RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 DYNAPQ8N1N2 210 aa12.3□□□□□ -0.44
HCFC1-201ENST00000310441 TEN1Q86WV5 123 aa12.3□□□□□ -0.44
HCFC1-201ENST00000310441 C14orf132Q9NPU4 83 aa12.3□□□□□ -0.44
HCFC1-201ENST00000310441 FXYD5Q96DB9 178 aa12.3□□□□□ -0.44
HCFC1-201ENST00000310441 CD59P13987 128 aa12.29□□□□□ -0.44
HCFC1-201ENST00000310441 K7ERS5 55 aa12.29□□□□□ -0.44
HCFC1-201ENST00000310441 IGKV1-39P01597 117 aa12.29□□□□□ -0.44
HCFC1-201ENST00000310441 IGKV1D-39P04432 117 aa12.29□□□□□ -0.44
HCFC1-201ENST00000310441 LYPD2Q6UXB3 125 aa12.29□□□□□ -0.44
HCFC1-201ENST00000310441 E7EQL1 145 aa12.29□□□□□ -0.44
HCFC1-201ENST00000310441 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.29□□□□□ -0.44
HCFC1-201ENST00000310441 COX7A2LO14548 114 aa12.29□□□□□ -0.44
HCFC1-201ENST00000310441 COL8A2P25067 703 aa12.29□□□□□ -0.44
HCFC1-201ENST00000310441 DEFB105AQ8NG35 78 aa12.28□□□□□ -0.44
HCFC1-201ENST00000310441 CLPSP04118 112 aa12.28□□□□□ -0.44
HCFC1-201ENST00000310441 GNLYP22749 145 aa12.28□□□□□ -0.44
HCFC1-201ENST00000310441 IGLL5B9A064 214 aa12.28□□□□□ -0.44
HCFC1-201ENST00000310441 Q6ZRM9 215 aa12.28□□□□□ -0.44
HCFC1-201ENST00000310441 TMEM105Q8N8V8 129 aa12.28□□□□□ -0.44
HCFC1-201ENST00000310441 KIR2DL5BA0A0G2JN68 375 aa12.28□□□□□ -0.44
HCFC1-201ENST00000310441 KIR2DL5BA0A0G2JPC4 375 aa12.28□□□□□ -0.44
HCFC1-201ENST00000310441 TAX1BP3O14907 124 aa12.28□□□□□ -0.44
HCFC1-201ENST00000310441 MUSTN1Q8IVN3 82 aa12.28□□□□□ -0.44
HCFC1-201ENST00000310441 KIR2DL5AQ8N109 375 aa12.28□□□□□ -0.44
HCFC1-201ENST00000310441 COL4A5P29400 1685 aa12.28□□□□□ -0.44
HCFC1-201ENST00000310441 MRPL23Q16540 153 aaKnown RBP12.28□□□□□ -0.44
HCFC1-201ENST00000310441 TM2D2Q9BX73 214 aa12.27□□□□□ -0.44
HCFC1-201ENST00000310441 TRAV12-2A0A075B6T6 113 aa12.27□□□□□ -0.44
HCFC1-201ENST00000310441 NPSP0C0P6 89 aa12.27□□□□□ -0.44
HCFC1-201ENST00000310441 FOXE3Q13461 319 aa12.27□□□□□ -0.45
HCFC1-201ENST00000310441 IGHV2-5P01817 119 aa12.27□□□□□ -0.45
HCFC1-201ENST00000310441 C17orf82Q86X59 251 aaPredicted RBP12.27□□□□□ -0.45
HCFC1-201ENST00000310441 COL4A1P02462 1669 aa12.27□□□□□ -0.45
HCFC1-201ENST00000310441 B3GALT5-AS1P59052 145 aa12.26□□□□□ -0.45
HCFC1-201ENST00000310441 UNQ6494/PRO21346Q6UXR6 183 aa12.26□□□□□ -0.45
HCFC1-201ENST00000310441 NTN5Q8WTR8 489 aaPredicted RBP12.26□□□□□ -0.45
HCFC1-201ENST00000310441 SND1-IT1Q9HBX3 110 aa12.26□□□□□ -0.45
HCFC1-201ENST00000310441 K7EQD1 137 aa12.26□□□□□ -0.45
HCFC1-201ENST00000310441 BRK1Q8WUW1 75 aa12.26□□□□□ -0.45
HCFC1-201ENST00000310441 NOP10Q9NPE3 64 aaKnown RBP12.26□□□□□ -0.45
HCFC1-201ENST00000310441 PTPRSQ13332 1948 aa12.25□□□□□ -0.45
HCFC1-201ENST00000310441 FAM236AA0A1B0GUQ0 79 aa12.25□□□□□ -0.45
HCFC1-201ENST00000310441 FAM236BA0A1B0GV22 79 aa12.25□□□□□ -0.45
HCFC1-201ENST00000310441 CR1LQ2VPA4 569 aa12.25□□□□□ -0.45
HCFC1-201ENST00000310441 COX7B2Q8TF08 81 aa12.25□□□□□ -0.45
HCFC1-201ENST00000310441 IGHV3-38A0A0C4DH36 116 aa12.25□□□□□ -0.45
HCFC1-201ENST00000310441 ATP6V0E2Q8NHE4 81 aa12.25□□□□□ -0.45
HCFC1-201ENST00000310441 VPREB3Q9UKI3 123 aa12.25□□□□□ -0.45
HCFC1-201ENST00000310441 RNF223E7ERA6 249 aa12.25□□□□□ -0.45
HCFC1-201ENST00000310441 CCL18P55774 89 aa12.25□□□□□ -0.45
HCFC1-201ENST00000310441 CAMK2N2Q96S95 79 aa12.25□□□□□ -0.45
HCFC1-201ENST00000310441 PRB4P10163 310 aaPredicted RBP12.25□□□□□ -0.45
HCFC1-201ENST00000310441 A0A0G2JRQ6 117 aa12.25□□□□□ -0.45
HCFC1-201ENST00000310441 ETV2O00321 342 aaPredicted RBP12.25□□□□□ -0.45
HCFC1-201ENST00000310441 KAAG1Q9UBP8 84 aa12.24□□□□□ -0.45
HCFC1-201ENST00000310441 Q71RC1 249 aaPredicted RBP12.24□□□□□ -0.45
HCFC1-201ENST00000310441 DEFB125Q8N687 156 aa12.24□□□□□ -0.45
HCFC1-201ENST00000310441 IGFL3Q6UXB1 125 aa12.24□□□□□ -0.45
HCFC1-201ENST00000310441 C9orf66Q5T8R8 295 aa12.24□□□□□ -0.45
HCFC1-201ENST00000310441 C9orf47Q6ZRZ4 202 aa12.24□□□□□ -0.45
HCFC1-201ENST00000310441 RAI1Q7Z5J4 1906 aaPredicted RBP12.23□□□□□ -0.45
HCFC1-201ENST00000310441 CLPSL2Q6UWE3 100 aa12.23□□□□□ -0.45
HCFC1-201ENST00000310441 HIGD1BQ9P298 99 aa12.23□□□□□ -0.45
HCFC1-201ENST00000310441 CPAMD8Q8IZJ3 1885 aa12.23□□□□□ -0.45
HCFC1-201ENST00000310441 TRAV4A0A0B4J268 109 aa12.23□□□□□ -0.45
HCFC1-201ENST00000310441 Q0VFX4 171 aa12.23□□□□□ -0.45
HCFC1-201ENST00000310441 A0A1B0GUS0 222 aa12.23□□□□□ -0.45
HCFC1-201ENST00000310441 IGLC7A0M8Q6 106 aa12.23□□□□□ -0.45
HCFC1-201ENST00000310441 PRR31Q5SQ13 230 aa12.23□□□□□ -0.45
HCFC1-201ENST00000310441 RUSC1-AS1Q66K80 236 aa12.23□□□□□ -0.45
HCFC1-201ENST00000310441 KIR2DL5BQ8NHK3 375 aa12.23□□□□□ -0.45
HCFC1-201ENST00000310441 PRR15LQ9BU68 103 aa12.23□□□□□ -0.45
HCFC1-201ENST00000310441 VWCEQ96DN2 955 aa12.22□□□□□ -0.45
HCFC1-201ENST00000310441 IGLC1P0CG04 106 aa12.22□□□□□ -0.45
HCFC1-201ENST00000310441 HIST2H2BCQ6DN03 193 aa12.22□□□□□ -0.45
HCFC1-201ENST00000310441 NDUFA1O15239 70 aa12.22□□□□□ -0.45
HCFC1-201ENST00000310441 C17orf58Q2M2W7 97 aa12.22□□□□□ -0.45
HCFC1-201ENST00000310441 SPANXB1Q9NS25 103 aaPredicted RBP12.22□□□□□ -0.45
HCFC1-201ENST00000310441 V9GYY9 64 aa12.22□□□□□ -0.45
HCFC1-201ENST00000310441 ZNF747Q9BV97 191 aa12.22□□□□□ -0.45
HCFC1-201ENST00000310441 DKK2Q9UBU2 259 aa12.22□□□□□ -0.45
HCFC1-201ENST00000310441 TRBV7-3A0A075B6L6 115 aa12.22□□□□□ -0.45
HCFC1-201ENST00000310441 IGKV1OR2-108A0A075B7D4 117 aa12.21□□□□□ -0.45
HCFC1-201ENST00000310441 Q96MF0 132 aa12.21□□□□□ -0.45
HCFC1-201ENST00000310441 C2CD3Q4AC94 2353 aa12.21□□□□□ -0.45
HCFC1-201ENST00000310441 UBE2AP49459 152 aa12.21□□□□□ -0.45
HCFC1-201ENST00000310441 SPART-AS1P0CW21 52 aa12.21□□□□□ -0.45
HCFC1-201ENST00000310441 ATP5EP56381 51 aaPredicted RBP12.21□□□□□ -0.45
HCFC1-201ENST00000310441 H3BT86 120 aa12.21□□□□□ -0.46
HCFC1-201ENST00000310441 WT1-ASQ06250 92 aa12.21□□□□□ -0.46
HCFC1-201ENST00000310441 U3KQE9 123 aa12.21□□□□□ -0.46
HCFC1-201ENST00000310441 CCL24O00175 119 aa12.2□□□□□ -0.46
HCFC1-201ENST00000310441 LRRK2Q5S007 2527 aa12.2□□□□□ -0.46
HCFC1-201ENST00000310441 C14orf177Q52M58 125 aa12.2□□□□□ -0.46
HCFC1-201ENST00000310441 G3V318 75 aa12.2□□□□□ -0.46
HCFC1-201ENST00000310441 IGKV1-6A0A0C4DH72 117 aa12.19□□□□□ -0.46
HCFC1-201ENST00000310441 AMTNQ6UX39 209 aa12.19□□□□□ -0.46
HCFC1-201ENST00000310441 TRBV12-3P01733 135 aa12.19□□□□□ -0.46
HCFC1-201ENST00000310441 LGALS9O00182 355 aa12.19□□□□□ -0.46
HCFC1-201ENST00000310441 MLANAQ16655 118 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 171.5 ms