RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 IFI27L1Q96BM0 104 aa7.78□□□□□ -1.16
FOXN4-201ENST00000299162 ANAPC13Q9BS18 74 aa7.78□□□□□ -1.16
FOXN4-201ENST00000299162 HELZ2Q9BYK8 2649 aaKnown RBP7.78□□□□□ -1.16
FOXN4-201ENST00000299162 A0A1B0GWB2 263 aa7.77□□□□□ -1.16
FOXN4-201ENST00000299162 OOSP1A8MZH6 123 aa7.77□□□□□ -1.16
FOXN4-201ENST00000299162 C10orf99Q6UWK7 81 aa7.77□□□□□ -1.16
FOXN4-201ENST00000299162 EEF1AKMT3Q96AZ1 226 aa7.77□□□□□ -1.16
FOXN4-201ENST00000299162 IGKV2D-26A0A0A0MRZ7 120 aa7.77□□□□□ -1.17
FOXN4-201ENST00000299162 METTL26Q96S19 204 aa7.77□□□□□ -1.17
FOXN4-201ENST00000299162 J3QR89 54 aa7.77□□□□□ -1.17
FOXN4-201ENST00000299162 OVOL3O00110 214 aa7.77□□□□□ -1.17
FOXN4-201ENST00000299162 EBI3Q14213 229 aa7.77□□□□□ -1.17
FOXN4-201ENST00000299162 C16orf92Q96LL3 132 aa7.77□□□□□ -1.17
FOXN4-201ENST00000299162 BBC3Q96PG8 261 aaPredicted RBP7.77□□□□□ -1.17
FOXN4-201ENST00000299162 PRR25Q96S07 402 aa7.77□□□□□ -1.17
FOXN4-201ENST00000299162 MOB4Q9Y3A3 225 aa7.77□□□□□ -1.17
FOXN4-201ENST00000299162 C2CD3Q4AC94 2353 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 EDN2P20800 178 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 C10orf105Q8TEF2 133 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 FOXC2Q99958 501 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 F6UB75 175 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 IGF1P05019 195 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 FGF6P10767 208 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 FHL3Q13643 280 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 CDIP1Q9H305 208 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 ZNF492Q9P255 531 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 LOC107984156A0A0G2JMH3 177 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 BUB3O43684 328 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 XGP55808 180 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 PAX8Q06710 450 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 ARL17AQ8IVW1 177 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 HIST1H4GQ99525 98 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 CHAC1Q9BUX1 264 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 VPREB3Q9UKI3 123 aa7.76□□□□□ -1.17
FOXN4-201ENST00000299162 IGKV3-20P01619 116 aa7.75□□□□□ -1.17
FOXN4-201ENST00000299162 MSMBP08118 114 aa7.75□□□□□ -1.17
FOXN4-201ENST00000299162 GATA1P15976 413 aaPredicted RBP7.75□□□□□ -1.17
FOXN4-201ENST00000299162 PIFOQ8TCI5 191 aa7.75□□□□□ -1.17
FOXN4-201ENST00000299162 SPXQ9BT56 116 aa7.75□□□□□ -1.17
FOXN4-201ENST00000299162 NHLRC4P0CG21 123 aaPredicted RBP7.75□□□□□ -1.17
FOXN4-201ENST00000299162 TM2D2Q9BX73 214 aa7.75□□□□□ -1.17
FOXN4-201ENST00000299162 NPIPB6E9PJ23 425 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 CCDC179H3BU77 68 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 H3BVH4 76 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 GAS8-AS1O95177 125 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 NPYP01303 97 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 IGHV4-59P01825 116 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 IGHG4P01861 327 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 HBDP02042 147 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 LEPP41159 167 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 ZC2HC1BQ5TFG8 222 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 ZFAND3Q9H8U3 227 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 CLPSL1A2RUU4 121 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 RNF223E7ERA6 249 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 HIST2H2BCQ6DN03 193 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 FLNAP21333 2647 aaKnown RBP7.74□□□□□ -1.17
FOXN4-201ENST00000299162 ORMDL3Q8N138 153 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 LYPD1Q8N2G4 141 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 SYT8Q8NBV8 401 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 OR4X2Q8NGF9 303 aa7.74□□□□□ -1.17
FOXN4-201ENST00000299162 KRTAP10-9P60411 292 aa7.73□□□□□ -1.17
FOXN4-201ENST00000299162 PDE6HQ13956 83 aa7.73□□□□□ -1.17
FOXN4-201ENST00000299162 TMEM78Q5T7P6 136 aa7.73□□□□□ -1.17
FOXN4-201ENST00000299162 AGPAT4-IT1Q9H0P7 198 aa7.73□□□□□ -1.17
FOXN4-201ENST00000299162 NBPF19A0A087WUL8 3843 aa7.73□□□□□ -1.17
FOXN4-201ENST00000299162 A0A096LNJ9 63 aa7.73□□□□□ -1.17
FOXN4-201ENST00000299162 OR9G4Q8NGQ1 327 aa7.73□□□□□ -1.17
FOXN4-201ENST00000299162 PTH2Q96A98 100 aa7.73□□□□□ -1.17
FOXN4-201ENST00000299162 TRAV26-2A0A0B4J265 109 aa7.72□□□□□ -1.17
FOXN4-201ENST00000299162 MRPL51Q4U2R6 128 aaKnown RBP7.72□□□□□ -1.17
FOXN4-201ENST00000299162 CT83Q5H943 113 aa7.72□□□□□ -1.17
FOXN4-201ENST00000299162 C3orf56Q8N813 242 aa7.72□□□□□ -1.17
FOXN4-201ENST00000299162 HAX1O00165 279 aa7.72□□□□□ -1.17
FOXN4-201ENST00000299162 APOMO95445 188 aa7.72□□□□□ -1.17
FOXN4-201ENST00000299162 DEFB112Q30KQ8 113 aa7.72□□□□□ -1.17
FOXN4-201ENST00000299162 GAGE13Q4V321 117 aa7.72□□□□□ -1.17
FOXN4-201ENST00000299162 OXLD1Q5BKU9 147 aa7.72□□□□□ -1.17
FOXN4-201ENST00000299162 A0A087WX48 190 aa7.71□□□□□ -1.17
FOXN4-201ENST00000299162 KHDC1LQ5JSQ8 128 aa7.71□□□□□ -1.17
FOXN4-201ENST00000299162 Q6ZUT4 128 aa7.71□□□□□ -1.17
FOXN4-201ENST00000299162 GFRA4Q9GZZ7 299 aa7.71□□□□□ -1.17
FOXN4-201ENST00000299162 CYSLTR1Q9Y271 337 aa7.71□□□□□ -1.17
FOXN4-201ENST00000299162 TRBV25-1A0A075B6N4 114 aa7.71□□□□□ -1.18
FOXN4-201ENST00000299162 ZNF469Q96JG9 3925 aaPredicted RBP7.71□□□□□ -1.18
FOXN4-201ENST00000299162 TRBV20-1A0A075B6N2 111 aa7.71□□□□□ -1.18
FOXN4-201ENST00000299162 TRBV7-1A0A0A6YYK4 115 aa7.71□□□□□ -1.18
FOXN4-201ENST00000299162 TMEM8BA6NDV4 472 aa7.71□□□□□ -1.18
FOXN4-201ENST00000299162 PRSS29PA6NIE9 313 aa7.71□□□□□ -1.18
FOXN4-201ENST00000299162 FABP5P3A8MUU1 101 aa7.71□□□□□ -1.18
FOXN4-201ENST00000299162 M0R381 172 aa7.71□□□□□ -1.18
FOXN4-201ENST00000299162 APCP25054 2843 aa7.71□□□□□ -1.18
FOXN4-201ENST00000299162 BEX4Q9NWD9 120 aaPredicted RBP7.71□□□□□ -1.18
FOXN4-201ENST00000299162 C11orf21Q9P2W6 132 aa7.71□□□□□ -1.18
FOXN4-201ENST00000299162 ITPR3Q14573 2671 aa7.7□□□□□ -1.18
FOXN4-201ENST00000299162 COX6B1P14854 86 aa7.7□□□□□ -1.18
FOXN4-201ENST00000299162 PSMB2P49721 201 aa7.7□□□□□ -1.18
FOXN4-201ENST00000299162 C20orf173Q96LM9 149 aa7.7□□□□□ -1.18
FOXN4-201ENST00000299162 TRAV8-2A0A0B4J237 113 aa7.7□□□□□ -1.18
FOXN4-201ENST00000299162 B4DSR2 109 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms