RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 Q6ZQT7 251 aa10.89□□□□□ -0.67
UBXN1-202ENST00000301935 TMEM263Q8WUH6 116 aaKnown RBP10.89□□□□□ -0.67
UBXN1-202ENST00000301935 C16orf74Q96GX8 76 aa10.89□□□□□ -0.67
UBXN1-202ENST00000301935 IL36BQ9NZH7 164 aa10.89□□□□□ -0.67
UBXN1-202ENST00000301935 SMIM27A0A1W2PRY6 76 aa10.88□□□□□ -0.67
UBXN1-202ENST00000301935 TYMSP04818 313 aa10.88□□□□□ -0.67
UBXN1-202ENST00000301935 MIFP14174 115 aa10.88□□□□□ -0.67
UBXN1-202ENST00000301935 ZNF415Q09FC8 603 aa10.88□□□□□ -0.67
UBXN1-202ENST00000301935 WDR73Q6P4I2 378 aa10.88□□□□□ -0.67
UBXN1-202ENST00000301935 KCNIP4Q6PIL6 250 aa10.88□□□□□ -0.67
UBXN1-202ENST00000301935 BTF3L4Q96K17 158 aa10.88□□□□□ -0.67
UBXN1-202ENST00000301935 SPXQ9BT56 116 aa10.88□□□□□ -0.67
UBXN1-202ENST00000301935 NAT8BQ9UHF3 227 aa10.88□□□□□ -0.67
UBXN1-202ENST00000301935 TRAV9-1A0A075B6T8 112 aa10.87□□□□□ -0.67
UBXN1-202ENST00000301935 TMSB15BA0A087X1C1 80 aa10.87□□□□□ -0.67
UBXN1-202ENST00000301935 IGHV3-16A0A0C4DH30 117 aa10.87□□□□□ -0.67
UBXN1-202ENST00000301935 GNRH2O43555 120 aa10.87□□□□□ -0.67
UBXN1-202ENST00000301935 OR5AL1P0C617 328 aa10.87□□□□□ -0.67
UBXN1-202ENST00000301935 HTN1P15515 57 aa10.87□□□□□ -0.67
UBXN1-202ENST00000301935 FER1L6-AS1Q8NA97 138 aa10.87□□□□□ -0.67
UBXN1-202ENST00000301935 OR11H2Q8NH07 326 aa10.87□□□□□ -0.67
UBXN1-202ENST00000301935 SSBP4Q9BWG4 385 aaPredicted RBP10.87□□□□□ -0.67
UBXN1-202ENST00000301935 A0A0J9YWU9 116 aa10.86□□□□□ -0.67
UBXN1-202ENST00000301935 IGLC6P0CF74 106 aa10.86□□□□□ -0.67
UBXN1-202ENST00000301935 ZNF575Q86XF7 245 aa10.86□□□□□ -0.67
UBXN1-202ENST00000301935 PTH2Q96A98 100 aa10.86□□□□□ -0.67
UBXN1-202ENST00000301935 BORCS7Q96B45 105 aa10.86□□□□□ -0.67
UBXN1-202ENST00000301935 NDUFAF3Q9BU61 184 aa10.86□□□□□ -0.67
UBXN1-202ENST00000301935 SMCO4Q9NRQ5 59 aa10.86□□□□□ -0.67
UBXN1-202ENST00000301935 GRIFINA4D1Z8 144 aa10.85□□□□□ -0.67
UBXN1-202ENST00000301935 HIGD1CA8MV81 97 aa10.85□□□□□ -0.67
UBXN1-202ENST00000301935 SNURFLB1AK76 121 aa10.85□□□□□ -0.67
UBXN1-202ENST00000301935 SNAI2O43623 268 aa10.85□□□□□ -0.67
UBXN1-202ENST00000301935 ARMS2P0C7Q2 107 aa10.85□□□□□ -0.67
UBXN1-202ENST00000301935 CACNG7P62955 275 aa10.85□□□□□ -0.67
UBXN1-202ENST00000301935 PIK3CD-AS1Q5SR53 167 aa10.85□□□□□ -0.67
UBXN1-202ENST00000301935 RNASE8Q8TDE3 154 aaKnown RBP10.85□□□□□ -0.67
UBXN1-202ENST00000301935 SCRT2Q9NQ03 307 aa10.85□□□□□ -0.67
UBXN1-202ENST00000301935 X6R8D5 127 aa10.85□□□□□ -0.67
UBXN1-202ENST00000301935 DNAH10Q8IVF4 4471 aa10.85□□□□□ -0.67
UBXN1-202ENST00000301935 A0A1B0GW15 77 aa10.84□□□□□ -0.67
UBXN1-202ENST00000301935 GZMBP10144 247 aa10.84□□□□□ -0.67
UBXN1-202ENST00000301935 RNASE3P12724 160 aaKnown RBP10.84□□□□□ -0.67
UBXN1-202ENST00000301935 CTRLP40313 264 aa10.84□□□□□ -0.67
UBXN1-202ENST00000301935 TCL1AP56279 114 aa10.84□□□□□ -0.67
UBXN1-202ENST00000301935 DAZ2Q13117 558 aaKnown RBP10.84□□□□□ -0.67
UBXN1-202ENST00000301935 CEMP1Q6PRD7 247 aaPredicted RBP10.84□□□□□ -0.67
UBXN1-202ENST00000301935 ATRAIDQ6UW56 229 aa10.84□□□□□ -0.67
UBXN1-202ENST00000301935 C9orf85Q96MD7 179 aa10.84□□□□□ -0.67
UBXN1-202ENST00000301935 PHLDA3Q9Y5J5 127 aa10.84□□□□□ -0.67
UBXN1-202ENST00000301935 TIMM8BQ9Y5J9 83 aaPredicted RBP10.84□□□□□ -0.67
UBXN1-202ENST00000301935 AZU1P20160 251 aa10.83□□□□□ -0.68
UBXN1-202ENST00000301935 LYZL1Q6UWQ5 148 aa10.83□□□□□ -0.68
UBXN1-202ENST00000301935 C11orf72Q8NBR9 251 aa10.83□□□□□ -0.68
UBXN1-202ENST00000301935 SYT8Q8NBV8 401 aa10.83□□□□□ -0.68
UBXN1-202ENST00000301935 NUP35Q8NFH5 326 aa10.83□□□□□ -0.68
UBXN1-202ENST00000301935 GTSF1Q8WW33 167 aa10.83□□□□□ -0.68
UBXN1-202ENST00000301935 CNFNQ9BYD5 112 aa10.83□□□□□ -0.68
UBXN1-202ENST00000301935 GSN-AS1Q9NRJ2 163 aa10.83□□□□□ -0.68
UBXN1-202ENST00000301935 MDFICQ9P1T7 246 aa10.83□□□□□ -0.68
UBXN1-202ENST00000301935 IGHV4-4A0A075B6R2 117 aa10.82□□□□□ -0.68
UBXN1-202ENST00000301935 A0A1B0GUT8 65 aa10.82□□□□□ -0.68
UBXN1-202ENST00000301935 TEX48A0A1B0GUV7 120 aa10.82□□□□□ -0.68
UBXN1-202ENST00000301935 H3BVH4 76 aa10.82□□□□□ -0.68
UBXN1-202ENST00000301935 M0R2P5 195 aa10.82□□□□□ -0.68
UBXN1-202ENST00000301935 S100A8P05109 93 aa10.82□□□□□ -0.68
UBXN1-202ENST00000301935 RIGQ13278 110 aa10.82□□□□□ -0.68
UBXN1-202ENST00000301935 LGALS9BQ3B8N2 356 aa10.82□□□□□ -0.68
UBXN1-202ENST00000301935 ATP5L2Q7Z4Y8 100 aa10.82□□□□□ -0.68
UBXN1-202ENST00000301935 ZFP82Q8N141 532 aa10.82□□□□□ -0.68
UBXN1-202ENST00000301935 PGLYRP4Q96LB8 373 aa10.82□□□□□ -0.68
UBXN1-202ENST00000301935 TPPP3Q9BW30 176 aa10.82□□□□□ -0.68
UBXN1-202ENST00000301935 KLK5Q9Y337 293 aaPredicted RBP10.82□□□□□ -0.68
UBXN1-202ENST00000301935 LYRM9A8MSI8 78 aa10.81□□□□□ -0.68
UBXN1-202ENST00000301935 SPANXN1Q5VSR9 72 aa10.81□□□□□ -0.68
UBXN1-202ENST00000301935 FAM3BP58499 235 aaPredicted RBP10.8□□□□□ -0.68
UBXN1-202ENST00000301935 COX19Q49B96 90 aa10.8□□□□□ -0.68
UBXN1-202ENST00000301935 RASL11AQ6T310 242 aa10.8□□□□□ -0.68
UBXN1-202ENST00000301935 Q8NAQ8 132 aa10.8□□□□□ -0.68
UBXN1-202ENST00000301935 C11orf68Q9H3H3 251 aaKnown RBP10.8□□□□□ -0.68
UBXN1-202ENST00000301935 HECTD4Q9Y4D8 3996 aa10.79□□□□□ -0.68
UBXN1-202ENST00000301935 TRBV24-1A0A075B6N3 115 aa10.79□□□□□ -0.68
UBXN1-202ENST00000301935 IGHV4-28A0A0C4DH34 117 aa10.79□□□□□ -0.68
UBXN1-202ENST00000301935 SPINK4O60575 86 aa10.79□□□□□ -0.68
UBXN1-202ENST00000301935 NXPH4O95158 308 aa10.79□□□□□ -0.68
UBXN1-202ENST00000301935 PRM2P04554 102 aa10.79□□□□□ -0.68
UBXN1-202ENST00000301935 TRGC1P0CF51 173 aa10.79□□□□□ -0.68
UBXN1-202ENST00000301935 ZNF876PQ49A33 203 aa10.79□□□□□ -0.68
UBXN1-202ENST00000301935 LCE2DQ5TA82 110 aaPredicted RBP10.79□□□□□ -0.68
UBXN1-202ENST00000301935 SMIM15Q7Z3B0 74 aa10.79□□□□□ -0.68
UBXN1-202ENST00000301935 RASL10AQ92737 203 aa10.79□□□□□ -0.68
UBXN1-202ENST00000301935 URGCP-MRPS24S4R325 110 aa10.79□□□□□ -0.68
UBXN1-202ENST00000301935 PCLOQ9Y6V0 5065 aa10.78□□□□□ -0.68
UBXN1-202ENST00000301935 PLAC8L1A1L4L8 177 aa10.78□□□□□ -0.68
UBXN1-202ENST00000301935 CIDEAO60543 219 aa10.78□□□□□ -0.68
UBXN1-202ENST00000301935 NTF3P20783 257 aa10.78□□□□□ -0.68
UBXN1-202ENST00000301935 ELOBQ15370 118 aa10.78□□□□□ -0.68
UBXN1-202ENST00000301935 OR10AG1Q8NH19 301 aa10.78□□□□□ -0.68
UBXN1-202ENST00000301935 NOP10Q9NPE3 64 aaKnown RBP10.78□□□□□ -0.68
UBXN1-202ENST00000301935 VPS13DQ5THJ4 4388 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms