RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 GAGE12JA6NER3 117 aa13.15□□□□□ -0.3
LRRC56-201ENST00000270115 GAGE7O76087 117 aa13.15□□□□□ -0.3
LRRC56-201ENST00000270115 GAGE12FP0CL80 117 aa13.15□□□□□ -0.3
LRRC56-201ENST00000270115 GAGE12GP0CL81 117 aa13.15□□□□□ -0.3
LRRC56-201ENST00000270115 GAGE12IP0CL82 117 aa13.15□□□□□ -0.3
LRRC56-201ENST00000270115 GAGE4Q13068 117 aa13.15□□□□□ -0.3
LRRC56-201ENST00000270115 KAAG1Q9UBP8 84 aa13.15□□□□□ -0.3
LRRC56-201ENST00000270115 IGF2RP11717 2491 aa13.15□□□□□ -0.3
LRRC56-201ENST00000270115 C11orf86A6NJI1 115 aa13.15□□□□□ -0.3
LRRC56-201ENST00000270115 SRD5A1P18405 259 aa13.15□□□□□ -0.3
LRRC56-201ENST00000270115 NDPQ00604 133 aa13.15□□□□□ -0.3
LRRC56-201ENST00000270115 C10orf126Q8N4M7 172 aa13.15□□□□□ -0.3
LRRC56-201ENST00000270115 MSRB2Q9Y3D2 182 aa13.15□□□□□ -0.3
LRRC56-201ENST00000270115 MGPP08493 103 aa13.14□□□□□ -0.31
LRRC56-201ENST00000270115 C14orf178Q8N769 122 aaPredicted RBP13.14□□□□□ -0.31
LRRC56-201ENST00000270115 DUSP14O95147 198 aaKnown RBP13.14□□□□□ -0.31
LRRC56-201ENST00000270115 ARL3P36405 182 aa13.14□□□□□ -0.31
LRRC56-201ENST00000270115 RNASE6Q93091 150 aaKnown RBP13.14□□□□□ -0.31
LRRC56-201ENST00000270115 PRO1854Q9UHT4 67 aa13.14□□□□□ -0.31
LRRC56-201ENST00000270115 SVEP1Q4LDE5 3571 aa13.13□□□□□ -0.31
LRRC56-201ENST00000270115 IGHV3-30P01768 117 aa13.13□□□□□ -0.31
LRRC56-201ENST00000270115 IGHV3-30-5P0DP03 117 aa13.13□□□□□ -0.31
LRRC56-201ENST00000270115 NTN5Q8WTR8 489 aaPredicted RBP13.13□□□□□ -0.31
LRRC56-201ENST00000270115 SLC50A1Q9BRV3 221 aa13.13□□□□□ -0.31
LRRC56-201ENST00000270115 TSPEAR-AS2P59090 65 aa13.13□□□□□ -0.31
LRRC56-201ENST00000270115 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.13□□□□□ -0.31
LRRC56-201ENST00000270115 RNF5Q99942 180 aa13.13□□□□□ -0.31
LRRC56-201ENST00000270115 LY6LH3BQJ8 138 aa13.12□□□□□ -0.31
LRRC56-201ENST00000270115 CRYGDP07320 174 aa13.12□□□□□ -0.31
LRRC56-201ENST00000270115 IFITM1P13164 125 aa13.12□□□□□ -0.31
LRRC56-201ENST00000270115 RPL32P62910 135 aaKnown RBP13.12□□□□□ -0.31
LRRC56-201ENST00000270115 IGF1P05019 195 aa13.11□□□□□ -0.31
LRRC56-201ENST00000270115 TMEM170BQ5T4T1 132 aa13.11□□□□□ -0.31
LRRC56-201ENST00000270115 FAM159AQ6UWV7 190 aa13.11□□□□□ -0.31
LRRC56-201ENST00000270115 SPTA1P02549 2419 aa13.11□□□□□ -0.31
LRRC56-201ENST00000270115 PRR9Q5T870 116 aa13.1□□□□□ -0.31
LRRC56-201ENST00000270115 Q8N1Y9 231 aa13.1□□□□□ -0.31
LRRC56-201ENST00000270115 TLN1Q9Y490 2541 aaKnown RBP13.1□□□□□ -0.31
LRRC56-201ENST00000270115 HERVK_113P61574 105 aa13.09□□□□□ -0.31
LRRC56-201ENST00000270115 BEX4Q9NWD9 120 aaPredicted RBP13.09□□□□□ -0.31
LRRC56-201ENST00000270115 IGLV4-69A0A075B6H9 119 aa13.09□□□□□ -0.31
LRRC56-201ENST00000270115 BUB3O43684 328 aa13.09□□□□□ -0.31
LRRC56-201ENST00000270115 IGHV4-39P01824 125 aa13.09□□□□□ -0.31
LRRC56-201ENST00000270115 ABCA4P78363 2273 aa13.09□□□□□ -0.31
LRRC56-201ENST00000270115 LRBAP50851 2863 aa13.09□□□□□ -0.31
LRRC56-201ENST00000270115 IGHV4-4A0A075B6R2 117 aa13.09□□□□□ -0.31
LRRC56-201ENST00000270115 TEX49A0A1B0GTD5 131 aa13.09□□□□□ -0.31
LRRC56-201ENST00000270115 A4D1N5 150 aa13.09□□□□□ -0.31
LRRC56-201ENST00000270115 RBAKDNA6NC62 111 aa13.09□□□□□ -0.31
LRRC56-201ENST00000270115 ELANEP08246 267 aa13.09□□□□□ -0.31
LRRC56-201ENST00000270115 FAM110AQ9BQ89 295 aa13.09□□□□□ -0.31
LRRC56-201ENST00000270115 RNF223E7ERA6 249 aa13.08□□□□□ -0.32
LRRC56-201ENST00000270115 TSHBP01222 138 aa13.08□□□□□ -0.32
LRRC56-201ENST00000270115 S100A4P26447 101 aaKnown RBP13.08□□□□□ -0.32
LRRC56-201ENST00000270115 ASIPP42127 132 aa13.08□□□□□ -0.32
LRRC56-201ENST00000270115 SLC25A29Q8N8R3 303 aa13.08□□□□□ -0.32
LRRC56-201ENST00000270115 TIMD4Q96H15 378 aa13.08□□□□□ -0.32
LRRC56-201ENST00000270115 NBASA2RRP1 2371 aa13.08□□□□□ -0.32
LRRC56-201ENST00000270115 EIF4EBP3O60516 100 aaPredicted RBP13.07□□□□□ -0.32
LRRC56-201ENST00000270115 Q1RN00 199 aa13.07□□□□□ -0.32
LRRC56-201ENST00000270115 C3orf56Q8N813 242 aa13.07□□□□□ -0.32
LRRC56-201ENST00000270115 DPM3Q9P2X0 92 aa13.07□□□□□ -0.32
LRRC56-201ENST00000270115 TP53TG1Q9Y2A0 90 aa13.07□□□□□ -0.32
LRRC56-201ENST00000270115 CLEC3BP05452 202 aa13.07□□□□□ -0.32
LRRC56-201ENST00000270115 RPL39P62891 51 aaKnown RBP13.07□□□□□ -0.32
LRRC56-201ENST00000270115 C15orf53Q8NAA6 179 aa13.07□□□□□ -0.32
LRRC56-201ENST00000270115 DCHS2Q6V1P9 2916 aa13.07□□□□□ -0.32
LRRC56-201ENST00000270115 NPBQ8NG41 125 aa13.06□□□□□ -0.32
LRRC56-201ENST00000270115 CHD8Q9HCK8 2581 aa13.06□□□□□ -0.32
LRRC56-201ENST00000270115 DPH3P1Q9H4G8 78 aa13.06□□□□□ -0.32
LRRC56-201ENST00000270115 TRAV2A0A0B4J234 112 aa13.05□□□□□ -0.32
LRRC56-201ENST00000270115 SCGB2A1O75556 95 aa13.05□□□□□ -0.32
LRRC56-201ENST00000270115 IGFL3Q6UXB1 125 aa13.05□□□□□ -0.32
LRRC56-201ENST00000270115 PHLDA3Q9Y5J5 127 aa13.05□□□□□ -0.32
LRRC56-201ENST00000270115 IGHV3-64A0A075B6Q5 118 aa13.05□□□□□ -0.32
LRRC56-201ENST00000270115 TRAV8-4A0A0B4J246 113 aa13.05□□□□□ -0.32
LRRC56-201ENST00000270115 IGHV3-33P01772 117 aa13.05□□□□□ -0.32
LRRC56-201ENST00000270115 C15orf32Q32M92 178 aa13.05□□□□□ -0.32
LRRC56-201ENST00000270115 ODF3Q96PU9 254 aa13.05□□□□□ -0.32
LRRC56-201ENST00000270115 E7EQL1 145 aa13.04□□□□□ -0.32
LRRC56-201ENST00000270115 DEFB1P60022 68 aa13.04□□□□□ -0.32
LRRC56-201ENST00000270115 ZFAND3Q9H8U3 227 aa13.04□□□□□ -0.32
LRRC56-201ENST00000270115 MED13LQ71F56 2210 aa13.04□□□□□ -0.32
LRRC56-201ENST00000270115 LGALS3P17931 250 aaKnown RBP13.03□□□□□ -0.32
LRRC56-201ENST00000270115 ZNRF2Q8NHG8 242 aa13.03□□□□□ -0.32
LRRC56-201ENST00000270115 PTPRQQ9UMZ3 2332 aa13.03□□□□□ -0.32
LRRC56-201ENST00000270115 ATRXP46100 2492 aa13.03□□□□□ -0.32
LRRC56-201ENST00000270115 J3QQQ9 107 aa13.03□□□□□ -0.32
LRRC56-201ENST00000270115 PMVKQ15126 192 aa13.03□□□□□ -0.32
LRRC56-201ENST00000270115 MEIG1Q5JSS6 88 aa13.03□□□□□ -0.32
LRRC56-201ENST00000270115 NCOR2Q9Y618 2525 aa13.02□□□□□ -0.32
LRRC56-201ENST00000270115 A0A0G2JNJ9 132 aa13.02□□□□□ -0.32
LRRC56-201ENST00000270115 ECSCRQ19T08 205 aa13.02□□□□□ -0.32
LRRC56-201ENST00000270115 LINC01620Q4KN68 170 aa13.02□□□□□ -0.32
LRRC56-201ENST00000270115 CLEC19AQ6UXS0 136 aa13.02□□□□□ -0.32
LRRC56-201ENST00000270115 TMEM263Q8WUH6 116 aaKnown RBP13.02□□□□□ -0.32
LRRC56-201ENST00000270115 Q9UFV3 132 aa13.02□□□□□ -0.32
LRRC56-201ENST00000270115 CLPSL1A2RUU4 121 aa13.02□□□□□ -0.33
LRRC56-201ENST00000270115 BRI3O95415 125 aa13.01□□□□□ -0.33
LRRC56-201ENST00000270115 GPHB5Q86YW7 130 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms