RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 DPH3P1Q9H4G8 78 aa9.91□□□□□ -0.82
TVP23A-201ENST00000299866 ATMQ13315 3056 aa9.91□□□□□ -0.82
TVP23A-201ENST00000299866 SNCGO76070 127 aa9.91□□□□□ -0.82
TVP23A-201ENST00000299866 IGHV3-30P01768 117 aa9.91□□□□□ -0.82
TVP23A-201ENST00000299866 NHLRC4P0CG21 123 aaPredicted RBP9.91□□□□□ -0.82
TVP23A-201ENST00000299866 IGHV3-30-5P0DP03 117 aa9.91□□□□□ -0.82
TVP23A-201ENST00000299866 TRAV4A0A0B4J268 109 aa9.9□□□□□ -0.82
TVP23A-201ENST00000299866 CRLF1O75462 422 aa9.9□□□□□ -0.82
TVP23A-201ENST00000299866 TP53TG1Q9Y2A0 90 aa9.9□□□□□ -0.82
TVP23A-201ENST00000299866 ACACAQ13085 2346 aa9.9□□□□□ -0.82
TVP23A-201ENST00000299866 SBSPONQ8IVN8 264 aa9.9□□□□□ -0.82
TVP23A-201ENST00000299866 IGHV7-81A0A0B4J1V7 117 aa9.89□□□□□ -0.83
TVP23A-201ENST00000299866 CLPSL1A2RUU4 121 aa9.89□□□□□ -0.83
TVP23A-201ENST00000299866 RPL39P62891 51 aaKnown RBP9.89□□□□□ -0.83
TVP23A-201ENST00000299866 BEX4Q9NWD9 120 aaPredicted RBP9.89□□□□□ -0.83
TVP23A-201ENST00000299866 IGLV4-69A0A075B6H9 119 aa9.89□□□□□ -0.83
TVP23A-201ENST00000299866 NTN5Q8WTR8 489 aaPredicted RBP9.89□□□□□ -0.83
TVP23A-201ENST00000299866 CITED1Q99966 193 aa9.89□□□□□ -0.83
TVP23A-201ENST00000299866 CCDC179H3BU77 68 aa9.89□□□□□ -0.83
TVP23A-201ENST00000299866 TSHBP01222 138 aa9.89□□□□□ -0.83
TVP23A-201ENST00000299866 TTC32Q5I0X7 151 aa9.89□□□□□ -0.83
TVP23A-201ENST00000299866 TIMD4Q96H15 378 aa9.89□□□□□ -0.83
TVP23A-201ENST00000299866 A4D1N5 150 aa9.88□□□□□ -0.83
TVP23A-201ENST00000299866 B9A039 149 aa9.88□□□□□ -0.83
TVP23A-201ENST00000299866 RNF223E7ERA6 249 aa9.88□□□□□ -0.83
TVP23A-201ENST00000299866 Q1RN00 199 aa9.88□□□□□ -0.83
TVP23A-201ENST00000299866 C1orf122Q6ZSJ8 110 aa9.88□□□□□ -0.83
TVP23A-201ENST00000299866 IGHV3-64A0A075B6Q5 118 aa9.88□□□□□ -0.83
TVP23A-201ENST00000299866 GNRH2O43555 120 aa9.88□□□□□ -0.83
TVP23A-201ENST00000299866 IGHV4-39P01824 125 aa9.88□□□□□ -0.83
TVP23A-201ENST00000299866 ASIPP42127 132 aa9.88□□□□□ -0.83
TVP23A-201ENST00000299866 C9orf47Q6ZRZ4 202 aa9.88□□□□□ -0.83
TVP23A-201ENST00000299866 METTL26Q96S19 204 aa9.88□□□□□ -0.83
TVP23A-201ENST00000299866 TRAV2A0A0B4J234 112 aa9.88□□□□□ -0.83
TVP23A-201ENST00000299866 NDUFV3P56181 108 aaKnown RBP9.88□□□□□ -0.83
TVP23A-201ENST00000299866 SLC25A29Q8N8R3 303 aa9.88□□□□□ -0.83
TVP23A-201ENST00000299866 LRBAP50851 2863 aa9.87□□□□□ -0.83
TVP23A-201ENST00000299866 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.87□□□□□ -0.83
TVP23A-201ENST00000299866 G3V318 75 aa9.87□□□□□ -0.83
TVP23A-201ENST00000299866 RHODO00212 210 aa9.87□□□□□ -0.83
TVP23A-201ENST00000299866 LGALS3P17931 250 aaKnown RBP9.87□□□□□ -0.83
TVP23A-201ENST00000299866 SPTBN1Q01082 2364 aaKnown RBP9.87□□□□□ -0.83
TVP23A-201ENST00000299866 CD3EP07766 207 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 RNASE4P34096 147 aaKnown RBP9.86□□□□□ -0.83
TVP23A-201ENST00000299866 PMVKQ15126 192 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 C20orf173Q96LM9 149 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 IGKV3-7A0A075B6H7 116 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 IGFL3Q6UXB1 125 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 VMO1Q7Z5L0 202 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 LY6G5BQ8NDX9 201 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 GAGE12JA6NER3 117 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 J3QQQ9 107 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 GAGE7O76087 117 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 GAGE12FP0CL80 117 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 GAGE12GP0CL81 117 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 GAGE12IP0CL82 117 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 GAGE4Q13068 117 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 Q8N1Y9 231 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 LINC01560Q8TB33 94 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 CCDC140Q96MF4 163 aa9.86□□□□□ -0.83
TVP23A-201ENST00000299866 SRD5A1P18405 259 aa9.85□□□□□ -0.83
TVP23A-201ENST00000299866 GPHB5Q86YW7 130 aa9.85□□□□□ -0.83
TVP23A-201ENST00000299866 ZNRF2Q8NHG8 242 aa9.85□□□□□ -0.83
TVP23A-201ENST00000299866 JPT2Q9H910 190 aa9.85□□□□□ -0.83
TVP23A-201ENST00000299866 F5H697 171 aa9.85□□□□□ -0.83
TVP23A-201ENST00000299866 ATP6V0E1O15342 81 aa9.85□□□□□ -0.83
TVP23A-201ENST00000299866 ELANEP08246 267 aa9.85□□□□□ -0.83
TVP23A-201ENST00000299866 TCF15Q12870 199 aa9.85□□□□□ -0.83
TVP23A-201ENST00000299866 SMIM20Q8N5G0 67 aa9.85□□□□□ -0.83
TVP23A-201ENST00000299866 TRAV21A0A0B4J279 112 aa9.84□□□□□ -0.83
TVP23A-201ENST00000299866 EIF4EBP3O60516 100 aaPredicted RBP9.84□□□□□ -0.83
TVP23A-201ENST00000299866 IGHV3-33P01772 117 aa9.84□□□□□ -0.83
TVP23A-201ENST00000299866 IFITM1P13164 125 aa9.84□□□□□ -0.83
TVP23A-201ENST00000299866 PAPPA-AS1Q5QFB9 102 aa9.84□□□□□ -0.83
TVP23A-201ENST00000299866 TEX49A0A1B0GTD5 131 aa9.84□□□□□ -0.83
TVP23A-201ENST00000299866 Q8N9W7 124 aa9.84□□□□□ -0.83
TVP23A-201ENST00000299866 OPRPNQ99935 248 aaPredicted RBP9.84□□□□□ -0.83
TVP23A-201ENST00000299866 IGIPA6NJ69 53 aa9.84□□□□□ -0.83
TVP23A-201ENST00000299866 ODF3BA8MYP8 253 aa9.84□□□□□ -0.83
TVP23A-201ENST00000299866 F6UB75 175 aa9.84□□□□□ -0.83
TVP23A-201ENST00000299866 ZFAND2AQ8N6M9 145 aa9.84□□□□□ -0.83
TVP23A-201ENST00000299866 SVEP1Q4LDE5 3571 aa9.84□□□□□ -0.83
TVP23A-201ENST00000299866 DCHS2Q6V1P9 2916 aa9.83□□□□□ -0.84
TVP23A-201ENST00000299866 A0A087WWL8 130 aa9.83□□□□□ -0.84
TVP23A-201ENST00000299866 RPL11P62913 178 aaKnown RBP9.83□□□□□ -0.84
TVP23A-201ENST00000299866 MUSTN1Q8IVN3 82 aa9.83□□□□□ -0.84
TVP23A-201ENST00000299866 FAM110DQ8TAY7 271 aaPredicted RBP9.83□□□□□ -0.84
TVP23A-201ENST00000299866 HERV-K104P63124 156 aa9.83□□□□□ -0.84
TVP23A-201ENST00000299866 C15orf53Q8NAA6 179 aa9.83□□□□□ -0.84
TVP23A-201ENST00000299866 OR10J6PQ8NGY7 276 aa9.83□□□□□ -0.84
TVP23A-201ENST00000299866 TRAV8-4A0A0B4J246 113 aa9.83□□□□□ -0.84
TVP23A-201ENST00000299866 TRBV7-9A0A0J9YWB2 115 aa9.83□□□□□ -0.84
TVP23A-201ENST00000299866 SHISA2Q6UWI4 295 aa9.83□□□□□ -0.84
TVP23A-201ENST00000299866 Q8N6K4 173 aa9.83□□□□□ -0.84
TVP23A-201ENST00000299866 MRPL53Q96EL3 112 aaKnown RBP9.83□□□□□ -0.84
TVP23A-201ENST00000299866 FAM159AQ6UWV7 190 aa9.82□□□□□ -0.84
TVP23A-201ENST00000299866 ZNF256Q9Y2P7 627 aaPredicted RBP9.82□□□□□ -0.84
TVP23A-201ENST00000299866 LINC00527Q9UJ94 153 aa9.82□□□□□ -0.84
TVP23A-201ENST00000299866 CENPVL3A0A0U1RRI6 287 aa9.81□□□□□ -0.84
TVP23A-201ENST00000299866 LINC01620Q4KN68 170 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms