RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 CIDEAO60543 219 aa10.21□□□□□ -0.78
CCDC13-201ENST00000310232 S100A4P26447 101 aaKnown RBP10.21□□□□□ -0.78
CCDC13-201ENST00000310232 RPL39P62891 51 aaKnown RBP10.21□□□□□ -0.78
CCDC13-201ENST00000310232 NDUFS8O00217 210 aa10.2□□□□□ -0.78
CCDC13-201ENST00000310232 ANXA2RQ3ZCQ2 193 aa10.2□□□□□ -0.78
CCDC13-201ENST00000310232 Q6ZS46 218 aa10.2□□□□□ -0.78
CCDC13-201ENST00000310232 NEXN-AS1Q8NBZ9 246 aa10.2□□□□□ -0.78
CCDC13-201ENST00000310232 TIMD4Q96H15 378 aa10.2□□□□□ -0.78
CCDC13-201ENST00000310232 HOXA3O43365 443 aaPredicted RBP10.2□□□□□ -0.78
CCDC13-201ENST00000310232 IGHV3-11P01762 117 aa10.2□□□□□ -0.78
CCDC13-201ENST00000310232 PLNP26678 52 aa10.2□□□□□ -0.78
CCDC13-201ENST00000310232 SAA4P35542 130 aa10.2□□□□□ -0.78
CCDC13-201ENST00000310232 SRSF2Q01130 221 aaKnown RBP10.2□□□□□ -0.78
CCDC13-201ENST00000310232 SRSF9Q13242 221 aaKnown RBP eCLIP10.2□□□□□ -0.78
CCDC13-201ENST00000310232 IGF2-ASQ6U949 168 aa10.2□□□□□ -0.78
CCDC13-201ENST00000310232 SYT8Q8NBV8 401 aa10.2□□□□□ -0.78
CCDC13-201ENST00000310232 NACAE9PAV3 2078 aa10.2□□□□□ -0.78
CCDC13-201ENST00000310232 RNASE4P34096 147 aaKnown RBP10.2□□□□□ -0.78
CCDC13-201ENST00000310232 RAB9AP51151 201 aa10.2□□□□□ -0.78
CCDC13-201ENST00000310232 AJUBAQ96IF1 538 aa10.2□□□□□ -0.78
CCDC13-201ENST00000310232 FAM110DQ8TAY7 271 aaPredicted RBP10.19□□□□□ -0.78
CCDC13-201ENST00000310232 METTL26Q96S19 204 aa10.19□□□□□ -0.78
CCDC13-201ENST00000310232 SLC50A1Q9BRV3 221 aa10.19□□□□□ -0.78
CCDC13-201ENST00000310232 NOTCH3Q9UM47 2321 aa10.19□□□□□ -0.78
CCDC13-201ENST00000310232 GPHB5Q86YW7 130 aa10.19□□□□□ -0.78
CCDC13-201ENST00000310232 A6NJY4 79 aa10.18□□□□□ -0.78
CCDC13-201ENST00000310232 M0R1W7 72 aa10.18□□□□□ -0.78
CCDC13-201ENST00000310232 TSPEAR-AS2P59090 65 aa10.18□□□□□ -0.78
CCDC13-201ENST00000310232 SPATA25Q9BR10 227 aa10.18□□□□□ -0.78
CCDC13-201ENST00000310232 PHLDA3Q9Y5J5 127 aa10.18□□□□□ -0.78
CCDC13-201ENST00000310232 A0A087WWL8 130 aa10.18□□□□□ -0.78
CCDC13-201ENST00000310232 C11orf86A6NJI1 115 aa10.18□□□□□ -0.78
CCDC13-201ENST00000310232 TSPAN13O95857 204 aa10.18□□□□□ -0.78
CCDC13-201ENST00000310232 MT-ATP8P03928 68 aa10.18□□□□□ -0.78
CCDC13-201ENST00000310232 CRYGDP07320 174 aa10.18□□□□□ -0.78
CCDC13-201ENST00000310232 TOMM6Q96B49 74 aa10.18□□□□□ -0.78
CCDC13-201ENST00000310232 OPRPNQ99935 248 aaPredicted RBP10.18□□□□□ -0.78
CCDC13-201ENST00000310232 IGHV3-64A0A075B6Q5 118 aa10.17□□□□□ -0.78
CCDC13-201ENST00000310232 RBAKDNA6NC62 111 aa10.17□□□□□ -0.78
CCDC13-201ENST00000310232 TSHBP01222 138 aa10.17□□□□□ -0.78
CCDC13-201ENST00000310232 ZFAND2AQ8N6M9 145 aa10.17□□□□□ -0.78
CCDC13-201ENST00000310232 ATP6V0BQ99437 205 aa10.17□□□□□ -0.78
CCDC13-201ENST00000310232 TMEM95Q3KNT9 176 aa10.17□□□□□ -0.78
CCDC13-201ENST00000310232 C9orf47Q6ZRZ4 202 aa10.17□□□□□ -0.78
CCDC13-201ENST00000310232 KIR2DL4Q99706 377 aa10.17□□□□□ -0.78
CCDC13-201ENST00000310232 SCGB2A1O75556 95 aa10.16□□□□□ -0.78
CCDC13-201ENST00000310232 CKS1BP61024 79 aa10.16□□□□□ -0.78
CCDC13-201ENST00000310232 FOXI1Q12951 378 aa10.16□□□□□ -0.78
CCDC13-201ENST00000310232 BRD3OSQ6XYD6 125 aa10.16□□□□□ -0.78
CCDC13-201ENST00000310232 H7C2G1 150 aa10.16□□□□□ -0.78
CCDC13-201ENST00000310232 EBI3Q14213 229 aa10.16□□□□□ -0.78
CCDC13-201ENST00000310232 CFAP126Q5VTH2 177 aa10.16□□□□□ -0.78
CCDC13-201ENST00000310232 CDIP1Q9H305 208 aa10.16□□□□□ -0.78
CCDC13-201ENST00000310232 UBTD1Q9HAC8 227 aa10.16□□□□□ -0.78
CCDC13-201ENST00000310232 ITPR1Q14643 2758 aa10.16□□□□□ -0.78
CCDC13-201ENST00000310232 TAL2Q16559 108 aa10.15□□□□□ -0.78
CCDC13-201ENST00000310232 SIRPDQ9H106 197 aa10.15□□□□□ -0.78
CCDC13-201ENST00000310232 TP53TG1Q9Y2A0 90 aa10.15□□□□□ -0.78
CCDC13-201ENST00000310232 TRAV26-1A0A087WT03 109 aa10.15□□□□□ -0.78
CCDC13-201ENST00000310232 J3QR89 54 aa10.15□□□□□ -0.78
CCDC13-201ENST00000310232 FOXC1Q12948 553 aa10.15□□□□□ -0.78
CCDC13-201ENST00000310232 RNASE3P12724 160 aaKnown RBP10.14□□□□□ -0.79
CCDC13-201ENST00000310232 COX6B1P14854 86 aa10.14□□□□□ -0.79
CCDC13-201ENST00000310232 XGP55808 180 aa10.14□□□□□ -0.79
CCDC13-201ENST00000310232 EEF1AKMT3Q96AZ1 226 aa10.14□□□□□ -0.79
CCDC13-201ENST00000310232 CARD19Q96LW7 228 aa10.14□□□□□ -0.79
CCDC13-201ENST00000310232 TRAV12-1A0A0B4J245 112 aa10.14□□□□□ -0.79
CCDC13-201ENST00000310232 TCL1BO95988 128 aa10.14□□□□□ -0.79
CCDC13-201ENST00000310232 ORMDL2Q53FV1 153 aa10.14□□□□□ -0.79
CCDC13-201ENST00000310232 FAM74A4Q5TZK3 123 aa10.14□□□□□ -0.79
CCDC13-201ENST00000310232 TMEM190Q8WZ59 177 aa10.14□□□□□ -0.79
CCDC13-201ENST00000310232 DPH3P1Q9H4G8 78 aa10.14□□□□□ -0.79
CCDC13-201ENST00000310232 IGLV4-69A0A075B6H9 119 aa10.13□□□□□ -0.79
CCDC13-201ENST00000310232 IGKV3-20P01619 116 aa10.13□□□□□ -0.79
CCDC13-201ENST00000310232 LY6EQ16553 131 aa10.13□□□□□ -0.79
CCDC13-201ENST00000310232 TMEM170BQ5T4T1 132 aa10.13□□□□□ -0.79
CCDC13-201ENST00000310232 MRAP2Q96G30 205 aa10.13□□□□□ -0.79
CCDC13-201ENST00000310232 ZNF580Q9UK33 172 aa10.13□□□□□ -0.79
CCDC13-201ENST00000310232 USP9YO00507 2555 aaPredicted RBP10.13□□□□□ -0.79
CCDC13-201ENST00000310232 IGHV4-4A0A075B6R2 117 aa10.13□□□□□ -0.79
CCDC13-201ENST00000310232 ADORA2A-AS1P86434 159 aa10.13□□□□□ -0.79
CCDC13-201ENST00000310232 C11orf71Q6IPW1 123 aa10.13□□□□□ -0.79
CCDC13-201ENST00000310232 RAX2Q96IS3 184 aa10.13□□□□□ -0.79
CCDC13-201ENST00000310232 FLNCQ14315 2725 aa10.13□□□□□ -0.79
CCDC13-201ENST00000310232 GATA3P23771 443 aa10.13□□□□□ -0.79
CCDC13-201ENST00000310232 ASIPP42127 132 aa10.13□□□□□ -0.79
CCDC13-201ENST00000310232 CRIP2P52943 208 aaPredicted RBP10.13□□□□□ -0.79
CCDC13-201ENST00000310232 ITLN2Q8WWU7 325 aaPredicted RBP10.13□□□□□ -0.79
CCDC13-201ENST00000310232 C1QTNF4Q9BXJ3 329 aa10.13□□□□□ -0.79
CCDC13-201ENST00000310232 POLQO75417 2590 aa10.12□□□□□ -0.79
CCDC13-201ENST00000310232 F5H697 171 aa10.12□□□□□ -0.79
CCDC13-201ENST00000310232 CD7P09564 240 aa10.12□□□□□ -0.79
CCDC13-201ENST00000310232 DLX4Q92988 240 aaPredicted RBP10.12□□□□□ -0.79
CCDC13-201ENST00000310232 ZNF256Q9Y2P7 627 aaPredicted RBP10.12□□□□□ -0.79
CCDC13-201ENST00000310232 CENPVL3A0A0U1RRI6 287 aa10.12□□□□□ -0.79
CCDC13-201ENST00000310232 SPINK8P0C7L1 97 aa10.12□□□□□ -0.79
CCDC13-201ENST00000310232 ZNRF2Q8NHG8 242 aa10.12□□□□□ -0.79
CCDC13-201ENST00000310232 A0A1B0GV72 72 aa10.11□□□□□ -0.79
CCDC13-201ENST00000310232 UBE2D1P51668 147 aa10.11□□□□□ -0.79
CCDC13-201ENST00000310232 TCF15Q12870 199 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms