RNA–Protein interactions for RNA: ENST00000295911.6

CLRN1-201, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-201ENST00000295911 Q6ZN92 141 aa6.92□□□□□ -1.3
CLRN1-201ENST00000295911 FOXI2Q6ZQN5 318 aa6.92□□□□□ -1.3
CLRN1-201ENST00000295911 OR1N2Q8NGR9 330 aa6.92□□□□□ -1.3
CLRN1-201ENST00000295911 IFI27L1Q96BM0 104 aa6.92□□□□□ -1.3
CLRN1-201ENST00000295911 DOPEY2Q9Y3R5 2298 aa6.91□□□□□ -1.3
CLRN1-201ENST00000295911 MAP1AP78559 2803 aaPredicted RBP6.91□□□□□ -1.3
CLRN1-201ENST00000295911 PTPN13Q12923 2485 aa6.91□□□□□ -1.3
CLRN1-201ENST00000295911 KRTAP4-8A0A0G2JLE6 195 aa6.91□□□□□ -1.3
CLRN1-201ENST00000295911 K7EMI3 77 aa6.91□□□□□ -1.3
CLRN1-201ENST00000295911 M0R381 172 aa6.91□□□□□ -1.3
CLRN1-201ENST00000295911 GNRH2O43555 120 aa6.91□□□□□ -1.3
CLRN1-201ENST00000295911 NXPH4O95158 308 aa6.91□□□□□ -1.3
CLRN1-201ENST00000295911 RNASE3P12724 160 aaKnown RBP6.91□□□□□ -1.3
CLRN1-201ENST00000295911 NRACQ8N912 160 aa6.91□□□□□ -1.3
CLRN1-201ENST00000295911 AP1S3Q96PC3 154 aa6.91□□□□□ -1.3
CLRN1-201ENST00000295911 DUX5Q96PT3 197 aa6.91□□□□□ -1.3
CLRN1-201ENST00000295911 C20orf78Q9BR46 151 aa6.91□□□□□ -1.3
CLRN1-201ENST00000295911 MRPS16Q9Y3D3 137 aaKnown RBP6.91□□□□□ -1.3
CLRN1-201ENST00000295911 IGLV2-18A0A075B6J9 118 aa6.9□□□□□ -1.31
CLRN1-201ENST00000295911 DNAJC9-AS1A6NH13 148 aa6.9□□□□□ -1.31
CLRN1-201ENST00000295911 SMIM17P0DL12 118 aa6.9□□□□□ -1.31
CLRN1-201ENST00000295911 CDKN1BP46527 198 aa6.9□□□□□ -1.31
CLRN1-201ENST00000295911 SLURP1P55000 103 aa6.9□□□□□ -1.31
CLRN1-201ENST00000295911 LAGE3Q14657 143 aa6.9□□□□□ -1.31
CLRN1-201ENST00000295911 MAJINQ3KP22 176 aa6.9□□□□□ -1.31
CLRN1-201ENST00000295911 Q6ZSV7 163 aa6.9□□□□□ -1.31
CLRN1-201ENST00000295911 OR11H1Q8NG94 326 aa6.9□□□□□ -1.31
CLRN1-201ENST00000295911 OR9G4Q8NGQ1 327 aa6.9□□□□□ -1.31
CLRN1-201ENST00000295911 PMCHL2Q9BQD1 86 aa6.9□□□□□ -1.31
CLRN1-201ENST00000295911 GOLT1BQ9Y3E0 138 aa6.9□□□□□ -1.31
CLRN1-201ENST00000295911 SELENOKQ9Y6D0 94 aa6.9□□□□□ -1.31
CLRN1-201ENST00000295911 MUC4Q99102 2169 aa6.9□□□□□ -1.31
CLRN1-201ENST00000295911 NAV2Q8IVL1 2488 aa6.9□□□□□ -1.31
CLRN1-201ENST00000295911 TEX15Q9BXT5 2789 aa6.89□□□□□ -1.31
CLRN1-201ENST00000295911 POLQO75417 2590 aa6.89□□□□□ -1.31
CLRN1-201ENST00000295911 VPS13CQ709C8 3753 aa6.89□□□□□ -1.31
CLRN1-201ENST00000295911 TRAV12-3A0A0B4J271 114 aa6.89□□□□□ -1.31
CLRN1-201ENST00000295911 H0Y8G0 127 aa6.89□□□□□ -1.31
CLRN1-201ENST00000295911 ATP5LO75964 103 aa6.89□□□□□ -1.31
CLRN1-201ENST00000295911 GAS8-AS1O95177 125 aa6.89□□□□□ -1.31
CLRN1-201ENST00000295911 GATA1P15976 413 aaPredicted RBP6.89□□□□□ -1.31
CLRN1-201ENST00000295911 POM121L12Q8N7R1 296 aa6.89□□□□□ -1.31
CLRN1-201ENST00000295911 SYT8Q8NBV8 401 aa6.89□□□□□ -1.31
CLRN1-201ENST00000295911 KLHL30-AS1Q8NEE0 82 aa6.89□□□□□ -1.31
CLRN1-201ENST00000295911 YAE1D1Q9NRH1 226 aa6.89□□□□□ -1.31
CLRN1-201ENST00000295911 APCP25054 2843 aa6.89□□□□□ -1.31
CLRN1-201ENST00000295911 EPG5Q9HCE0 2579 aa6.88□□□□□ -1.31
CLRN1-201ENST00000295911 A0A1B0GV90 55 aa6.88□□□□□ -1.31
CLRN1-201ENST00000295911 hDV102S1A0JD36 115 aa6.88□□□□□ -1.31
CLRN1-201ENST00000295911 CD7P09564 240 aa6.88□□□□□ -1.31
CLRN1-201ENST00000295911 G0S2P27469 103 aa6.88□□□□□ -1.31
CLRN1-201ENST00000295911 KIR3DS1Q14943 382 aa6.88□□□□□ -1.31
CLRN1-201ENST00000295911 ORMDL2Q53FV1 153 aa6.88□□□□□ -1.31
CLRN1-201ENST00000295911 KHDC1LQ5JSQ8 128 aa6.88□□□□□ -1.31
CLRN1-201ENST00000295911 SLC25A34Q6PIV7 304 aa6.88□□□□□ -1.31
CLRN1-201ENST00000295911 ADAMTSL5Q6ZMM2 481 aa6.88□□□□□ -1.31
CLRN1-201ENST00000295911 C14orf178Q8N769 122 aaPredicted RBP6.88□□□□□ -1.31
CLRN1-201ENST00000295911 DYNLRB2Q8TF09 96 aa6.88□□□□□ -1.31
CLRN1-201ENST00000295911 CREBBPQ92793 2442 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 AGRNO00468 2067 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 IGHV1OR15-1A0A075B7D0 117 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 TRAV26-2A0A0B4J265 109 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 A8MTW9 85 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 SUMO2P61956 95 aaKnown RBP6.87□□□□□ -1.31
CLRN1-201ENST00000295911 NUTF2P61970 127 aaKnown RBP6.87□□□□□ -1.31
CLRN1-201ENST00000295911 DEFB136Q30KP8 78 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 COL5A1-AS1Q5SY13 56 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 HIST2H2BCQ6DN03 193 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 C18orf65Q6ZTR6 163 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 TMEM158Q8WZ71 300 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 C9orf85Q96MD7 179 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 SMIM2Q9BVW6 85 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 C16orf95Q9H693 158 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 TMEM160Q9NX00 188 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 CENPEQ02224 2701 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 ABCA12Q86UK0 2595 aa6.87□□□□□ -1.31
CLRN1-201ENST00000295911 TRGV11A0A075B6L2 103 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 TRAV25A0A0B4J276 109 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 IGHV3-16A0A0C4DH30 117 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 LINC01549A6NIU2 74 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 IGKV3-20P01619 116 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 RNASE1P07998 156 aaKnown RBP6.86□□□□□ -1.31
CLRN1-201ENST00000295911 MGPP08493 103 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 HLA-DRB4P13762 266 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 FXYD7P58549 80 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 RPL32P62910 135 aaKnown RBP6.86□□□□□ -1.31
CLRN1-201ENST00000295911 KRTAP1-1Q07627 177 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 SPINK13Q1W4C9 94 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 AMTNQ6UX39 209 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 RASL10AQ92737 203 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 DLX4Q92988 240 aaPredicted RBP6.86□□□□□ -1.31
CLRN1-201ENST00000295911 MCRIP2Q9BUT9 160 aaKnown RBP6.86□□□□□ -1.31
CLRN1-201ENST00000295911 KIF25-AS1Q9Y6Z4 181 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 HLA-DRB4X5D2U9 266 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 ZANQ9Y493 2812 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 ZFHX3Q15911 3703 aa6.86□□□□□ -1.31
CLRN1-201ENST00000295911 NUDT3O95989 172 aa6.85□□□□□ -1.31
CLRN1-201ENST00000295911 PRSS1P07477 247 aa6.85□□□□□ -1.31
CLRN1-201ENST00000295911 COX8AP10176 69 aa6.85□□□□□ -1.31
CLRN1-201ENST00000295911 DEFB131AP59861 70 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms