RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 PSMB8P28062 276 aa6.44□□□□□ -1.38
VPS41-202ENST00000310301 FXYD2P54710 66 aa6.44□□□□□ -1.38
VPS41-202ENST00000310301 SVIPQ8NHG7 77 aa6.44□□□□□ -1.38
VPS41-202ENST00000310301 XCL2Q9UBD3 114 aa6.44□□□□□ -1.38
VPS41-202ENST00000310301 ICOSQ9Y6W8 199 aa6.44□□□□□ -1.38
VPS41-202ENST00000310301 CLPSL1A2RUU4 121 aa6.44□□□□□ -1.38
VPS41-202ENST00000310301 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.44□□□□□ -1.38
VPS41-202ENST00000310301 LINC01545Q5VT33 79 aa6.44□□□□□ -1.38
VPS41-202ENST00000310301 NDUFS5O43920 106 aa6.43□□□□□ -1.38
VPS41-202ENST00000310301 SHISA2Q6UWI4 295 aa6.43□□□□□ -1.38
VPS41-202ENST00000310301 HEATR1Q9H583 2144 aaKnown RBP6.43□□□□□ -1.38
VPS41-202ENST00000310301 HERV-K104P63124 156 aa6.43□□□□□ -1.38
VPS41-202ENST00000310301 ZNF833PQ6ZTB9 187 aa6.43□□□□□ -1.38
VPS41-202ENST00000310301 MUSTN1Q8IVN3 82 aa6.43□□□□□ -1.38
VPS41-202ENST00000310301 WFDC11Q8NEX6 87 aa6.43□□□□□ -1.38
VPS41-202ENST00000310301 ATP6V0E1O15342 81 aa6.43□□□□□ -1.38
VPS41-202ENST00000310301 Q9H8V8 135 aa6.43□□□□□ -1.38
VPS41-202ENST00000310301 DAD1P61803 113 aa6.43□□□□□ -1.38
VPS41-202ENST00000310301 LINC01620Q4KN68 170 aa6.43□□□□□ -1.38
VPS41-202ENST00000310301 RUSC1-AS1Q66K80 236 aa6.43□□□□□ -1.38
VPS41-202ENST00000310301 RNF183Q96D59 192 aa6.43□□□□□ -1.38
VPS41-202ENST00000310301 IL15RAQ13261 267 aa6.42□□□□□ -1.38
VPS41-202ENST00000310301 CEP192Q8TEP8 1941 aa6.42□□□□□ -1.38
VPS41-202ENST00000310301 GATA1P15976 413 aaPredicted RBP6.42□□□□□ -1.38
VPS41-202ENST00000310301 WT1-ASQ06250 92 aa6.42□□□□□ -1.38
VPS41-202ENST00000310301 DEFB105AQ8NG35 78 aa6.42□□□□□ -1.38
VPS41-202ENST00000310301 A4D1N5 150 aa6.42□□□□□ -1.38
VPS41-202ENST00000310301 ELANEP08246 267 aa6.42□□□□□ -1.38
VPS41-202ENST00000310301 LMO1P25800 156 aa6.42□□□□□ -1.38
VPS41-202ENST00000310301 C17orf77Q96MU5 243 aa6.42□□□□□ -1.38
VPS41-202ENST00000310301 BBC3Q96PG8 261 aaPredicted RBP6.42□□□□□ -1.38
VPS41-202ENST00000310301 PRR20EP86478 221 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 PRR20CP86479 221 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 PRR20DP86480 221 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 PRR20BP86481 221 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 PRR20AP86496 221 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 DUX4L9Q6RFH8 374 aaPredicted RBP6.41□□□□□ -1.38
VPS41-202ENST00000310301 PLXND1Q9Y4D7 1925 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 HIST2H2BCQ6DN03 193 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 Q8NFD4 153 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 GTF3C1Q12789 2109 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 DEFB112Q30KQ8 113 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 DYNAPQ8N1N2 210 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 TPSG1Q9NRR2 321 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 INAFM1C9JVW0 142 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 ZNF134P52741 427 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 C17orf58Q2M2W7 97 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 SPG11Q96JI7 2443 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 LY6G6DO95868 133 aa6.41□□□□□ -1.38
VPS41-202ENST00000310301 ANKHD1Q8IWZ3 2542 aaKnown RBP6.4□□□□□ -1.38
VPS41-202ENST00000310301 CLPSL2Q6UWE3 100 aa6.4□□□□□ -1.38
VPS41-202ENST00000310301 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.4□□□□□ -1.385e-8■■■■□ 26.3
VPS41-202ENST00000310301 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.4□□□□□ -1.38
VPS41-202ENST00000310301 IGKV2-29A2NJV5 120 aaPredicted RBP6.4□□□□□ -1.38
VPS41-202ENST00000310301 RHOHQ15669 191 aa6.4□□□□□ -1.38
VPS41-202ENST00000310301 TTTY13Q9BZ97 58 aa6.4□□□□□ -1.38
VPS41-202ENST00000310301 MED12Q93074 2177 aa6.4□□□□□ -1.39
VPS41-202ENST00000310301 G3V318 75 aa6.4□□□□□ -1.39
VPS41-202ENST00000310301 GNRH2O43555 120 aa6.4□□□□□ -1.39
VPS41-202ENST00000310301 CRYGBP07316 175 aa6.4□□□□□ -1.39
VPS41-202ENST00000310301 KIAA2026Q5HYC2 2103 aa6.4□□□□□ -1.39
VPS41-202ENST00000310301 WDR86Q86TI4 376 aa6.4□□□□□ -1.39
VPS41-202ENST00000310301 HIGD1BQ9P298 99 aa6.4□□□□□ -1.39
VPS41-202ENST00000310301 ZFP2Q6ZN57 461 aa6.4□□□□□ -1.39
VPS41-202ENST00000310301 ATP6V0E2Q8NHE4 81 aa6.4□□□□□ -1.39
VPS41-202ENST00000310301 PLA2G2EQ9NZK7 142 aa6.4□□□□□ -1.39
VPS41-202ENST00000310301 SRSF2Q01130 221 aaKnown RBP6.39□□□□□ -1.39
VPS41-202ENST00000310301 IGHV4-28A0A0C4DH34 117 aa6.39□□□□□ -1.39
VPS41-202ENST00000310301 F5H768 121 aa6.39□□□□□ -1.39
VPS41-202ENST00000310301 LINC01619G3V211 115 aa6.39□□□□□ -1.39
VPS41-202ENST00000310301 SLC25A29Q8N8R3 303 aa6.39□□□□□ -1.39
VPS41-202ENST00000310301 IGHV4-4A0A075B6R2 117 aa6.39□□□□□ -1.39
VPS41-202ENST00000310301 TRBV10-2A0A0K0K1G8 114 aa6.39□□□□□ -1.39
VPS41-202ENST00000310301 FOXE3Q13461 319 aa6.39□□□□□ -1.39
VPS41-202ENST00000310301 PTH2Q96A98 100 aa6.39□□□□□ -1.39
VPS41-202ENST00000310301 CHKB-CPT1BH3BT56 60 aa6.39□□□□□ -1.39
VPS41-202ENST00000310301 C9orf66Q5T8R8 295 aa6.39□□□□□ -1.39
VPS41-202ENST00000310301 RPL39LQ96EH5 51 aaKnown RBP6.39□□□□□ -1.39
VPS41-202ENST00000310301 CHD3Q12873 2000 aaKnown RBP6.39□□□□□ -1.39
VPS41-202ENST00000310301 LOXP28300 417 aaPredicted RBP6.38□□□□□ -1.39
VPS41-202ENST00000310301 COX7B2Q8TF08 81 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 PCDH15Q96QU1 1955 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 SPRY2O43597 315 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 Q6ZR03 302 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 BAALCQ8WXS3 180 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 RBAKDNA6NC62 111 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 C15orf65H3BRN8 121 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 IL17DQ8TAD2 202 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 CLEC2BQ92478 149 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 NAV2Q8IVL1 2488 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 NDUFA4O00483 81 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 YLPM1P49750 1951 aaKnown RBP6.38□□□□□ -1.39
VPS41-202ENST00000310301 PHF3Q92576 2039 aaKnown RBP6.38□□□□□ -1.39
VPS41-202ENST00000310301 A0A096LPF7 62 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 H0YGX0 51 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 LGALS9O00182 355 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 IGHV4-31P0DP07 118 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 XCL1P47992 114 aa6.38□□□□□ -1.39
VPS41-202ENST00000310301 MUC22E2RYF6 1773 aaPredicted RBP6.37□□□□□ -1.39
VPS41-202ENST00000310301 TRAV4A0A0B4J268 109 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms