RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 IGKV2D-24A0A075B6R9 120 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 NCR2O95944 276 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 TRBV12-3P01733 135 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 STAG3L2P0CL84 134 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 STAG3L3P0CL85 134 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 DEFB135Q30KP9 77 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 S100A7L2Q5SY68 101 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 PATE2Q6UY27 113 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 OR10AG1Q8NH19 301 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 VSIRQ9H7M9 311 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 SIGLEC8Q9NYZ4 499 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 HIGD1CA8MV81 97 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 CD300EQ496F6 205 aaPredicted RBP6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 ATRAIDQ6UW56 229 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 IMMP2LQ96T52 175 aa6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 ALKBH7Q9BT30 221 aaPredicted RBP6.43□□□□□ -1.38
PTPDC1-201ENST00000288976 ANK2Q01484 3957 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 A0A087X0K7 114 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 IGHV3-38A0A0C4DH36 116 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 PAX4O43316 350 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 HLA-DQA1P01909 254 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 ZNF726P1Q15940 193 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 SLC25A2Q9BXI2 301 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 MRPL18Q9H0U6 180 aaKnown RBP6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 SMAD5-AS1Q9Y6J3 95 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 APOHP02749 345 aaPredicted RBP6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 FOLR2P14207 255 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 ERCC8Q13216 396 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 OR5A1Q8NGJ0 315 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 PRR25Q96S07 402 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 IGLL5B9A064 214 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 H3BRM9 83 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 ZNF561-AS1K7EIQ3 104 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 TRGC2P03986 189 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 HOXA5P20719 270 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 HBBP68871 147 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 OR2K2Q8NGT1 345 aa6.42□□□□□ -1.38
PTPDC1-201ENST00000288976 IGHV7-4-1A0A0J9YVY3 117 aa6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 H3BMM0 161 aa6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 UBE2WQ96B02 151 aa6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 TMEM238LA0A1B0GVL6 79 aa6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 A6NJY4 79 aa6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 ZNF138P52744 262 aa6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 TGIF2-C20orf24A0A0A6YYL0 155 aa6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 F6UB75 175 aa6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 ANGP03950 147 aaKnown RBP6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 SPATA31B1PQ5VZV4 182 aa6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 FAM167A-AS1Q96KT0 104 aa6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 EPDR1Q9UM22 224 aa6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 SLC25A20O43772 301 aa6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 C16orf54Q6UWD8 224 aa6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 SHISA2Q6UWI4 295 aa6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 RFNGQ9Y644 331 aa6.41□□□□□ -1.38
PTPDC1-201ENST00000288976 MRPS12O15235 138 aaKnown RBP6.4□□□□□ -1.38
PTPDC1-201ENST00000288976 TCRAP04437 139 aa6.4□□□□□ -1.38
PTPDC1-201ENST00000288976 PDE6HQ13956 83 aa6.4□□□□□ -1.38
PTPDC1-201ENST00000288976 TRAV2A0A0B4J234 112 aa6.4□□□□□ -1.38
PTPDC1-201ENST00000288976 UQCC3Q6UW78 93 aa6.4□□□□□ -1.38
PTPDC1-201ENST00000288976 C18orf65Q6ZTR6 163 aa6.4□□□□□ -1.38
PTPDC1-201ENST00000288976 FAM19A2Q8N3H0 131 aa6.4□□□□□ -1.38
PTPDC1-201ENST00000288976 NUDT10Q8NFP7 164 aa6.4□□□□□ -1.38
PTPDC1-201ENST00000288976 BUB3O43684 328 aa6.4□□□□□ -1.39
PTPDC1-201ENST00000288976 NXPH4O95158 308 aa6.4□□□□□ -1.39
PTPDC1-201ENST00000288976 ORMDL3Q8N138 153 aa6.4□□□□□ -1.39
PTPDC1-201ENST00000288976 SMDT1Q9H4I9 107 aa6.4□□□□□ -1.39
PTPDC1-201ENST00000288976 OTORQ9NRC9 128 aa6.4□□□□□ -1.39
PTPDC1-201ENST00000288976 FLG2Q5D862 2391 aaPredicted RBP6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 GAGE6Q13070 117 aa6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 UNQ9165/PRO28630Q6UXU0 137 aa6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 SMPXQ9UHP9 88 aa6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 TMEM213A2RRL7 107 aa6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 SMIM13P0DJ93 91 aa6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 LYPD1Q8N2G4 141 aa6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 SFRP2Q96HF1 295 aa6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 SPRY2O43597 315 aa6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 MT-ND6P03923 174 aa6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 UBE2BP63146 152 aa6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 KRTAP21-3Q3LHN1 58 aa6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 IGLC2P0DOY2 106 aa6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 DNLZQ5SXM8 178 aa6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 ZNRF2Q8NHG8 242 aa6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 RPP21Q9H633 154 aaKnown RBP6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 NOP10Q9NPE3 64 aaKnown RBP6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 CYSLTR1Q9Y271 337 aa6.39□□□□□ -1.39
PTPDC1-201ENST00000288976 TRAV9-2A0A087WT02 112 aa6.38□□□□□ -1.39
PTPDC1-201ENST00000288976 TRAV25A0A0B4J276 109 aa6.38□□□□□ -1.39
PTPDC1-201ENST00000288976 C2orf70A6NJV1 201 aa6.38□□□□□ -1.39
PTPDC1-201ENST00000288976 CCL18P55774 89 aa6.38□□□□□ -1.39
PTPDC1-201ENST00000288976 ZNF506Q5JVG8 444 aa6.38□□□□□ -1.39
PTPDC1-201ENST00000288976 C9orf66Q5T8R8 295 aa6.38□□□□□ -1.39
PTPDC1-201ENST00000288976 FXYD5Q96DB9 178 aa6.38□□□□□ -1.39
PTPDC1-201ENST00000288976 ZNF503Q96F45 646 aa6.38□□□□□ -1.39
PTPDC1-201ENST00000288976 M0R143 59 aa6.38□□□□□ -1.39
PTPDC1-201ENST00000288976 ARMS2P0C7Q2 107 aa6.38□□□□□ -1.39
PTPDC1-201ENST00000288976 AZU1P20160 251 aa6.38□□□□□ -1.39
PTPDC1-201ENST00000288976 ZFAND6Q6FIF0 208 aa6.38□□□□□ -1.39
PTPDC1-201ENST00000288976 LINC00482Q8N8I6 264 aa6.38□□□□□ -1.39
PTPDC1-201ENST00000288976 LRCOL1A6NCL2 159 aa6.38□□□□□ -1.39
PTPDC1-201ENST00000288976 Q6ZQT7 251 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms