RNA–Protein interactions for RNA: ENST00000311745.9

RBFOX1-201, Transcript of RNA binding fox-1 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RBFOX1, Length 3,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-201ENST00000311745 NCBP2LA6PVI3 153 aaKnown RBP7.37□□□□□ -1.23
RBFOX1-201ENST00000311745 TEX22C9J3V5 150 aa7.37□□□□□ -1.23
RBFOX1-201ENST00000311745 FAM19A4Q96LR4 140 aa7.37□□□□□ -1.23
RBFOX1-201ENST00000311745 D6R8Y8 96 aa7.36□□□□□ -1.23
RBFOX1-201ENST00000311745 PEX7O00628 323 aa7.36□□□□□ -1.23
RBFOX1-201ENST00000311745 OVOL1O14753 267 aa7.36□□□□□ -1.23
RBFOX1-201ENST00000311745 THAP8Q8NA92 274 aa7.36□□□□□ -1.23
RBFOX1-201ENST00000311745 MRPS12O15235 138 aaKnown RBP7.36□□□□□ -1.23
RBFOX1-201ENST00000311745 LINC00322Q6ZN03 302 aaPredicted RBP7.35□□□□□ -1.23
RBFOX1-201ENST00000311745 BRK1Q8WUW1 75 aa7.35□□□□□ -1.23
RBFOX1-201ENST00000311745 CRYBG3Q68DQ2 2970 aa7.35□□□□□ -1.23
RBFOX1-201ENST00000311745 IGHV3-72A0A0B4J1Y9 119 aa7.35□□□□□ -1.23
RBFOX1-201ENST00000311745 SMKR1H3BMG3 65 aa7.35□□□□□ -1.23
RBFOX1-201ENST00000311745 BUB1B-PAK6H3BSN5 160 aa7.35□□□□□ -1.23
RBFOX1-201ENST00000311745 TAL2Q16559 108 aa7.35□□□□□ -1.23
RBFOX1-201ENST00000311745 ZNF785A8K8V0 405 aa7.35□□□□□ -1.23
RBFOX1-201ENST00000311745 DLL1O00548 723 aa7.35□□□□□ -1.23
RBFOX1-201ENST00000311745 DPM2O94777 84 aa7.35□□□□□ -1.23
RBFOX1-201ENST00000311745 ARMS2P0C7Q2 107 aa7.35□□□□□ -1.23
RBFOX1-201ENST00000311745 Q1RN00 199 aa7.35□□□□□ -1.23
RBFOX1-201ENST00000311745 FAM231DQ6ZW35 169 aa7.35□□□□□ -1.23
RBFOX1-201ENST00000311745 CYSTM1Q9H1C7 97 aa7.35□□□□□ -1.23
RBFOX1-201ENST00000311745 ATRXP46100 2492 aa7.34□□□□□ -1.23
RBFOX1-201ENST00000311745 IGHV1-3A0A0C4DH29 117 aa7.34□□□□□ -1.23
RBFOX1-201ENST00000311745 CCL21O00585 134 aa7.34□□□□□ -1.23
RBFOX1-201ENST00000311745 IGHV3-48P01763 117 aa7.34□□□□□ -1.23
RBFOX1-201ENST00000311745 PYYP10082 97 aa7.34□□□□□ -1.23
RBFOX1-201ENST00000311745 DYNLRB1Q9NP97 96 aa7.34□□□□□ -1.23
RBFOX1-201ENST00000311745 COL12A1Q99715 3063 aa7.34□□□□□ -1.23
RBFOX1-201ENST00000311745 TRBV7-3A0A075B6L6 115 aa7.34□□□□□ -1.23
RBFOX1-201ENST00000311745 ZNF22P17026 224 aaPredicted RBP7.34□□□□□ -1.23
RBFOX1-201ENST00000311745 KLRB1Q12918 225 aa7.34□□□□□ -1.23
RBFOX1-201ENST00000311745 H3BMM0 161 aa7.33□□□□□ -1.24
RBFOX1-201ENST00000311745 J3QQQ9 107 aa7.33□□□□□ -1.24
RBFOX1-201ENST00000311745 UBE2WQ96B02 151 aa7.33□□□□□ -1.24
RBFOX1-201ENST00000311745 ODF3BA8MYP8 253 aa7.33□□□□□ -1.24
RBFOX1-201ENST00000311745 CRYGDP07320 174 aa7.33□□□□□ -1.24
RBFOX1-201ENST00000311745 TWIST1Q15672 202 aa7.33□□□□□ -1.24
RBFOX1-201ENST00000311745 DTX2Q86UW9 622 aa7.33□□□□□ -1.24
RBFOX1-201ENST00000311745 MYOZ3Q8TDC0 251 aa7.33□□□□□ -1.24
RBFOX1-201ENST00000311745 A0A1B0GUT8 65 aa7.33□□□□□ -1.24
RBFOX1-201ENST00000311745 COX7CP15954 63 aa7.33□□□□□ -1.24
RBFOX1-201ENST00000311745 CIRBPQ14011 172 aaKnown RBP7.33□□□□□ -1.24
RBFOX1-201ENST00000311745 C7orf69Q9H7B7 122 aa7.33□□□□□ -1.24
RBFOX1-201ENST00000311745 MRPL35Q9NZE8 188 aaKnown RBP7.33□□□□□ -1.24
RBFOX1-201ENST00000311745 WI2-2373I1.2A0A1W2PRP0 233 aa7.32□□□□□ -1.24
RBFOX1-201ENST00000311745 LEPP41159 167 aa7.32□□□□□ -1.24
RBFOX1-201ENST00000311745 DYNAPQ8N1N2 210 aa7.32□□□□□ -1.24
RBFOX1-201ENST00000311745 SRSF12Q8WXF0 261 aaKnown RBP7.32□□□□□ -1.24
RBFOX1-201ENST00000311745 FXYD5Q96DB9 178 aa7.32□□□□□ -1.24
RBFOX1-201ENST00000311745 PRORYQ9H606 182 aa7.32□□□□□ -1.24
RBFOX1-201ENST00000311745 SPTBN4Q9H254 2564 aa7.32□□□□□ -1.24
RBFOX1-201ENST00000311745 UBE2D3P61077 147 aa7.32□□□□□ -1.24
RBFOX1-201ENST00000311745 UBE2D2P62837 147 aa7.32□□□□□ -1.24
RBFOX1-201ENST00000311745 CFAP46Q8IYW2 2715 aa7.32□□□□□ -1.24
RBFOX1-201ENST00000311745 OVOL3O00110 214 aa7.32□□□□□ -1.24
RBFOX1-201ENST00000311745 C8orf88P0DMB2 117 aa7.32□□□□□ -1.24
RBFOX1-201ENST00000311745 RIGQ13278 110 aa7.32□□□□□ -1.24
RBFOX1-201ENST00000311745 Q71RC1 249 aaPredicted RBP7.32□□□□□ -1.24
RBFOX1-201ENST00000311745 ABCA2Q9BZC7 2435 aa7.31□□□□□ -1.24
RBFOX1-201ENST00000311745 H7C1H1 209 aa7.31□□□□□ -1.24
RBFOX1-201ENST00000311745 LGALS9O00182 355 aa7.31□□□□□ -1.24
RBFOX1-201ENST00000311745 SLC25A16P16260 332 aa7.31□□□□□ -1.24
RBFOX1-201ENST00000311745 I3L2K1 104 aa7.3□□□□□ -1.24
RBFOX1-201ENST00000311745 ZFP36P26651 326 aaKnown RBP7.3□□□□□ -1.24
RBFOX1-201ENST00000311745 CKS2P33552 79 aa7.3□□□□□ -1.24
RBFOX1-201ENST00000311745 TMEM170BQ5T4T1 132 aa7.3□□□□□ -1.24
RBFOX1-201ENST00000311745 C2orf82Q6UX34 121 aa7.3□□□□□ -1.24
RBFOX1-201ENST00000311745 GOLT1AQ6ZVE7 132 aa7.3□□□□□ -1.24
RBFOX1-201ENST00000311745 ANKHD1Q8IWZ3 2542 aaKnown RBP7.3□□□□□ -1.24
RBFOX1-201ENST00000311745 UTP20O75691 2785 aaKnown RBP7.3□□□□□ -1.24
RBFOX1-201ENST00000311745 PGPA6NDG6 321 aa7.3□□□□□ -1.24
RBFOX1-201ENST00000311745 ZNF329Q86UD4 541 aa7.3□□□□□ -1.24
RBFOX1-201ENST00000311745 SBSPONQ8IVN8 264 aa7.3□□□□□ -1.24
RBFOX1-201ENST00000311745 MAP1BP46821 2468 aaKnown RBP7.3□□□□□ -1.24
RBFOX1-201ENST00000311745 C19orf84I3L1E1 186 aa7.3□□□□□ -1.24
RBFOX1-201ENST00000311745 APELAP0DMC3 54 aa7.3□□□□□ -1.24
RBFOX1-201ENST00000311745 ZNF815PA8K554 130 aa7.29□□□□□ -1.24
RBFOX1-201ENST00000311745 NBR2O15453 112 aa7.29□□□□□ -1.24
RBFOX1-201ENST00000311745 EEF1AKMT3Q96AZ1 226 aa7.29□□□□□ -1.24
RBFOX1-201ENST00000311745 C19orf71A6NCJ1 209 aa7.29□□□□□ -1.24
RBFOX1-201ENST00000311745 F8W735 103 aaPredicted RBP7.29□□□□□ -1.24
RBFOX1-201ENST00000311745 GP9P14770 177 aa7.29□□□□□ -1.24
RBFOX1-201ENST00000311745 ORMDL3Q8N138 153 aa7.29□□□□□ -1.24
RBFOX1-201ENST00000311745 Q8N6K4 173 aa7.29□□□□□ -1.24
RBFOX1-201ENST00000311745 POM121L12Q8N7R1 296 aa7.29□□□□□ -1.24
RBFOX1-201ENST00000311745 ABCA1O95477 2261 aa7.29□□□□□ -1.24
RBFOX1-201ENST00000311745 ZNF469Q96JG9 3925 aaPredicted RBP7.29□□□□□ -1.24
RBFOX1-201ENST00000311745 LGALS1P09382 135 aaKnown RBP7.28□□□□□ -1.24
RBFOX1-201ENST00000311745 COX7A1P24310 79 aa7.28□□□□□ -1.24
RBFOX1-201ENST00000311745 RPL13AP40429 203 aaKnown RBP7.28□□□□□ -1.24
RBFOX1-201ENST00000311745 TMEM258P61165 79 aa7.28□□□□□ -1.24
RBFOX1-201ENST00000311745 ERHP84090 104 aaKnown RBP7.28□□□□□ -1.24
RBFOX1-201ENST00000311745 NDUFA11Q86Y39 141 aa7.28□□□□□ -1.24
RBFOX1-201ENST00000311745 NPBQ8NG41 125 aa7.28□□□□□ -1.24
RBFOX1-201ENST00000311745 HIVEP3Q5T1R4 2406 aa7.28□□□□□ -1.24
RBFOX1-201ENST00000311745 PTPRZ1P23471 2315 aaPredicted RBP7.28□□□□□ -1.24
RBFOX1-201ENST00000311745 VMA21Q3ZAQ7 101 aa7.28□□□□□ -1.24
RBFOX1-201ENST00000311745 LINC01561Q8N1V8 128 aa7.28□□□□□ -1.24
RBFOX1-201ENST00000311745 PAXXQ9BUH6 204 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms