RNA–Protein interactions for RNA: ENST00000301475.1

ZNF558-201, Transcript of zinc finger protein 558, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF558, Length 3,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-201ENST00000301475 CRYGDP07320 174 aa8.29□□□□□ -1.08
ZNF558-201ENST00000301475 CFC1BP0CG36 223 aa8.29□□□□□ -1.08
ZNF558-201ENST00000301475 CFC1P0CG37 223 aa8.29□□□□□ -1.08
ZNF558-201ENST00000301475 C11orf86A6NJI1 115 aa8.28□□□□□ -1.08
ZNF558-201ENST00000301475 TSPEAR-AS2P59090 65 aa8.28□□□□□ -1.08
ZNF558-201ENST00000301475 ZFAND6Q6FIF0 208 aa8.28□□□□□ -1.08
ZNF558-201ENST00000301475 FAM57AQ8TBR7 257 aa8.28□□□□□ -1.08
ZNF558-201ENST00000301475 IGLV4-69A0A075B6H9 119 aa8.28□□□□□ -1.08
ZNF558-201ENST00000301475 CLPSL1A2RUU4 121 aa8.28□□□□□ -1.08
ZNF558-201ENST00000301475 M0R381 172 aa8.28□□□□□ -1.08
ZNF558-201ENST00000301475 PRR30Q53SZ7 412 aaPredicted RBP8.28□□□□□ -1.08
ZNF558-201ENST00000301475 LYRM7Q5U5X0 104 aa8.28□□□□□ -1.08
ZNF558-201ENST00000301475 MAP1AP78559 2803 aaPredicted RBP8.28□□□□□ -1.08
ZNF558-201ENST00000301475 B5MCH6 92 aa8.27□□□□□ -1.08
ZNF558-201ENST00000301475 DUSP14O95147 198 aaKnown RBP8.27□□□□□ -1.08
ZNF558-201ENST00000301475 IGHV3-30P01768 117 aa8.27□□□□□ -1.08
ZNF558-201ENST00000301475 IGF1P05019 195 aa8.27□□□□□ -1.08
ZNF558-201ENST00000301475 IGHV3-30-5P0DP03 117 aa8.27□□□□□ -1.08
ZNF558-201ENST00000301475 CRIP2P52943 208 aaPredicted RBP8.27□□□□□ -1.08
ZNF558-201ENST00000301475 ANKHD1Q8IWZ3 2542 aaKnown RBP8.27□□□□□ -1.09
ZNF558-201ENST00000301475 J3KRW8 73 aa8.27□□□□□ -1.09
ZNF558-201ENST00000301475 C10orf126Q8N4M7 172 aa8.27□□□□□ -1.09
ZNF558-201ENST00000301475 AJUBAQ96IF1 538 aa8.27□□□□□ -1.09
ZNF558-201ENST00000301475 TRBV20-1A0A075B6N2 111 aa8.27□□□□□ -1.09
ZNF558-201ENST00000301475 TSHBP01222 138 aa8.27□□□□□ -1.09
ZNF558-201ENST00000301475 GAGE5Q13069 117 aa8.27□□□□□ -1.09
ZNF558-201ENST00000301475 GAGE6Q13070 117 aa8.27□□□□□ -1.09
ZNF558-201ENST00000301475 TEX29Q8N6K0 151 aa8.27□□□□□ -1.09
ZNF558-201ENST00000301475 C14orf178Q8N769 122 aaPredicted RBP8.27□□□□□ -1.09
ZNF558-201ENST00000301475 DEFB104AQ8WTQ1 72 aa8.27□□□□□ -1.09
ZNF558-201ENST00000301475 ZFHX3Q15911 3703 aa8.26□□□□□ -1.09
ZNF558-201ENST00000301475 EIF4EBP3O60516 100 aaPredicted RBP8.26□□□□□ -1.09
ZNF558-201ENST00000301475 SRD5A1P18405 259 aa8.26□□□□□ -1.09
ZNF558-201ENST00000301475 C15orf32Q32M92 178 aa8.26□□□□□ -1.09
ZNF558-201ENST00000301475 IGFL3Q6UXB1 125 aa8.26□□□□□ -1.09
ZNF558-201ENST00000301475 VCX2Q9H322 139 aa8.26□□□□□ -1.09
ZNF558-201ENST00000301475 PRTN3P24158 256 aa8.25□□□□□ -1.09
ZNF558-201ENST00000301475 ANXA2RQ3ZCQ2 193 aa8.25□□□□□ -1.09
ZNF558-201ENST00000301475 C9orf47Q6ZRZ4 202 aa8.25□□□□□ -1.09
ZNF558-201ENST00000301475 IGHV7-81A0A0B4J1V7 117 aa8.25□□□□□ -1.09
ZNF558-201ENST00000301475 SLC25A20O43772 301 aa8.25□□□□□ -1.09
ZNF558-201ENST00000301475 CRLF1O75462 422 aa8.25□□□□□ -1.09
ZNF558-201ENST00000301475 SCGB2A1O75556 95 aa8.25□□□□□ -1.09
ZNF558-201ENST00000301475 CLEC3BP05452 202 aa8.25□□□□□ -1.09
ZNF558-201ENST00000301475 MGPP08493 103 aa8.25□□□□□ -1.09
ZNF558-201ENST00000301475 TRPT1Q86TN4 253 aaKnown RBP8.25□□□□□ -1.09
ZNF558-201ENST00000301475 LY6G5BQ8NDX9 201 aa8.25□□□□□ -1.09
ZNF558-201ENST00000301475 MUC4Q99102 2169 aa8.25□□□□□ -1.09
ZNF558-201ENST00000301475 ODF3BA8MYP8 253 aa8.24□□□□□ -1.09
ZNF558-201ENST00000301475 AMELXQ99217 191 aa8.24□□□□□ -1.09
ZNF558-201ENST00000301475 DPH3P1Q9H4G8 78 aa8.24□□□□□ -1.09
ZNF558-201ENST00000301475 HIF1ANQ9NWT6 349 aa8.24□□□□□ -1.09
ZNF558-201ENST00000301475 TRAV4A0A0B4J268 109 aa8.24□□□□□ -1.09
ZNF558-201ENST00000301475 C9JAW5 83 aa8.24□□□□□ -1.09
ZNF558-201ENST00000301475 SCGB1C2P0DMR2 95 aa8.24□□□□□ -1.09
ZNF558-201ENST00000301475 Q8N6K4 173 aa8.24□□□□□ -1.09
ZNF558-201ENST00000301475 SLC25A29Q8N8R3 303 aa8.24□□□□□ -1.09
ZNF558-201ENST00000301475 HRNRQ86YZ3 2850 aaPredicted RBP8.24□□□□□ -1.09
ZNF558-201ENST00000301475 CENPVL3A0A0U1RRI6 287 aa8.24□□□□□ -1.09
ZNF558-201ENST00000301475 TMEM262E9PQX1 116 aa8.24□□□□□ -1.09
ZNF558-201ENST00000301475 RHODO00212 210 aa8.24□□□□□ -1.09
ZNF558-201ENST00000301475 LY6HO94772 140 aa8.24□□□□□ -1.09
ZNF558-201ENST00000301475 CCDC140Q96MF4 163 aa8.24□□□□□ -1.09
ZNF558-201ENST00000301475 PRO1854Q9UHT4 67 aa8.24□□□□□ -1.09
ZNF558-201ENST00000301475 GPHB5Q86YW7 130 aa8.23□□□□□ -1.09
ZNF558-201ENST00000301475 RAX2Q96IS3 184 aa8.23□□□□□ -1.09
ZNF558-201ENST00000301475 TP53TG1Q9Y2A0 90 aa8.23□□□□□ -1.09
ZNF558-201ENST00000301475 ECSCRQ19T08 205 aa8.23□□□□□ -1.09
ZNF558-201ENST00000301475 Q8NA96 180 aa8.23□□□□□ -1.09
ZNF558-201ENST00000301475 CCDC179H3BU77 68 aa8.22□□□□□ -1.09
ZNF558-201ENST00000301475 ELANEP08246 267 aa8.22□□□□□ -1.09
ZNF558-201ENST00000301475 NDUFV3P56181 108 aaKnown RBP8.22□□□□□ -1.09
ZNF558-201ENST00000301475 DEFB1P60022 68 aa8.22□□□□□ -1.09
ZNF558-201ENST00000301475 HERVK_113P61574 105 aa8.22□□□□□ -1.09
ZNF558-201ENST00000301475 RPL39P62891 51 aaKnown RBP8.22□□□□□ -1.09
ZNF558-201ENST00000301475 CLEC19AQ6UXS0 136 aa8.22□□□□□ -1.09
ZNF558-201ENST00000301475 MRPL53Q96EL3 112 aaKnown RBP8.22□□□□□ -1.09
ZNF558-201ENST00000301475 C20orf173Q96LM9 149 aa8.22□□□□□ -1.09
ZNF558-201ENST00000301475 EPG5Q9HCE0 2579 aa8.22□□□□□ -1.09
ZNF558-201ENST00000301475 K7ENP7 123 aa8.22□□□□□ -1.09
ZNF558-201ENST00000301475 ZFAND2AQ8N6M9 145 aa8.22□□□□□ -1.09
ZNF558-201ENST00000301475 ZNRF2Q8NHG8 242 aa8.22□□□□□ -1.09
ZNF558-201ENST00000301475 CFAP46Q8IYW2 2715 aa8.22□□□□□ -1.09
ZNF558-201ENST00000301475 A4D1N5 150 aa8.21□□□□□ -1.09
ZNF558-201ENST00000301475 IGIPA6NJ69 53 aa8.21□□□□□ -1.09
ZNF558-201ENST00000301475 B9A039 149 aa8.21□□□□□ -1.09
ZNF558-201ENST00000301475 HIVEP3Q5T1R4 2406 aa8.21□□□□□ -1.09
ZNF558-201ENST00000301475 S100A4P26447 101 aaKnown RBP8.21□□□□□ -1.1
ZNF558-201ENST00000301475 TMEM170BQ5T4T1 132 aa8.21□□□□□ -1.1
ZNF558-201ENST00000301475 NTN5Q8WTR8 489 aaPredicted RBP8.21□□□□□ -1.1
ZNF558-201ENST00000301475 PHLDA3Q9Y5J5 127 aa8.21□□□□□ -1.1
ZNF558-201ENST00000301475 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.21□□□□□ -1.1
ZNF558-201ENST00000301475 H7C2G1 150 aa8.21□□□□□ -1.1
ZNF558-201ENST00000301475 IGHV3-33P01772 117 aa8.21□□□□□ -1.1
ZNF558-201ENST00000301475 GAGE2BQ13066 116 aa8.21□□□□□ -1.1
ZNF558-201ENST00000301475 PMVKQ15126 192 aa8.21□□□□□ -1.1
ZNF558-201ENST00000301475 GAGE2EQ4V326 116 aa8.21□□□□□ -1.1
ZNF558-201ENST00000301475 TIMD4Q96H15 378 aa8.21□□□□□ -1.1
ZNF558-201ENST00000301475 GAGE2DQ9UEU5 116 aa8.21□□□□□ -1.1
ZNF558-201ENST00000301475 MYO18BQ8IUG5 2567 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms