RNA–Protein interactions for RNA: ENST00000283415.3

LPCAT1-201, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT1, Length 3,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-201ENST00000283415 UNQ9165/PRO28630Q6UXU0 137 aa10.62□□□□□ -0.71
LPCAT1-201ENST00000283415 OR9G4Q8NGQ1 327 aa10.62□□□□□ -0.71
LPCAT1-201ENST00000283415 SVEP1Q4LDE5 3571 aa10.62□□□□□ -0.71
LPCAT1-201ENST00000283415 KNCNA6PVL3 124 aa10.62□□□□□ -0.71
LPCAT1-201ENST00000283415 C11orf71Q6IPW1 123 aa10.62□□□□□ -0.71
LPCAT1-201ENST00000283415 ADAMTSL5Q6ZMM2 481 aa10.62□□□□□ -0.71
LPCAT1-201ENST00000283415 A0A0U1RRA0 63 aa10.61□□□□□ -0.71
LPCAT1-201ENST00000283415 C9orf118A6NHY6 69 aa10.61□□□□□ -0.71
LPCAT1-201ENST00000283415 GNRH2O43555 120 aa10.61□□□□□ -0.71
LPCAT1-201ENST00000283415 LYPD1Q8N2G4 141 aa10.61□□□□□ -0.71
LPCAT1-201ENST00000283415 SLC50A1Q9BRV3 221 aa10.61□□□□□ -0.71
LPCAT1-201ENST00000283415 CHTOPQ9Y3Y2 248 aaKnown RBP10.61□□□□□ -0.71
LPCAT1-201ENST00000283415 NPC2P61916 151 aa10.61□□□□□ -0.71
LPCAT1-201ENST00000283415 FAM110DQ8TAY7 271 aaPredicted RBP10.61□□□□□ -0.71
LPCAT1-201ENST00000283415 DYNLRB2Q8TF09 96 aa10.61□□□□□ -0.71
LPCAT1-201ENST00000283415 SRSF1Q07955 248 aaKnown RBP eCLIP10.61□□□□□ -0.71
LPCAT1-201ENST00000283415 SH2D6Q7Z4S9 175 aa10.61□□□□□ -0.71
LPCAT1-201ENST00000283415 Q8N6K4 173 aa10.61□□□□□ -0.71
LPCAT1-201ENST00000283415 PPBPP02775 128 aa10.6□□□□□ -0.71
LPCAT1-201ENST00000283415 RAB9AP51151 201 aa10.6□□□□□ -0.71
LPCAT1-201ENST00000283415 DEFB136Q30KP8 78 aa10.6□□□□□ -0.71
LPCAT1-201ENST00000283415 IGHV1-69DA0A0B4J2H0 117 aa10.6□□□□□ -0.71
LPCAT1-201ENST00000283415 IGHV1-69P01742 117 aa10.6□□□□□ -0.71
LPCAT1-201ENST00000283415 ID1P41134 155 aa10.6□□□□□ -0.71
LPCAT1-201ENST00000283415 SAMD13Q5VXD3 122 aa10.6□□□□□ -0.71
LPCAT1-201ENST00000283415 IGKV3OR2-268A0A0C4DH90 116 aa10.6□□□□□ -0.71
LPCAT1-201ENST00000283415 IGHV4-59P01825 116 aa10.6□□□□□ -0.71
LPCAT1-201ENST00000283415 HERVK_113P61574 105 aa10.6□□□□□ -0.71
LPCAT1-201ENST00000283415 ITLN2Q8WWU7 325 aaPredicted RBP10.6□□□□□ -0.71
LPCAT1-201ENST00000283415 RBX1P62877 108 aa10.59□□□□□ -0.71
LPCAT1-201ENST00000283415 SPINK13Q1W4C9 94 aa10.59□□□□□ -0.71
LPCAT1-201ENST00000283415 LGALS9BQ3B8N2 356 aa10.59□□□□□ -0.71
LPCAT1-201ENST00000283415 LGALS9CQ6DKI2 356 aa10.59□□□□□ -0.71
LPCAT1-201ENST00000283415 PDE6HQ13956 83 aa10.58□□□□□ -0.71
LPCAT1-201ENST00000283415 C10orf99Q6UWK7 81 aa10.58□□□□□ -0.71
LPCAT1-201ENST00000283415 BUB3O43684 328 aa10.58□□□□□ -0.72
LPCAT1-201ENST00000283415 EBI3Q14213 229 aa10.58□□□□□ -0.72
LPCAT1-201ENST00000283415 AJUBAQ96IF1 538 aa10.58□□□□□ -0.72
LPCAT1-201ENST00000283415 KIR2DL4Q99706 377 aa10.58□□□□□ -0.72
LPCAT1-201ENST00000283415 CFAP46Q8IYW2 2715 aa10.58□□□□□ -0.72
LPCAT1-201ENST00000283415 IGKV2D-26A0A0A0MRZ7 120 aa10.58□□□□□ -0.72
LPCAT1-201ENST00000283415 ANXA2RQ3ZCQ2 193 aa10.58□□□□□ -0.72
LPCAT1-201ENST00000283415 Q6ZS46 218 aa10.58□□□□□ -0.72
LPCAT1-201ENST00000283415 RPL39LQ96EH5 51 aaKnown RBP10.58□□□□□ -0.72
LPCAT1-201ENST00000283415 CSTL1Q9H114 145 aa10.58□□□□□ -0.72
LPCAT1-201ENST00000283415 TEX48A0A1B0GUV7 120 aa10.58□□□□□ -0.72
LPCAT1-201ENST00000283415 H3BRM9 83 aa10.58□□□□□ -0.72
LPCAT1-201ENST00000283415 PGPEP1Q9NXJ5 209 aa10.58□□□□□ -0.72
LPCAT1-201ENST00000283415 A0A1W2PPM0 123 aa10.57□□□□□ -0.72
LPCAT1-201ENST00000283415 CDKN1BP46527 198 aa10.57□□□□□ -0.72
LPCAT1-201ENST00000283415 DGAT2L7PQ6IED9 249 aa10.57□□□□□ -0.72
LPCAT1-201ENST00000283415 CRYBG3Q68DQ2 2970 aa10.57□□□□□ -0.72
LPCAT1-201ENST00000283415 ITPR1Q14643 2758 aa10.57□□□□□ -0.72
LPCAT1-201ENST00000283415 MSMBP08118 114 aa10.57□□□□□ -0.72
LPCAT1-201ENST00000283415 TRBV25-1A0A075B6N4 114 aa10.57□□□□□ -0.72
LPCAT1-201ENST00000283415 TRAV21A0A0B4J279 112 aa10.57□□□□□ -0.72
LPCAT1-201ENST00000283415 OOSP1A8MZH6 123 aa10.57□□□□□ -0.72
LPCAT1-201ENST00000283415 TSSC4Q9Y5U2 329 aaPredicted RBP10.57□□□□□ -0.72
LPCAT1-201ENST00000283415 LGALS3P17931 250 aaKnown RBP10.56□□□□□ -0.72
LPCAT1-201ENST00000283415 LMO4P61968 165 aa10.56□□□□□ -0.72
LPCAT1-201ENST00000283415 TRBV7-1A0A0A6YYK4 115 aa10.56□□□□□ -0.72
LPCAT1-201ENST00000283415 TRAV2A0A0B4J234 112 aa10.56□□□□□ -0.72
LPCAT1-201ENST00000283415 PRSS47A8MTI9 375 aa10.56□□□□□ -0.72
LPCAT1-201ENST00000283415 SNRPD3P62318 126 aaKnown RBP10.56□□□□□ -0.72
LPCAT1-201ENST00000283415 ZNF493Q6ZR52 646 aa10.56□□□□□ -0.72
LPCAT1-201ENST00000283415 KLHL30-AS1Q8NEE0 82 aa10.56□□□□□ -0.72
LPCAT1-201ENST00000283415 RAX2Q96IS3 184 aa10.56□□□□□ -0.72
LPCAT1-201ENST00000283415 U3KQK5 164 aa10.56□□□□□ -0.72
LPCAT1-201ENST00000283415 K7EP34 96 aa10.56□□□□□ -0.72
LPCAT1-201ENST00000283415 SLC25A16P16260 332 aa10.56□□□□□ -0.72
LPCAT1-201ENST00000283415 GAGE13Q4V321 117 aa10.56□□□□□ -0.72
LPCAT1-201ENST00000283415 HOXA3O43365 443 aaPredicted RBP10.55□□□□□ -0.72
LPCAT1-201ENST00000283415 CCDC140Q96MF4 163 aa10.55□□□□□ -0.72
LPCAT1-201ENST00000283415 WFDC2Q14508 124 aa10.55□□□□□ -0.72
LPCAT1-201ENST00000283415 SIRPDQ9H106 197 aa10.55□□□□□ -0.72
LPCAT1-201ENST00000283415 JPT2Q9H910 190 aa10.55□□□□□ -0.72
LPCAT1-201ENST00000283415 IGHG4P01861 327 aa10.55□□□□□ -0.72
LPCAT1-201ENST00000283415 C2orf66Q6UXQ4 117 aa10.55□□□□□ -0.72
LPCAT1-201ENST00000283415 C1orf122Q6ZSJ8 110 aa10.54□□□□□ -0.72
LPCAT1-201ENST00000283415 OR5A1Q8NGJ0 315 aa10.54□□□□□ -0.72
LPCAT1-201ENST00000283415 SMAD5-AS1Q9Y6J3 95 aa10.54□□□□□ -0.72
LPCAT1-201ENST00000283415 HLA-DRB4P13762 266 aa10.54□□□□□ -0.72
LPCAT1-201ENST00000283415 HLA-DRB4X5D2U9 266 aa10.54□□□□□ -0.72
LPCAT1-201ENST00000283415 B4DSR2 109 aa10.54□□□□□ -0.72
LPCAT1-201ENST00000283415 DEFB112Q30KQ8 113 aa10.54□□□□□ -0.72
LPCAT1-201ENST00000283415 TMEM238LA0A1B0GVL6 79 aa10.53□□□□□ -0.72
LPCAT1-201ENST00000283415 LINC01549A6NIU2 74 aa10.53□□□□□ -0.72
LPCAT1-201ENST00000283415 A6NJY4 79 aa10.53□□□□□ -0.72
LPCAT1-201ENST00000283415 LINC01546A6NGU7 62 aa10.53□□□□□ -0.72
LPCAT1-201ENST00000283415 C2orf91Q6ZV80 131 aa10.53□□□□□ -0.72
LPCAT1-201ENST00000283415 UBE2E2Q96LR5 201 aa10.53□□□□□ -0.72
LPCAT1-201ENST00000283415 EDN2P20800 178 aa10.53□□□□□ -0.72
LPCAT1-201ENST00000283415 RNASE13Q5GAN3 156 aaKnown RBP10.53□□□□□ -0.72
LPCAT1-201ENST00000283415 ADARB2-AS1A8MUL3 147 aa10.52□□□□□ -0.72
LPCAT1-201ENST00000283415 SUMO2P61956 95 aaKnown RBP10.52□□□□□ -0.72
LPCAT1-201ENST00000283415 C5orf56Q8N8D9 126 aa10.52□□□□□ -0.73
LPCAT1-201ENST00000283415 Q8N8P6 123 aa10.52□□□□□ -0.73
LPCAT1-201ENST00000283415 SIGMAR1Q99720 223 aa10.52□□□□□ -0.73
LPCAT1-201ENST00000283415 PRADC1Q9BSG0 188 aa10.52□□□□□ -0.73
LPCAT1-201ENST00000283415 IGHV3-53P01767 116 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms