RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 ZNF702PQ9H963 129 aa9.39□□□□□ -0.91
RNF4-201ENST00000314289 TMEM238C9JI98 176 aa9.39□□□□□ -0.91
RNF4-201ENST00000314289 K7EP34 96 aa9.39□□□□□ -0.91
RNF4-201ENST00000314289 IGKV3-20P01619 116 aa9.39□□□□□ -0.91
RNF4-201ENST00000314289 IGLC6P0CF74 106 aa9.39□□□□□ -0.91
RNF4-201ENST00000314289 Q6AWC8 147 aa9.39□□□□□ -0.91
RNF4-201ENST00000314289 RBAKDNA6NC62 111 aa9.38□□□□□ -0.91
RNF4-201ENST00000314289 SOCS3O14543 225 aa9.38□□□□□ -0.91
RNF4-201ENST00000314289 FSHBP01225 129 aa9.38□□□□□ -0.91
RNF4-201ENST00000314289 MRPL51Q4U2R6 128 aaKnown RBP9.38□□□□□ -0.91
RNF4-201ENST00000314289 SMPXQ9UHP9 88 aa9.38□□□□□ -0.91
RNF4-201ENST00000314289 SPCS1Q9Y6A9 102 aa9.38□□□□□ -0.91
RNF4-201ENST00000314289 HSD52Q0P140 79 aa9.38□□□□□ -0.91
RNF4-201ENST00000314289 KHDC1LQ5JSQ8 128 aa9.38□□□□□ -0.91
RNF4-201ENST00000314289 FAM104BQ5XKR9 115 aa9.38□□□□□ -0.91
RNF4-201ENST00000314289 C9orf47Q6ZRZ4 202 aa9.38□□□□□ -0.91
RNF4-201ENST00000314289 BOD1L2Q8IYS8 172 aa9.38□□□□□ -0.91
RNF4-201ENST00000314289 ATP6V0BQ99437 205 aa9.38□□□□□ -0.91
RNF4-201ENST00000314289 IGHV4OR15-8A0A075B7B6 117 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 A0A087WW49 117 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 GATA1P15976 413 aaPredicted RBP9.37□□□□□ -0.91
RNF4-201ENST00000314289 ORMDL3Q8N138 153 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 C11orf44Q8N8P7 122 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 DKK2Q9UBU2 259 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 HBDP02042 147 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 EVI2AP22794 236 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 RNASE4P34096 147 aaKnown RBP9.37□□□□□ -0.91
RNF4-201ENST00000314289 OR10J6PQ8NGY7 276 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 TTTY13Q9BZ97 58 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 FBLL1A6NHQ2 334 aaKnown RBP9.37□□□□□ -0.91
RNF4-201ENST00000314289 H3BVH4 76 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 ZNF688P0C7X2 276 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 CKS2P33552 79 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 LGALS9BQ3B8N2 356 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 LGALS9CQ6DKI2 356 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 IFI27L1Q96BM0 104 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 PSMG3-AS1Q96PY0 264 aa9.37□□□□□ -0.91
RNF4-201ENST00000314289 GCSHP23434 173 aa9.36□□□□□ -0.91
RNF4-201ENST00000314289 LINC01559Q495D7 138 aa9.36□□□□□ -0.91
RNF4-201ENST00000314289 G3V4G9 280 aa9.36□□□□□ -0.91
RNF4-201ENST00000314289 BRI3O95415 125 aa9.36□□□□□ -0.91
RNF4-201ENST00000314289 NPYP01303 97 aa9.36□□□□□ -0.91
RNF4-201ENST00000314289 RPL24P83731 157 aaKnown RBP9.36□□□□□ -0.91
RNF4-201ENST00000314289 ADAMTSL5Q6ZMM2 481 aa9.36□□□□□ -0.91
RNF4-201ENST00000314289 OR1N2Q8NGR9 330 aa9.36□□□□□ -0.91
RNF4-201ENST00000314289 UFC1Q9Y3C8 167 aa9.36□□□□□ -0.91
RNF4-201ENST00000314289 JMJD1CQ15652 2540 aa9.35□□□□□ -0.91
RNF4-201ENST00000314289 TRAV26-2A0A0B4J265 109 aa9.35□□□□□ -0.91
RNF4-201ENST00000314289 A0A1B0GW15 77 aa9.35□□□□□ -0.91
RNF4-201ENST00000314289 ZNF493Q6ZR52 646 aa9.35□□□□□ -0.91
RNF4-201ENST00000314289 OR9G4Q8NGQ1 327 aa9.35□□□□□ -0.91
RNF4-201ENST00000314289 A0A1W2PPM0 123 aa9.35□□□□□ -0.91
RNF4-201ENST00000314289 ZFAND2AQ8N6M9 145 aa9.35□□□□□ -0.91
RNF4-201ENST00000314289 K7EMI3 77 aa9.35□□□□□ -0.91
RNF4-201ENST00000314289 PLA2G2AP14555 144 aa9.35□□□□□ -0.91
RNF4-201ENST00000314289 HOXD3P31249 432 aaPredicted RBP9.35□□□□□ -0.91
RNF4-201ENST00000314289 LRRC75A-AS1Q8N1F1 130 aa9.35□□□□□ -0.91
RNF4-201ENST00000314289 MRPL53Q96EL3 112 aaKnown RBP9.35□□□□□ -0.91
RNF4-201ENST00000314289 K7ERJ3 54 aa9.34□□□□□ -0.91
RNF4-201ENST00000314289 SLURP1P55000 103 aa9.34□□□□□ -0.91
RNF4-201ENST00000314289 PSMG4Q5JS54 123 aa9.34□□□□□ -0.91
RNF4-201ENST00000314289 M0R381 172 aa9.34□□□□□ -0.91
RNF4-201ENST00000314289 FABP2P12104 132 aa9.34□□□□□ -0.91
RNF4-201ENST00000314289 GATD1Q8NB37 220 aa9.34□□□□□ -0.91
RNF4-201ENST00000314289 DPF1Q92782 380 aa9.34□□□□□ -0.91
RNF4-201ENST00000314289 RNF185Q96GF1 192 aa9.34□□□□□ -0.91
RNF4-201ENST00000314289 GNRH2O43555 120 aa9.33□□□□□ -0.92
RNF4-201ENST00000314289 SPANXN1Q5VSR9 72 aa9.33□□□□□ -0.92
RNF4-201ENST00000314289 SVIPQ8NHG7 77 aa9.33□□□□□ -0.92
RNF4-201ENST00000314289 DCANP1Q8TF63 244 aa9.33□□□□□ -0.92
RNF4-201ENST00000314289 FXYD2P54710 66 aa9.33□□□□□ -0.92
RNF4-201ENST00000314289 SAMD5Q5TGI4 173 aa9.33□□□□□ -0.92
RNF4-201ENST00000314289 IGKV2D-26A0A0A0MRZ7 120 aa9.33□□□□□ -0.92
RNF4-201ENST00000314289 ANXA2RQ3ZCQ2 193 aa9.33□□□□□ -0.92
RNF4-201ENST00000314289 TRAV12-2A0A075B6T6 113 aa9.32□□□□□ -0.92
RNF4-201ENST00000314289 J3QKU1 62 aa9.32□□□□□ -0.92
RNF4-201ENST00000314289 OVOL1O14753 267 aa9.32□□□□□ -0.92
RNF4-201ENST00000314289 LGALS1P09382 135 aaKnown RBP9.32□□□□□ -0.92
RNF4-201ENST00000314289 NEGR1Q7Z3B1 354 aa9.32□□□□□ -0.92
RNF4-201ENST00000314289 LINC00477Q96M19 166 aa9.32□□□□□ -0.92
RNF4-201ENST00000314289 SMIM13P0DJ93 91 aa9.32□□□□□ -0.92
RNF4-201ENST00000314289 S100A4P26447 101 aaKnown RBP9.32□□□□□ -0.92
RNF4-201ENST00000314289 OR5A1Q8NGJ0 315 aa9.32□□□□□ -0.92
RNF4-201ENST00000314289 U3KQK5 164 aa9.32□□□□□ -0.92
RNF4-201ENST00000314289 SETXQ7Z333 2677 aaKnown RBP9.32□□□□□ -0.92
RNF4-201ENST00000314289 PRSS1P07477 247 aa9.31□□□□□ -0.92
RNF4-201ENST00000314289 TEX48A0A1B0GUV7 120 aa9.31□□□□□ -0.92
RNF4-201ENST00000314289 LEPP41159 167 aa9.31□□□□□ -0.92
RNF4-201ENST00000314289 TCTEX1D4Q5JR98 221 aa9.31□□□□□ -0.92
RNF4-201ENST00000314289 MUC4Q99102 2169 aa9.31□□□□□ -0.92
RNF4-201ENST00000314289 HIVEP2P31629 2446 aa9.31□□□□□ -0.92
RNF4-201ENST00000314289 TRAV12-3A0A0B4J271 114 aa9.3□□□□□ -0.92
RNF4-201ENST00000314289 A0A1W2PRX2 142 aa9.3□□□□□ -0.92
RNF4-201ENST00000314289 K7EMT4 169 aa9.3□□□□□ -0.92
RNF4-201ENST00000314289 DEFB104AQ8WTQ1 72 aa9.3□□□□□ -0.92
RNF4-201ENST00000314289 ZNF580Q9UK33 172 aa9.3□□□□□ -0.92
RNF4-201ENST00000314289 SIVA1O15304 175 aa9.3□□□□□ -0.92
RNF4-201ENST00000314289 ELANEP08246 267 aa9.3□□□□□ -0.92
RNF4-201ENST00000314289 GTSCR1Q86UQ5 136 aa9.3□□□□□ -0.92
RNF4-201ENST00000314289 OR11H1Q8NG94 326 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms