RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 TMEM256Q8N2U0 113 aa12.83□□□□□ -0.35
KRT28-201ENST00000306658 LINC01587Q99440 93 aa12.83□□□□□ -0.35
KRT28-201ENST00000306658 C1QTNF4Q9BXJ3 329 aa12.83□□□□□ -0.35
KRT28-201ENST00000306658 IGHV3-16A0A0C4DH30 117 aa12.83□□□□□ -0.36
KRT28-201ENST00000306658 RPL35AP18077 110 aaKnown RBP12.83□□□□□ -0.36
KRT28-201ENST00000306658 KIAA1644Q3SXP7 199 aa12.83□□□□□ -0.36
KRT28-201ENST00000306658 SMIM15Q7Z3B0 74 aa12.83□□□□□ -0.36
KRT28-201ENST00000306658 LINC00467Q9BRT7 94 aa12.83□□□□□ -0.36
KRT28-201ENST00000306658 TMEM191AQ9H0A3 160 aa12.83□□□□□ -0.36
KRT28-201ENST00000306658 MSRB1Q9NZV6 116 aa12.83□□□□□ -0.36
KRT28-201ENST00000306658 TP53TG3Q9ULZ0 132 aa12.83□□□□□ -0.36
KRT28-201ENST00000306658 TMEM208Q9BTX3 173 aa12.82□□□□□ -0.36
KRT28-201ENST00000306658 HTN1P15515 57 aa12.81□□□□□ -0.36
KRT28-201ENST00000306658 SNRPEP62304 92 aaKnown RBP12.81□□□□□ -0.36
KRT28-201ENST00000306658 LOC102724200A0A096LPH7 203 aaPredicted RBP12.8□□□□□ -0.36
KRT28-201ENST00000306658 M0R381 172 aa12.8□□□□□ -0.36
KRT28-201ENST00000306658 FAM104BQ5XKR9 115 aa12.8□□□□□ -0.36
KRT28-201ENST00000306658 MDFICQ9P1T7 246 aa12.8□□□□□ -0.36
KRT28-201ENST00000306658 C5orf52A6NGY3 159 aa12.8□□□□□ -0.36
KRT28-201ENST00000306658 SRIP30626 198 aa12.8□□□□□ -0.36
KRT28-201ENST00000306658 C9orf85Q96MD7 179 aa12.8□□□□□ -0.36
KRT28-201ENST00000306658 ZMAT5Q9UDW3 170 aaKnown RBP12.8□□□□□ -0.36
KRT28-201ENST00000306658 C1orf158Q8N1D5 194 aa12.79□□□□□ -0.36
KRT28-201ENST00000306658 GIG44P09565 113 aaPredicted RBP12.78□□□□□ -0.36
KRT28-201ENST00000306658 OXLD1Q5BKU9 147 aa12.78□□□□□ -0.36
KRT28-201ENST00000306658 DMRTA1Q5VZB9 504 aa12.78□□□□□ -0.36
KRT28-201ENST00000306658 AMN1Q8IY45 258 aa12.78□□□□□ -0.36
KRT28-201ENST00000306658 SYT8Q8NBV8 401 aa12.78□□□□□ -0.36
KRT28-201ENST00000306658 ALKBH7Q9BT30 221 aaPredicted RBP12.78□□□□□ -0.36
KRT28-201ENST00000306658 CSTL1Q9H114 145 aa12.78□□□□□ -0.36
KRT28-201ENST00000306658 GOLT1BQ9Y3E0 138 aa12.78□□□□□ -0.36
KRT28-201ENST00000306658 NXPH4O95158 308 aa12.77□□□□□ -0.36
KRT28-201ENST00000306658 EVI2AP22794 236 aa12.77□□□□□ -0.36
KRT28-201ENST00000306658 OR10J3Q5JRS4 329 aa12.77□□□□□ -0.36
KRT28-201ENST00000306658 IGHV3OR16-12A0A075B7B8 117 aa12.77□□□□□ -0.37
KRT28-201ENST00000306658 SPRY2O43597 315 aa12.77□□□□□ -0.37
KRT28-201ENST00000306658 ZNF415Q09FC8 603 aa12.77□□□□□ -0.37
KRT28-201ENST00000306658 Q0VG73 95 aa12.77□□□□□ -0.37
KRT28-201ENST00000306658 COA6Q5JTJ3 125 aaKnown RBP12.77□□□□□ -0.37
KRT28-201ENST00000306658 MUC4Q99102 2169 aa12.76□□□□□ -0.37
KRT28-201ENST00000306658 AP1S3Q96PC3 154 aa12.76□□□□□ -0.37
KRT28-201ENST00000306658 LOC105371267A0A1B0GV96 52 aa12.75□□□□□ -0.37
KRT28-201ENST00000306658 RAB4AP20338 218 aa12.75□□□□□ -0.37
KRT28-201ENST00000306658 HOXA5P20719 270 aa12.75□□□□□ -0.37
KRT28-201ENST00000306658 MRPL51Q4U2R6 128 aaKnown RBP12.75□□□□□ -0.37
KRT28-201ENST00000306658 BAGE3Q86Y29 109 aa12.75□□□□□ -0.37
KRT28-201ENST00000306658 CSNK1G2-AS1Q8NCQ2 148 aa12.75□□□□□ -0.37
KRT28-201ENST00000306658 UBE2CO00762 179 aa12.74□□□□□ -0.37
KRT28-201ENST00000306658 EGFEM1PQ0D2K5 195 aa12.74□□□□□ -0.37
KRT28-201ENST00000306658 ORMDL3Q8N138 153 aa12.74□□□□□ -0.37
KRT28-201ENST00000306658 PPBPP02775 128 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 PRM2P04554 102 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 CKS2P33552 79 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 C18orf32Q8TCD1 76 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 RNF185Q96GF1 192 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 RCHY1Q96PM5 261 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 SPXQ9BT56 116 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 DPH3P1Q9H4G8 78 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 KIR2DL5BA0A0G2JN68 375 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 KIR2DL5BA0A0G2JPC4 375 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 D6R8Y8 96 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 SMIM17P0DL12 118 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 ZNF876PQ49A33 203 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 KIR2DL5AQ8N109 375 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 C14orf178Q8N769 122 aaPredicted RBP12.73□□□□□ -0.37
KRT28-201ENST00000306658 KIR2DL5BQ8NHK3 375 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 GSN-AS1Q9NRJ2 163 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 U3KQK5 164 aa12.73□□□□□ -0.37
KRT28-201ENST00000306658 APOC4P55056 127 aa12.72□□□□□ -0.37
KRT28-201ENST00000306658 C11orf72Q8NBR9 251 aa12.72□□□□□ -0.37
KRT28-201ENST00000306658 MDFIQ99750 246 aa12.72□□□□□ -0.37
KRT28-201ENST00000306658 M0R2P5 195 aa12.71□□□□□ -0.37
KRT28-201ENST00000306658 AZU1P20160 251 aa12.71□□□□□ -0.37
KRT28-201ENST00000306658 PIK3CD-AS1Q5SR53 167 aa12.71□□□□□ -0.37
KRT28-201ENST00000306658 ZNF705AQ6ZN79 300 aaPredicted RBP12.71□□□□□ -0.37
KRT28-201ENST00000306658 TMEM263Q8WUH6 116 aaKnown RBP12.71□□□□□ -0.37
KRT28-201ENST00000306658 PTH2Q96A98 100 aa12.71□□□□□ -0.37
KRT28-201ENST00000306658 PRELID3AQ96N28 172 aa12.71□□□□□ -0.37
KRT28-201ENST00000306658 KRTAP10-11P60412 298 aa12.7□□□□□ -0.38
KRT28-201ENST00000306658 PKD1L1Q8TDX9 2849 aa12.7□□□□□ -0.38
KRT28-201ENST00000306658 S100A2P29034 98 aa12.7□□□□□ -0.38
KRT28-201ENST00000306658 HIST3H2BBQ8N257 126 aa12.7□□□□□ -0.38
KRT28-201ENST00000306658 RNASE8Q8TDE3 154 aaKnown RBP12.7□□□□□ -0.38
KRT28-201ENST00000306658 LAMTOR2Q9Y2Q5 125 aa12.7□□□□□ -0.38
KRT28-201ENST00000306658 SERF1AO75920 110 aa12.69□□□□□ -0.38
KRT28-201ENST00000306658 IGHV4-30-4P0DP06 118 aa12.69□□□□□ -0.38
KRT28-201ENST00000306658 IQCJQ1A5X6 159 aa12.69□□□□□ -0.38
KRT28-201ENST00000306658 RRN3P1Q2M238 152 aa12.69□□□□□ -0.38
KRT28-201ENST00000306658 MRAP2Q96G30 205 aa12.69□□□□□ -0.38
KRT28-201ENST00000306658 C16orf74Q96GX8 76 aa12.69□□□□□ -0.38
KRT28-201ENST00000306658 PDZD11Q5EBL8 140 aa12.68□□□□□ -0.38
KRT28-201ENST00000306658 JPT2Q9H910 190 aa12.68□□□□□ -0.38
KRT28-201ENST00000306658 KIF25-AS1Q9Y6Z4 181 aa12.68□□□□□ -0.38
KRT28-201ENST00000306658 SMKR1H3BMG3 65 aa12.67□□□□□ -0.38
KRT28-201ENST00000306658 MGPP08493 103 aa12.67□□□□□ -0.38
KRT28-201ENST00000306658 NDUFAF3Q9BU61 184 aa12.67□□□□□ -0.38
KRT28-201ENST00000306658 A8MWV9 139 aa12.67□□□□□ -0.38
KRT28-201ENST00000306658 G3V4G9 280 aa12.67□□□□□ -0.38
KRT28-201ENST00000306658 NCR2O95944 276 aa12.67□□□□□ -0.38
KRT28-201ENST00000306658 ESDP10768 282 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms