RNA–Protein interactions for RNA: ENST00000267260.4

SRRM4-201, Transcript of serine/arginine repetitive matrix 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRM4, Length 8,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-201ENST00000267260 C4orf48Q5BLP8 95 aa9.65□□□□□ -0.87
SRRM4-201ENST00000267260 MYO9AB2RTY4 2548 aa9.65□□□□□ -0.87
SRRM4-201ENST00000267260 ETV2O00321 342 aaPredicted RBP9.64□□□□□ -0.87
SRRM4-201ENST00000267260 LENEPQ9Y5L5 61 aa9.64□□□□□ -0.87
SRRM4-201ENST00000267260 IGHV3-38A0A0C4DH36 116 aa9.64□□□□□ -0.87
SRRM4-201ENST00000267260 IGLL5B9A064 214 aa9.64□□□□□ -0.87
SRRM4-201ENST00000267260 IGLC1P0CG04 106 aa9.64□□□□□ -0.87
SRRM4-201ENST00000267260 PDE6GP18545 87 aa9.64□□□□□ -0.87
SRRM4-201ENST00000267260 MBD3L4A6NDZ8 208 aaPredicted RBP9.64□□□□□ -0.87
SRRM4-201ENST00000267260 MBD3L3A6NE82 208 aaPredicted RBP9.64□□□□□ -0.87
SRRM4-201ENST00000267260 MBD3L5A6NJ08 208 aaPredicted RBP9.64□□□□□ -0.87
SRRM4-201ENST00000267260 TMEM256-PLSCR3K7ERE1 68 aa9.64□□□□□ -0.87
SRRM4-201ENST00000267260 ATP6V0E1O15342 81 aa9.64□□□□□ -0.87
SRRM4-201ENST00000267260 FOXI1Q12951 378 aa9.64□□□□□ -0.87
SRRM4-201ENST00000267260 MBD3L2Q8NHZ7 208 aaPredicted RBP9.64□□□□□ -0.87
SRRM4-201ENST00000267260 XCL1P47992 114 aa9.64□□□□□ -0.87
SRRM4-201ENST00000267260 G3V4G9 280 aa9.64□□□□□ -0.87
SRRM4-201ENST00000267260 MPLKIPQ8TAP9 179 aa9.64□□□□□ -0.87
SRRM4-201ENST00000267260 CPAMD8Q8IZJ3 1885 aa9.64□□□□□ -0.87
SRRM4-201ENST00000267260 LTBP1Q14766 1721 aa9.64□□□□□ -0.87
SRRM4-201ENST00000267260 ATP5EP56381 51 aaPredicted RBP9.64□□□□□ -0.87
SRRM4-201ENST00000267260 WIPF2Q8TF74 440 aaPredicted RBP9.64□□□□□ -0.87
SRRM4-201ENST00000267260 ZNF503Q96F45 646 aa9.64□□□□□ -0.87
SRRM4-201ENST00000267260 VOPP1Q96AW1 172 aa9.63□□□□□ -0.87
SRRM4-201ENST00000267260 TRAV26-1A0A087WT03 109 aa9.63□□□□□ -0.87
SRRM4-201ENST00000267260 A0A087WV48 116 aa9.63□□□□□ -0.87
SRRM4-201ENST00000267260 RPL18AQ02543 176 aaKnown RBP9.63□□□□□ -0.87
SRRM4-201ENST00000267260 TMEM61Q8N0U2 210 aa9.63□□□□□ -0.87
SRRM4-201ENST00000267260 RAI1Q7Z5J4 1906 aaPredicted RBP9.63□□□□□ -0.87
SRRM4-201ENST00000267260 IGHV1-69DA0A0B4J2H0 117 aa9.63□□□□□ -0.87
SRRM4-201ENST00000267260 FOXE3Q13461 319 aa9.63□□□□□ -0.87
SRRM4-201ENST00000267260 H3BUA1 57 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 ZC2HC1AQ96GY0 325 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 A0A0U1RQV1 116 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 K7EM74 188 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 PRDM6Q9NQX0 595 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 PINLYPA6NC86 204 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 Q6ZUT4 128 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 IGHV4-4A0A075B6R2 117 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 CLPSL2Q6UWE3 100 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 FLVCR1-AS1Q8TAF5 88 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 C11orf52Q96A22 123 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 BPESC1Q9GZL8 116 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 TRBV12-3P01733 135 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 LGALS9O00182 355 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 IGKV1-39P01597 117 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 IGKV1D-39P04432 117 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 SND1-IT1Q9HBX3 110 aa9.62□□□□□ -0.87
SRRM4-201ENST00000267260 Q71RC1 249 aaPredicted RBP9.61□□□□□ -0.87
SRRM4-201ENST00000267260 IGHV1-69P01742 117 aa9.61□□□□□ -0.87
SRRM4-201ENST00000267260 LMO1P25800 156 aa9.61□□□□□ -0.87
SRRM4-201ENST00000267260 GATA4P43694 442 aa9.61□□□□□ -0.87
SRRM4-201ENST00000267260 PCP2Q8IVA1 136 aa9.61□□□□□ -0.87
SRRM4-201ENST00000267260 IGKV2D-24A0A075B6R9 120 aa9.61□□□□□ -0.87
SRRM4-201ENST00000267260 UQCRQO14949 82 aa9.61□□□□□ -0.87
SRRM4-201ENST00000267260 C9orf47Q6ZRZ4 202 aa9.61□□□□□ -0.87
SRRM4-201ENST00000267260 WIPF3A6NGB9 483 aa9.61□□□□□ -0.87
SRRM4-201ENST00000267260 TRAV4A0A0B4J268 109 aa9.61□□□□□ -0.87
SRRM4-201ENST00000267260 EPOPA6NHQ4 379 aa9.61□□□□□ -0.87
SRRM4-201ENST00000267260 RNASE13Q5GAN3 156 aaKnown RBP9.61□□□□□ -0.87
SRRM4-201ENST00000267260 CASC2Q6XLA1 102 aa9.61□□□□□ -0.87
SRRM4-201ENST00000267260 FAM236DA0A1B0GTK5 79 aa9.6□□□□□ -0.87
SRRM4-201ENST00000267260 IGKV4-1P06312 121 aa9.6□□□□□ -0.87
SRRM4-201ENST00000267260 FAM236CP0DP71 79 aa9.6□□□□□ -0.87
SRRM4-201ENST00000267260 LY6DQ14210 128 aa9.6□□□□□ -0.87
SRRM4-201ENST00000267260 ZNF747Q9BV97 191 aa9.6□□□□□ -0.87
SRRM4-201ENST00000267260 C2CD3Q4AC94 2353 aa9.6□□□□□ -0.87
SRRM4-201ENST00000267260 TEX36Q5VZQ5 186 aa9.6□□□□□ -0.87
SRRM4-201ENST00000267260 LTAP01374 205 aa9.6□□□□□ -0.87
SRRM4-201ENST00000267260 TIRAPP58753 221 aa9.6□□□□□ -0.87
SRRM4-201ENST00000267260 H3BT86 120 aa9.6□□□□□ -0.87
SRRM4-201ENST00000267260 NDUFV3P56181 108 aaKnown RBP9.6□□□□□ -0.87
SRRM4-201ENST00000267260 IGHV7-4-1A0A0J9YVY3 117 aa9.6□□□□□ -0.87
SRRM4-201ENST00000267260 Q8TCH9 128 aa9.6□□□□□ -0.87
SRRM4-201ENST00000267260 RNF183Q96D59 192 aa9.59□□□□□ -0.87
SRRM4-201ENST00000267260 LYPD2Q6UXB3 125 aa9.59□□□□□ -0.87
SRRM4-201ENST00000267260 LINC00311Q8N616 119 aa9.59□□□□□ -0.87
SRRM4-201ENST00000267260 FXYD5Q96DB9 178 aa9.59□□□□□ -0.87
SRRM4-201ENST00000267260 UPK3BQ9BT76 320 aa9.59□□□□□ -0.87
SRRM4-201ENST00000267260 TRBV10-2A0A0K0K1G8 114 aa9.59□□□□□ -0.87
SRRM4-201ENST00000267260 MUC6Q6W4X9 2439 aa9.59□□□□□ -0.87
SRRM4-201ENST00000267260 HIVEP2P31629 2446 aa9.59□□□□□ -0.87
SRRM4-201ENST00000267260 LRP4O75096 1905 aa9.59□□□□□ -0.87
SRRM4-201ENST00000267260 COX7A2LO14548 114 aa9.58□□□□□ -0.88
SRRM4-201ENST00000267260 KLF2Q9Y5W3 355 aaPredicted RBP9.58□□□□□ -0.88
SRRM4-201ENST00000267260 Q6ZRM9 215 aa9.58□□□□□ -0.88
SRRM4-201ENST00000267260 A0A0G2JRQ6 117 aa9.58□□□□□ -0.88
SRRM4-201ENST00000267260 HIGD1BQ9P298 99 aa9.58□□□□□ -0.88
SRRM4-201ENST00000267260 LINC00643Q86TS7 51 aa9.58□□□□□ -0.88
SRRM4-201ENST00000267260 C16orf74Q96GX8 76 aa9.57□□□□□ -0.88
SRRM4-201ENST00000267260 TEX22C9J3V5 150 aa9.57□□□□□ -0.88
SRRM4-201ENST00000267260 H0Y9J4 135 aa9.57□□□□□ -0.88
SRRM4-201ENST00000267260 HIST2H2BCQ6DN03 193 aa9.57□□□□□ -0.88
SRRM4-201ENST00000267260 COL8A2P25067 703 aa9.57□□□□□ -0.88
SRRM4-201ENST00000267260 A4D1N5 150 aa9.57□□□□□ -0.88
SRRM4-201ENST00000267260 USP17L23D6RBM5 183 aa9.57□□□□□ -0.88
SRRM4-201ENST00000267260 WFDC2Q14508 124 aa9.57□□□□□ -0.88
SRRM4-201ENST00000267260 TIMM17AQ99595 171 aa9.57□□□□□ -0.88
SRRM4-201ENST00000267260 E7EQL1 145 aa9.57□□□□□ -0.88
SRRM4-201ENST00000267260 C20orf173Q96LM9 149 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms