RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 K7ERJ3 54 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 A0A1W2PPR1 153 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 LTAP01374 205 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 GAGE5Q13069 117 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 GAGE6Q13070 117 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 C17orf58Q2M2W7 97 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 USP9YO00507 2555 aaPredicted RBP9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 IGHV3-53P01767 116 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 IGLC1P0CG04 106 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 KRTAP27-1Q3LI81 207 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 ZNRD1Q9P1U0 126 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 DKK2Q9UBU2 259 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 HCFC1P51610 2035 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 INS-IGF2F8WCM5 200 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 F8WEM9 126 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 COL8A2P25067 703 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 LOXL1Q08397 574 aaPredicted RBP9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 WDR86Q86TI4 376 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 CARD19Q96LW7 228 aa9.34□□□□□ -0.91
SYNGAP1-201ENST00000293748 Q6ZR03 302 aa9.33□□□□□ -0.92
SYNGAP1-201ENST00000293748 NAV2Q8IVL1 2488 aa9.33□□□□□ -0.92
SYNGAP1-201ENST00000293748 BAHCC1Q9P281 2608 aa9.33□□□□□ -0.92
SYNGAP1-201ENST00000293748 LY6HO94772 140 aa9.33□□□□□ -0.92
SYNGAP1-201ENST00000293748 TRACP01848 142 aa9.33□□□□□ -0.92
SYNGAP1-201ENST00000293748 SRSF2Q01130 221 aaKnown RBP9.33□□□□□ -0.92
SYNGAP1-201ENST00000293748 WFDC11Q8NEX6 87 aa9.33□□□□□ -0.92
SYNGAP1-201ENST00000293748 SPG11Q96JI7 2443 aa9.33□□□□□ -0.92
SYNGAP1-201ENST00000293748 IGHG4P01861 327 aa9.33□□□□□ -0.92
SYNGAP1-201ENST00000293748 GATA3P23771 443 aa9.33□□□□□ -0.92
SYNGAP1-201ENST00000293748 ANKRD29Q8N6D5 301 aa9.33□□□□□ -0.92
SYNGAP1-201ENST00000293748 NTN5Q8WTR8 489 aaPredicted RBP9.33□□□□□ -0.92
SYNGAP1-201ENST00000293748 DSCAMO60469 2012 aa9.33□□□□□ -0.92
SYNGAP1-201ENST00000293748 SAA4P35542 130 aa9.32□□□□□ -0.92
SYNGAP1-201ENST00000293748 C8orf86Q6ZUL3 223 aa9.32□□□□□ -0.92
SYNGAP1-201ENST00000293748 PLCE1Q9P212 2302 aa9.32□□□□□ -0.92
SYNGAP1-201ENST00000293748 C15orf53Q8NAA6 179 aa9.32□□□□□ -0.92
SYNGAP1-201ENST00000293748 IGHV4-30-2A0A087WSY4 118 aa9.32□□□□□ -0.92
SYNGAP1-201ENST00000293748 USP9XQ93008 2570 aaPredicted RBP9.32□□□□□ -0.92
SYNGAP1-201ENST00000293748 IGHV1OR15-1A0A075B7D0 117 aa9.32□□□□□ -0.92
SYNGAP1-201ENST00000293748 YLPM1P49750 1951 aaKnown RBP9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 TEX48A0A1B0GUV7 120 aa9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 CFC1BP0CG36 223 aa9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 CFC1P0CG37 223 aa9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 BRD3OSQ6XYD6 125 aa9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 ZNF493Q6ZR52 646 aa9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 Q6ZVH6 145 aa9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 ATP6V0E1O15342 81 aa9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 SAP30O75446 220 aa9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 ANXA2RQ3ZCQ2 193 aa9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 TRAV26-2A0A0B4J265 109 aa9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 UBE2E1P51965 193 aa9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 ITPR1Q14643 2758 aa9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 FLNBO75369 2602 aaKnown RBP9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 TRAV13-2A0A0B4J235 113 aa9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 DEFB131AP59861 70 aa9.31□□□□□ -0.92
SYNGAP1-201ENST00000293748 LINC01545Q5VT33 79 aa9.3□□□□□ -0.92
SYNGAP1-201ENST00000293748 FAM120AOSQ5T036 256 aa9.3□□□□□ -0.92
SYNGAP1-201ENST00000293748 PCP2Q8IVA1 136 aa9.3□□□□□ -0.92
SYNGAP1-201ENST00000293748 HECTD1Q9ULT8 2610 aa9.3□□□□□ -0.92
SYNGAP1-201ENST00000293748 TRBV25-1A0A075B6N4 114 aa9.3□□□□□ -0.92
SYNGAP1-201ENST00000293748 MSMBP08118 114 aa9.3□□□□□ -0.92
SYNGAP1-201ENST00000293748 ZNF134P52741 427 aa9.3□□□□□ -0.92
SYNGAP1-201ENST00000293748 TEX36Q5VZQ5 186 aa9.3□□□□□ -0.92
SYNGAP1-201ENST00000293748 UBE2E2Q96LR5 201 aa9.3□□□□□ -0.92
SYNGAP1-201ENST00000293748 MED13LQ71F56 2210 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 J3QLI3 93 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 PRSS29PA6NIE9 313 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 KNCNA6PVL3 124 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 B5MCH6 92 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 NDUFA4O00483 81 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 ACYP1P07311 99 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 FREM2Q5SZK8 3169 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 IGLL5B9A064 214 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 NUPR1O60356 82 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 SYNJ2BPP57105 145 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 HAMPP81172 84 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 MSMPQ1L6U9 139 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 SPINK13Q1W4C9 94 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 C11orf44Q8N8P7 122 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 RNASE8Q8TDE3 154 aaKnown RBP9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 LENEPQ9Y5L5 61 aa9.29□□□□□ -0.92
SYNGAP1-201ENST00000293748 IGHV1-69DA0A0B4J2H0 117 aa9.28□□□□□ -0.92
SYNGAP1-201ENST00000293748 RPL32P62910 135 aaKnown RBP9.28□□□□□ -0.92
SYNGAP1-201ENST00000293748 ZNF491Q8N8L2 437 aa9.28□□□□□ -0.92
SYNGAP1-201ENST00000293748 MALRD1Q5VYJ5 2156 aa9.28□□□□□ -0.92
SYNGAP1-201ENST00000293748 RHOHQ15669 191 aa9.28□□□□□ -0.92
SYNGAP1-201ENST00000293748 TMEM126AQ9H061 195 aa9.28□□□□□ -0.92
SYNGAP1-201ENST00000293748 PLA2G2EQ9NZK7 142 aa9.28□□□□□ -0.92
SYNGAP1-201ENST00000293748 IGHV4-61A0A0C4DH41 118 aa9.27□□□□□ -0.92
SYNGAP1-201ENST00000293748 CDK2AP2O75956 126 aa9.27□□□□□ -0.92
SYNGAP1-201ENST00000293748 HERVK_113P63121 156 aa9.27□□□□□ -0.92
SYNGAP1-201ENST00000293748 FOXI2Q6ZQN5 318 aa9.27□□□□□ -0.92
SYNGAP1-201ENST00000293748 PFN2P35080 140 aa9.27□□□□□ -0.93
SYNGAP1-201ENST00000293748 MAPK1IP1LQ8NDC0 245 aa9.27□□□□□ -0.93
SYNGAP1-201ENST00000293748 TPSG1Q9NRR2 321 aa9.27□□□□□ -0.93
SYNGAP1-201ENST00000293748 RBMY1FQ15415 496 aaKnown RBP9.27□□□□□ -0.93
SYNGAP1-201ENST00000293748 TDRG1Q3Y452 100 aa9.27□□□□□ -0.93
SYNGAP1-201ENST00000293748 RNF166Q96A37 237 aaPredicted RBP9.27□□□□□ -0.93
SYNGAP1-201ENST00000293748 TMEM243Q9BU79 118 aa9.27□□□□□ -0.93
SYNGAP1-201ENST00000293748 CRYBA4P53673 196 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms