RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 ANKRD17O75179 2603 aaKnown RBP3.17□□□□□ -1.9
USH2A-201ENST00000307340 LINC00158P58513 81 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 WDR86Q86TI4 376 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 ZMAT4Q9H898 229 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 FAM216BQ8N7L0 139 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 NKAPP1Q8N9T2 125 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 TECTAO75443 2155 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 BCE1O60756 84 aa3.17□□□□□ -1.9
USH2A-201ENST00000307340 P0C879 139 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 LINC00173Q6ZV60 143 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 C1orf159Q96HA4 380 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 SS18L2Q9UHA2 77 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 IGKV2D-26A0A0A0MRZ7 120 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 CGB1A6NKQ9 187 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 NDUFA12Q9UI09 145 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 SELENOKQ9Y6D0 94 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 IGLC7A0M8Q6 106 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 C17orf58Q2M2W7 97 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 TP53TG1Q9Y2A0 90 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 FAM208BQ5VWN6 2430 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 ADCYAP1P18509 176 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 TRBV12-3P01733 135 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 OTOGLQ3ZCN5 2332 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 TRBV27A0A0K0K1C4 114 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 K7EIM0 57 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 BPTFQ12830 3046 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 TRAV8-3A0A0A6YYJ7 113 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 H7C2G1 150 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 NRACQ8N912 160 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 GP9P14770 177 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 CCL18P55774 89 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 ARTNQ5T4W7 220 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 A0A0U1RQV1 116 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 C5orf24Q7Z6I8 188 aa3.16□□□□□ -1.9
USH2A-201ENST00000307340 MRPL36Q9P0J6 103 aaKnown RBP3.16□□□□□ -1.9
USH2A-201ENST00000307340 WI2-2373I1.2A0A1W2PRP0 233 aa3.15□□□□□ -1.9
USH2A-201ENST00000307340 EBI3Q14213 229 aa3.15□□□□□ -1.9
USH2A-201ENST00000307340 HIVEP3Q5T1R4 2406 aa3.15□□□□□ -1.9
USH2A-201ENST00000307340 IGLV1-47P01700 117 aa3.15□□□□□ -1.9
USH2A-201ENST00000307340 IGF2BP2-AS1Q96M15 143 aa3.15□□□□□ -1.9
USH2A-201ENST00000307340 IGHV4OR15-8A0A075B7B6 117 aa3.15□□□□□ -1.9
USH2A-201ENST00000307340 A0A087WW49 117 aa3.15□□□□□ -1.9
USH2A-201ENST00000307340 TRBV30A0A0K0K1B3 111 aa3.15□□□□□ -1.9
USH2A-201ENST00000307340 ST6GALNAC6Q969X2 333 aa3.15□□□□□ -1.9
USH2A-201ENST00000307340 HTN1P15515 57 aa3.15□□□□□ -1.9
USH2A-201ENST00000307340 C9orf153Q5TBE3 101 aa3.15□□□□□ -1.9
USH2A-201ENST00000307340 K7EQD1 137 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 DUX4L9Q6RFH8 374 aaPredicted RBP3.15□□□□□ -1.91
USH2A-201ENST00000307340 RPL37AP8A6NKH3 93 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 IGHV3-7P01780 117 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 RNF144BQ7Z419 303 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 CFC1BP0CG36 223 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 CFC1P0CG37 223 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 PYYP10082 97 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 PIP4P2Q8N4L2 257 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 ANKRD11Q6UB99 2663 aaPredicted RBP3.15□□□□□ -1.91
USH2A-201ENST00000307340 SRCAPQ6ZRS2 3230 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 FAM201AQ5SY85 155 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 COLQQ9Y215 455 aaPredicted RBP3.15□□□□□ -1.91
USH2A-201ENST00000307340 K7ERS5 55 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 SRSF3P84103 164 aaKnown RBP3.15□□□□□ -1.91
USH2A-201ENST00000307340 EXOC3-AS1Q8N2X6 119 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 IGHV3OR16-10A0A075B7F0 116 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 TAX1BP3O14907 124 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 EFNA2O43921 213 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 TIRAPP58753 221 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 NFE4Q86UQ8 179 aa3.15□□□□□ -1.91
USH2A-201ENST00000307340 TMEM219Q86XT9 240 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 CD33P20138 364 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 WT1-ASQ06250 92 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 PRR30Q53SZ7 412 aaPredicted RBP3.14□□□□□ -1.91
USH2A-201ENST00000307340 NAA38Q9BRA0 125 aaKnown RBP3.14□□□□□ -1.91
USH2A-201ENST00000307340 IGHV3-64DA0A0J9YX35 117 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 PRR15LQ9BU68 103 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 U3KQK5 164 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 A0A087WV48 116 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 A0A1B0GXF2 115 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 USP17L23D6RBM5 183 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 DAND5Q8N907 189 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 KLK15Q9H2R5 256 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 IGKV1D-8A0A087WSZ0 117 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 TRBV6-5A0A0K0K1A5 114 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 TRBV10-3A0A0K0K1G6 114 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 RBM3P98179 157 aaKnown RBP3.14□□□□□ -1.91
USH2A-201ENST00000307340 TRANK1O15050 2925 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 TRBV10-2A0A0K0K1G8 114 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 KNCNA6PVL3 124 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 SNAI2O43623 268 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 CELA3BP08861 270 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 TMSB15BA0A087X1C1 80 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 MRPL51Q4U2R6 128 aaKnown RBP3.14□□□□□ -1.91
USH2A-201ENST00000307340 CACNA1AO00555 2505 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 I3L2K1 104 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 C12orf74Q32Q52 190 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 C19orf71A6NCJ1 209 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 K7EN84 100 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 LRRK2Q5S007 2527 aa3.14□□□□□ -1.91
USH2A-201ENST00000307340 GAGE2AQ6NT46 116 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 C11orf1Q9H5F2 150 aa3.13□□□□□ -1.91
USH2A-201ENST00000307340 TRBV6-4A0A1B0GX49 114 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms