RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 ARMS2P0C7Q2 107 aa11.17□□□□□ -0.62
NCK1-201ENST00000288986 CDKN1BP46527 198 aa11.17□□□□□ -0.62
NCK1-201ENST00000288986 LYZL1Q6UWQ5 148 aa11.17□□□□□ -0.62
NCK1-201ENST00000288986 FER1L6-AS1Q8NA97 138 aa11.17□□□□□ -0.62
NCK1-201ENST00000288986 IGHV3OR16-12A0A075B7B8 117 aa11.17□□□□□ -0.62
NCK1-201ENST00000288986 A0A1B0GW15 77 aa11.17□□□□□ -0.62
NCK1-201ENST00000288986 C5orf52A6NGY3 159 aa11.17□□□□□ -0.62
NCK1-201ENST00000288986 J3KRW8 73 aa11.17□□□□□ -0.62
NCK1-201ENST00000288986 ZNF324O75467 553 aaPredicted RBP11.17□□□□□ -0.62
NCK1-201ENST00000288986 TSPOP30536 169 aa11.17□□□□□ -0.62
NCK1-201ENST00000288986 RNASE4P34096 147 aaKnown RBP11.17□□□□□ -0.62
NCK1-201ENST00000288986 OR11H2Q8NH07 326 aa11.17□□□□□ -0.62
NCK1-201ENST00000288986 SSBP4Q9BWG4 385 aaPredicted RBP11.17□□□□□ -0.62
NCK1-201ENST00000288986 C7orf71A4D174 169 aa11.16□□□□□ -0.62
NCK1-201ENST00000288986 AMBPP02760 352 aa11.16□□□□□ -0.62
NCK1-201ENST00000288986 RIGQ13278 110 aa11.16□□□□□ -0.62
NCK1-201ENST00000288986 DNLZQ5SXM8 178 aa11.16□□□□□ -0.62
NCK1-201ENST00000288986 GRIFINA4D1Z8 144 aa11.15□□□□□ -0.62
NCK1-201ENST00000288986 F2Z2F3 143 aa11.15□□□□□ -0.62
NCK1-201ENST00000288986 CRXO43186 299 aaPredicted RBP11.15□□□□□ -0.62
NCK1-201ENST00000288986 SNAI2O43623 268 aa11.15□□□□□ -0.62
NCK1-201ENST00000288986 CAMPP49913 170 aa11.15□□□□□ -0.62
NCK1-201ENST00000288986 COA6Q5JTJ3 125 aaKnown RBP11.15□□□□□ -0.62
NCK1-201ENST00000288986 GFI1BQ5VTD9 330 aa11.15□□□□□ -0.62
NCK1-201ENST00000288986 TMEM208Q9BTX3 173 aa11.15□□□□□ -0.62
NCK1-201ENST00000288986 INSP01308 110 aa11.14□□□□□ -0.63
NCK1-201ENST00000288986 S100A6P06703 90 aa11.14□□□□□ -0.63
NCK1-201ENST00000288986 OR5AL1P0C617 328 aa11.14□□□□□ -0.63
NCK1-201ENST00000288986 RAB4BP61018 213 aa11.14□□□□□ -0.63
NCK1-201ENST00000288986 SLAQ13239 276 aa11.14□□□□□ -0.63
NCK1-201ENST00000288986 TDRG1Q3Y452 100 aa11.14□□□□□ -0.63
NCK1-201ENST00000288986 ANXA2RQ3ZCQ2 193 aa11.14□□□□□ -0.63
NCK1-201ENST00000288986 ZNF493Q6ZR52 646 aa11.14□□□□□ -0.63
NCK1-201ENST00000288986 S100A8P05109 93 aa11.13□□□□□ -0.63
NCK1-201ENST00000288986 MED14OSP0DP75 135 aa11.13□□□□□ -0.63
NCK1-201ENST00000288986 SNRPEP62304 92 aaKnown RBP11.13□□□□□ -0.63
NCK1-201ENST00000288986 BORCS7Q96B45 105 aa11.13□□□□□ -0.63
NCK1-201ENST00000288986 GOLT1BQ9Y3E0 138 aa11.13□□□□□ -0.63
NCK1-201ENST00000288986 APCSP02743 223 aa11.13□□□□□ -0.63
NCK1-201ENST00000288986 C1orf158Q8N1D5 194 aa11.13□□□□□ -0.63
NCK1-201ENST00000288986 TPPP3Q9BW30 176 aa11.13□□□□□ -0.63
NCK1-201ENST00000288986 STAB2Q8WWQ8 2551 aa11.12□□□□□ -0.63
NCK1-201ENST00000288986 IGHV4-4A0A075B6R2 117 aa11.12□□□□□ -0.63
NCK1-201ENST00000288986 HOXA5P20719 270 aa11.12□□□□□ -0.63
NCK1-201ENST00000288986 NDUFA6P56556 154 aa11.12□□□□□ -0.63
NCK1-201ENST00000288986 ZNF705AQ6ZN79 300 aaPredicted RBP11.12□□□□□ -0.63
NCK1-201ENST00000288986 TRAV12-3A0A0B4J271 114 aa11.11□□□□□ -0.63
NCK1-201ENST00000288986 KCNS1Q96KK3 526 aa11.11□□□□□ -0.63
NCK1-201ENST00000288986 SCRT2Q9NQ03 307 aa11.11□□□□□ -0.63
NCK1-201ENST00000288986 X6R8D5 127 aa11.11□□□□□ -0.63
NCK1-201ENST00000288986 NTF3P20783 257 aa11.11□□□□□ -0.63
NCK1-201ENST00000288986 MUC21Q5SSG8 566 aa11.11□□□□□ -0.63
NCK1-201ENST00000288986 LINC01587Q99440 93 aa11.11□□□□□ -0.63
NCK1-201ENST00000288986 NAGKQ9UJ70 344 aa11.11□□□□□ -0.63
NCK1-201ENST00000288986 DEFB4AO15263 64 aa11.1□□□□□ -0.63
NCK1-201ENST00000288986 RBMY1A1P0DJD3 496 aaKnown RBP11.1□□□□□ -0.63
NCK1-201ENST00000288986 RBMY1CP0DJD4 496 aa11.1□□□□□ -0.63
NCK1-201ENST00000288986 HTN1P15515 57 aa11.1□□□□□ -0.63
NCK1-201ENST00000288986 ASIPP42127 132 aa11.1□□□□□ -0.63
NCK1-201ENST00000288986 RBMY1FQ15415 496 aaKnown RBP11.1□□□□□ -0.63
NCK1-201ENST00000288986 KIAA1644Q3SXP7 199 aa11.1□□□□□ -0.63
NCK1-201ENST00000288986 FAM159AQ6UWV7 190 aa11.1□□□□□ -0.63
NCK1-201ENST00000288986 A0A0J9YWU9 116 aa11.09□□□□□ -0.63
NCK1-201ENST00000288986 RNASE3P12724 160 aaKnown RBP11.09□□□□□ -0.63
NCK1-201ENST00000288986 MIFP14174 115 aa11.09□□□□□ -0.63
NCK1-201ENST00000288986 Q0VG73 95 aa11.09□□□□□ -0.63
NCK1-201ENST00000288986 DMRTA1Q5VZB9 504 aa11.09□□□□□ -0.63
NCK1-201ENST00000288986 H3BVH4 76 aa11.09□□□□□ -0.63
NCK1-201ENST00000288986 GNRH2O43555 120 aa11.09□□□□□ -0.63
NCK1-201ENST00000288986 CACNG7P62955 275 aa11.09□□□□□ -0.63
NCK1-201ENST00000288986 TMEM256Q8N2U0 113 aa11.09□□□□□ -0.63
NCK1-201ENST00000288986 OR10AG1Q8NH19 301 aa11.09□□□□□ -0.63
NCK1-201ENST00000288986 C20orf144Q9BQM9 153 aa11.09□□□□□ -0.63
NCK1-201ENST00000288986 IGHV4-28A0A0C4DH34 117 aa11.08□□□□□ -0.64
NCK1-201ENST00000288986 MUC21A0A0G2JKD1 596 aa11.08□□□□□ -0.64
NCK1-201ENST00000288986 MUC21A0A140T8X8 626 aa11.08□□□□□ -0.64
NCK1-201ENST00000288986 PRM2P04554 102 aa11.08□□□□□ -0.64
NCK1-201ENST00000288986 RRN3P1Q2M238 152 aa11.08□□□□□ -0.64
NCK1-201ENST00000288986 Q8NAQ8 132 aa11.08□□□□□ -0.64
NCK1-201ENST00000288986 TMEM191AQ9H0A3 160 aa11.08□□□□□ -0.64
NCK1-201ENST00000288986 MSRB1Q9NZV6 116 aa11.08□□□□□ -0.64
NCK1-201ENST00000288986 TP53TG3Q9ULZ0 132 aa11.08□□□□□ -0.64
NCK1-201ENST00000288986 IGHV1OR15-1A0A075B7D0 117 aa11.07□□□□□ -0.64
NCK1-201ENST00000288986 SMIM9A6NGZ8 99 aa11.07□□□□□ -0.64
NCK1-201ENST00000288986 SRIP30626 198 aa11.07□□□□□ -0.64
NCK1-201ENST00000288986 TWIST1Q15672 202 aa11.07□□□□□ -0.64
NCK1-201ENST00000288986 OR10J3Q5JRS4 329 aa11.07□□□□□ -0.64
NCK1-201ENST00000288986 ALKBH7Q9BT30 221 aaPredicted RBP11.07□□□□□ -0.64
NCK1-201ENST00000288986 NXPH4O95158 308 aa11.07□□□□□ -0.64
NCK1-201ENST00000288986 FAM104BQ5XKR9 115 aa11.07□□□□□ -0.64
NCK1-201ENST00000288986 LINC00467Q9BRT7 94 aa11.07□□□□□ -0.64
NCK1-201ENST00000288986 EDA2RQ9HAV5 297 aa11.07□□□□□ -0.64
NCK1-201ENST00000288986 IGHV3-16A0A0C4DH30 117 aa11.06□□□□□ -0.64
NCK1-201ENST00000288986 EMP1P54849 157 aa11.06□□□□□ -0.64
NCK1-201ENST00000288986 HIST3H2BBQ8N257 126 aa11.06□□□□□ -0.64
NCK1-201ENST00000288986 C9orf85Q96MD7 179 aa11.06□□□□□ -0.64
NCK1-201ENST00000288986 MUC4Q99102 2169 aa11.06□□□□□ -0.64
NCK1-201ENST00000288986 IFITM10A6NMD0 228 aa11.05□□□□□ -0.64
NCK1-201ENST00000288986 S100A4P26447 101 aaKnown RBP11.05□□□□□ -0.64
NCK1-201ENST00000288986 WWC2-AS2Q96NR7 200 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms