 A0A1B0GX51 115 aa9.03□□□□□ -0.96
LDLRAD3-201ENST00000315571 GATA4P43694 442 aa9.03□□□□□ -0.96
LDLRAD3-201ENST00000315571 EIF4EBP1Q13541 118 aaPredicted RBP9.03□□□□□ -0.96
LDLRAD3-201ENST00000315571 KIR2DL5BQ8NHK3 375 aa9.03□□□□□ -0.96
LDLRAD3-201ENST00000315571 CCL17Q92583 94 aa9.03□□□□□ -0.96
LDLRAD3-201ENST00000315571 MRPL36Q9P0J6 103 aaKnown RBP9.03□□□□□ -0.96
LDLRAD3-201ENST00000315571 V9GYY9 64 aa9.03□□□□□ -0.96
LDLRAD3-201ENST00000315571 INS-IGF2F8WCM5 200 aa9.03□□□□□ -0.96
LDLRAD3-201ENST00000315571 MYCNOSP40205 109 aa9.03□□□□□ -0.96
LDLRAD3-201ENST00000315571 IGFL4Q6B9Z1 124 aa9.03□□□□□ -0.96
LDLRAD3-201ENST00000315571 C11orf71Q6IPW1 123 aa9.03□□□□□ -0.96
LDLRAD3-201ENST00000315571 C11orf53Q8IXP5 236 aa9.03□□□□□ -0.96
LDLRAD3-201ENST00000315571 PSMG3-AS1Q96PY0 264 aa9.03□□□□□ -0.96
LDLRAD3-201ENST00000315571 SEC61GP60059 68 aa9.02□□□□□ -0.96
LDLRAD3-201ENST00000315571 SIGLEC15Q6ZMC9 328 aa9.02□□□□□ -0.96
LDLRAD3-201ENST00000315571 CCL19Q99731 98 aa9.02□□□□□ -0.96
LDLRAD3-201ENST00000315571 TINCRA0A1B0GVN0 87 aa9.02□□□□□ -0.97
LDLRAD3-201ENST00000315571 UBE2D1P51668 147 aa9.02□□□□□ -0.97
LDLRAD3-201ENST00000315571 FAM201AQ5SY85 155 aa9.02□□□□□ -0.97
LDLRAD3-201ENST00000315571 LINC00526Q96FQ7 95 aa9.02□□□□□ -0.97
LDLRAD3-201ENST00000315571 M0R381 172 aa9.01□□□□□ -0.97
LDLRAD3-201ENST00000315571 EGR2P11161 476 aaPredicted RBP9.01□□□□□ -0.97
LDLRAD3-201ENST00000315571 ZMAT4Q9H898 229 aa9.01□□□□□ -0.97
LDLRAD3-201ENST00000315571 ZNF785A8K8V0 405 aa9.01□□□□□ -0.97
LDLRAD3-201ENST00000315571 WIPF1O43516 503 aa9.01□□□□□ -0.97
LDLRAD3-201ENST00000315571 ERCC8Q13216 396 aa9.01□□□□□ -0.97
LDLRAD3-201ENST00000315571 PRR25Q96S07 402 aa9.01□□□□□ -0.97
LDLRAD3-201ENST00000315571 F5H697 171 aa9.01□□□□□ -0.97
LDLRAD3-201ENST00000315571 COX7CP15954 63 aa9.01□□□□□ -0.97
LDLRAD3-201ENST00000315571 WT1-ASQ06250 92 aa9.01□□□□□ -0.97
LDLRAD3-201ENST00000315571 ORMDL2Q53FV1 153 aa9.01□□□□□ -0.97
LDLRAD3-201ENST00000315571 WFDC11Q8NEX6 87 aa9.01□□□□□ -0.97
LDLRAD3-201ENST00000315571 FASNP49327 2511 aaKnown RBP9□□□□□ -0.97
LDLRAD3-201ENST00000315571 TRAV16A0A0A6YYK6 109 aaPredicted RBP9□□□□□ -0.97
LDLRAD3-201ENST00000315571 SRRM5B3KS81 715 aa9□□□□□ -0.97
LDLRAD3-201ENST00000315571 IGHG4P01861 327 aa9□□□□□ -0.97
LDLRAD3-201ENST00000315571 IGHV3OR16-8A0A075B7F1 116 aa9□□□□□ -0.97
LDLRAD3-201ENST00000315571 GP9P14770 177 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms