RNA–Protein interactions for RNA: ENST00000304514.11

RGPD3-201, Transcript of RANBP2-like and GRIP domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RGPD3, Length 5,510 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3-201ENST00000304514 H7C1H1 209 aa5.35□□□□□ -1.55
RGPD3-201ENST00000304514 KRTAP1-3Q8IUG1 177 aa5.35□□□□□ -1.55
RGPD3-201ENST00000304514 AP1S3Q96PC3 154 aa5.35□□□□□ -1.55
RGPD3-201ENST00000304514 MUC4Q99102 2169 aa5.35□□□□□ -1.55
RGPD3-201ENST00000304514 K7EP34 96 aa5.35□□□□□ -1.55
RGPD3-201ENST00000304514 K7EQG2 157 aa5.35□□□□□ -1.55
RGPD3-201ENST00000304514 PRSS1P07477 247 aa5.35□□□□□ -1.55
RGPD3-201ENST00000304514 OR4C5Q8NGB2 326 aa5.35□□□□□ -1.55
RGPD3-201ENST00000304514 RPL11P62913 178 aaKnown RBP5.35□□□□□ -1.55
RGPD3-201ENST00000304514 TM2D2Q9BX73 214 aa5.35□□□□□ -1.55
RGPD3-201ENST00000304514 CHTOPQ9Y3Y2 248 aaKnown RBP5.35□□□□□ -1.55
RGPD3-201ENST00000304514 TRBV25-1A0A075B6N4 114 aa5.35□□□□□ -1.55
RGPD3-201ENST00000304514 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.35□□□□□ -1.55
RGPD3-201ENST00000304514 VAMP3Q15836 100 aa5.35□□□□□ -1.55
RGPD3-201ENST00000304514 MGPP08493 103 aa5.34□□□□□ -1.55
RGPD3-201ENST00000304514 RBMY1A1P0DJD3 496 aaKnown RBP5.34□□□□□ -1.55
RGPD3-201ENST00000304514 RBMY1CP0DJD4 496 aa5.34□□□□□ -1.55
RGPD3-201ENST00000304514 RBMY1FQ15415 496 aaKnown RBP5.34□□□□□ -1.55
RGPD3-201ENST00000304514 TMEM160Q9NX00 188 aa5.34□□□□□ -1.55
RGPD3-201ENST00000304514 A8MTW9 85 aa5.34□□□□□ -1.55
RGPD3-201ENST00000304514 FXYD2P54710 66 aa5.34□□□□□ -1.55
RGPD3-201ENST00000304514 AMTNQ6UX39 209 aa5.34□□□□□ -1.55
RGPD3-201ENST00000304514 CSTL1Q9H114 145 aa5.34□□□□□ -1.55
RGPD3-201ENST00000304514 ZNF256Q9Y2P7 627 aaPredicted RBP5.34□□□□□ -1.55
RGPD3-201ENST00000304514 URB1O60287 2271 aaKnown RBP5.34□□□□□ -1.55
RGPD3-201ENST00000304514 IGIPA6NJ69 53 aa5.34□□□□□ -1.55
RGPD3-201ENST00000304514 POLR2KP53803 58 aaKnown RBP5.34□□□□□ -1.55
RGPD3-201ENST00000304514 JPT2Q9H910 190 aa5.34□□□□□ -1.55
RGPD3-201ENST00000304514 PRB1P04280 392 aa5.34□□□□□ -1.55
RGPD3-201ENST00000304514 CDKN1BP46527 198 aa5.34□□□□□ -1.55
RGPD3-201ENST00000304514 RIPPLY3P57055 190 aa5.34□□□□□ -1.55
RGPD3-201ENST00000304514 ZC2HC1BQ5TFG8 222 aa5.34□□□□□ -1.55
RGPD3-201ENST00000304514 EDA2RQ9HAV5 297 aa5.34□□□□□ -1.55
RGPD3-201ENST00000304514 UTP20O75691 2785 aaKnown RBP5.34□□□□□ -1.56
RGPD3-201ENST00000304514 ANKHD1Q8IWZ3 2542 aaKnown RBP5.34□□□□□ -1.56
RGPD3-201ENST00000304514 TRAV12-3A0A0B4J271 114 aa5.34□□□□□ -1.56
RGPD3-201ENST00000304514 A0A1W2PPM0 123 aa5.34□□□□□ -1.56
RGPD3-201ENST00000304514 F8VRH5 84 aa5.34□□□□□ -1.56
RGPD3-201ENST00000304514 COX6B1P14854 86 aa5.34□□□□□ -1.56
RGPD3-201ENST00000304514 WFDC12Q8WWY7 111 aa5.34□□□□□ -1.56
RGPD3-201ENST00000304514 TRBV7-3A0A075B6L6 115 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 TRBV6-5A0A0K0K1A5 114 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 TAL2Q16559 108 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 C18orf65Q6ZTR6 163 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 SCGB3A1Q96QR1 104 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 IGKV3-7A0A075B6H7 116 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 PPP1R17O96001 155 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 C2orf66Q6UXQ4 117 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 ZFP2Q6ZN57 461 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 UBE2E2Q96LR5 201 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 BBC3Q96PG8 261 aaPredicted RBP5.33□□□□□ -1.56
RGPD3-201ENST00000304514 NEGR1Q7Z3B1 354 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 CST9LQ9H4G1 147 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 CNOT1A5YKK6 2376 aaKnown RBP5.33□□□□□ -1.56
RGPD3-201ENST00000304514 PCNX1Q96RV3 2341 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 ELANEP08246 267 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 LRRC75A-AS1Q8N1F1 130 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 ZNF843Q8N446 348 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 MAPK1IP1LQ8NDC0 245 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 MDFICQ9P1T7 246 aa5.33□□□□□ -1.56
RGPD3-201ENST00000304514 MYMXA0A1B0GTQ4 84 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 HOXA3O43365 443 aaPredicted RBP5.32□□□□□ -1.56
RGPD3-201ENST00000304514 S100A4P26447 101 aaKnown RBP5.32□□□□□ -1.56
RGPD3-201ENST00000304514 HOXD3P31249 432 aaPredicted RBP5.32□□□□□ -1.56
RGPD3-201ENST00000304514 FAM159AQ6UWV7 190 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 FOXI2Q6ZQN5 318 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 CMYA5Q8N3K9 4069 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 TRAV12-2A0A075B6T6 113 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 A0A1B0GWB2 263 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 K7ERJ3 54 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 KRTAP10-9P60411 292 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 Q8N1Y9 231 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 BEX4Q9NWD9 120 aaPredicted RBP5.32□□□□□ -1.56
RGPD3-201ENST00000304514 TRBV27A0A0K0K1C4 114 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 H3BUT2 72 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 M0QY20 66 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 DUSP14O95147 198 aaKnown RBP5.32□□□□□ -1.56
RGPD3-201ENST00000304514 C4orf3Q8WVX3 66 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 ACACAQ13085 2346 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 UBR5O95071 2799 aaPredicted RBP5.32□□□□□ -1.56
RGPD3-201ENST00000304514 E9PLD3 99 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 CD7P09564 240 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 SMIM13P0DJ93 91 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 NSUN5P1Q3KNT7 163 aa5.32□□□□□ -1.56
RGPD3-201ENST00000304514 A0A087WWL8 130 aa5.31□□□□□ -1.56
RGPD3-201ENST00000304514 SYNJ2BPP57105 145 aa5.31□□□□□ -1.56
RGPD3-201ENST00000304514 SNRPD3P62318 126 aaKnown RBP5.31□□□□□ -1.56
RGPD3-201ENST00000304514 OR5A1Q8NGJ0 315 aa5.31□□□□□ -1.56
RGPD3-201ENST00000304514 FAM104AQ969W3 186 aa5.31□□□□□ -1.56
RGPD3-201ENST00000304514 TMEM141Q96I45 108 aa5.31□□□□□ -1.56
RGPD3-201ENST00000304514 RBMY1BA6NDE4 496 aaKnown RBP5.31□□□□□ -1.56
RGPD3-201ENST00000304514 RBMY1EA6NEQ0 496 aaKnown RBP5.31□□□□□ -1.56
RGPD3-201ENST00000304514 RBMY1DP0C7P1 496 aaKnown RBP5.31□□□□□ -1.56
RGPD3-201ENST00000304514 PRSS29PA6NIE9 313 aa5.31□□□□□ -1.56
RGPD3-201ENST00000304514 LINC00467Q9BRT7 94 aa5.31□□□□□ -1.56
RGPD3-201ENST00000304514 TP53TG1Q9Y2A0 90 aa5.31□□□□□ -1.56
RGPD3-201ENST00000304514 CEP295Q9C0D2 2601 aa5.31□□□□□ -1.56
RGPD3-201ENST00000304514 IGHV1OR15-1A0A075B7D0 117 aa5.31□□□□□ -1.56
RGPD3-201ENST00000304514 GAGE12BA1L429 117 aa5.31□□□□□ -1.56
RGPD3-201ENST00000304514 OCIAD2Q56VL3 154 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms