RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 PRO0461Q9UI25 63 aa9.7□□□□□ -0.86
PRPF6-201ENST00000266079 HLA-DRB4X5D2U9 266 aa9.7□□□□□ -0.86
PRPF6-201ENST00000266079 ATP5G2Q06055 141 aa9.69□□□□□ -0.86
PRPF6-201ENST00000266079 C12orf74Q32Q52 190 aa9.69□□□□□ -0.86
PRPF6-201ENST00000266079 HIST2H2BDQ6DRA6 164 aa9.69□□□□□ -0.86
PRPF6-201ENST00000266079 LCNL1Q6ZST4 164 aa9.69□□□□□ -0.86
PRPF6-201ENST00000266079 LYPD1Q8N2G4 141 aa9.69□□□□□ -0.86
PRPF6-201ENST00000266079 GEMIN7Q9H840 131 aaKnown RBP9.69□□□□□ -0.86
PRPF6-201ENST00000266079 VPREB3Q9UKI3 123 aa9.69□□□□□ -0.86
PRPF6-201ENST00000266079 NPIPB5A8MRT5 1133 aa9.69□□□□□ -0.86
PRPF6-201ENST00000266079 PRSS1P07477 247 aa9.69□□□□□ -0.86
PRPF6-201ENST00000266079 FCER1GP30273 86 aa9.69□□□□□ -0.86
PRPF6-201ENST00000266079 INSL3P51460 131 aa9.69□□□□□ -0.86
PRPF6-201ENST00000266079 TAL2Q16559 108 aa9.69□□□□□ -0.86
PRPF6-201ENST00000266079 IGHV3-23P01764 117 aa9.69□□□□□ -0.86
PRPF6-201ENST00000266079 EGR2P11161 476 aaPredicted RBP9.69□□□□□ -0.86
PRPF6-201ENST00000266079 AMTNQ6UX39 209 aa9.69□□□□□ -0.86
PRPF6-201ENST00000266079 C9orf139Q6ZV77 190 aa9.69□□□□□ -0.86
PRPF6-201ENST00000266079 LINC01546A6NGU7 62 aa9.68□□□□□ -0.86
PRPF6-201ENST00000266079 LEPP41159 167 aa9.68□□□□□ -0.86
PRPF6-201ENST00000266079 ZC2HC1BQ5TFG8 222 aa9.68□□□□□ -0.86
PRPF6-201ENST00000266079 MAP1LC3AQ9H492 121 aa9.68□□□□□ -0.86
PRPF6-201ENST00000266079 DNAJC9-AS1A6NH13 148 aa9.68□□□□□ -0.86
PRPF6-201ENST00000266079 SH2D1AO60880 128 aa9.68□□□□□ -0.86
PRPF6-201ENST00000266079 DPM2O94777 84 aa9.68□□□□□ -0.86
PRPF6-201ENST00000266079 MRPL16Q9NX20 251 aaKnown RBP9.68□□□□□ -0.86
PRPF6-201ENST00000266079 M0R3E3 92 aa9.67□□□□□ -0.86
PRPF6-201ENST00000266079 RRN3P1Q2M238 152 aa9.67□□□□□ -0.86
PRPF6-201ENST00000266079 C10orf99Q6UWK7 81 aa9.67□□□□□ -0.86
PRPF6-201ENST00000266079 SHANK2-AS3Q9BTD1 123 aa9.67□□□□□ -0.86
PRPF6-201ENST00000266079 AGRNO00468 2067 aa9.67□□□□□ -0.86
PRPF6-201ENST00000266079 TWIST1Q15672 202 aa9.67□□□□□ -0.86
PRPF6-201ENST00000266079 LINC01559Q495D7 138 aa9.67□□□□□ -0.86
PRPF6-201ENST00000266079 MTURNQ8N3F0 131 aa9.67□□□□□ -0.86
PRPF6-201ENST00000266079 TTC9CQ8N5M4 171 aa9.67□□□□□ -0.86
PRPF6-201ENST00000266079 A0A1B0GWB2 263 aa9.66□□□□□ -0.86
PRPF6-201ENST00000266079 H3BRN7 92 aa9.66□□□□□ -0.86
PRPF6-201ENST00000266079 ATP5LO75964 103 aa9.66□□□□□ -0.86
PRPF6-201ENST00000266079 MAPKAPK5-AS1Q8N8E1 139 aa9.66□□□□□ -0.86
PRPF6-201ENST00000266079 C20orf78Q9BR46 151 aa9.66□□□□□ -0.86
PRPF6-201ENST00000266079 C8orf86Q6ZUL3 223 aa9.65□□□□□ -0.86
PRPF6-201ENST00000266079 ZNF418Q8TF45 676 aaPredicted RBP9.65□□□□□ -0.86
PRPF6-201ENST00000266079 RNF185Q96GF1 192 aa9.65□□□□□ -0.86
PRPF6-201ENST00000266079 NXT2Q9NPJ8 142 aaKnown RBP9.65□□□□□ -0.86
PRPF6-201ENST00000266079 MRPS12O15235 138 aaKnown RBP9.65□□□□□ -0.86
PRPF6-201ENST00000266079 APOMO95445 188 aa9.65□□□□□ -0.86
PRPF6-201ENST00000266079 IGKV1-17P01599 117 aa9.65□□□□□ -0.86
PRPF6-201ENST00000266079 TEX29Q8N6K0 151 aa9.65□□□□□ -0.86
PRPF6-201ENST00000266079 CYSLTR1Q9Y271 337 aa9.65□□□□□ -0.86
PRPF6-201ENST00000266079 TRAV41A0A0B4J266 112 aa9.64□□□□□ -0.87
PRPF6-201ENST00000266079 FOXI1Q12951 378 aa9.64□□□□□ -0.87
PRPF6-201ENST00000266079 TMEM160Q9NX00 188 aa9.64□□□□□ -0.87
PRPF6-201ENST00000266079 IGHV3-35A0A0C4DH35 117 aa9.64□□□□□ -0.87
PRPF6-201ENST00000266079 I3L2K1 104 aa9.64□□□□□ -0.87
PRPF6-201ENST00000266079 IGLC6P0CF74 106 aa9.64□□□□□ -0.87
PRPF6-201ENST00000266079 TMEM158Q8WZ71 300 aa9.64□□□□□ -0.87
PRPF6-201ENST00000266079 HIST1H4GQ99525 98 aa9.64□□□□□ -0.87
PRPF6-201ENST00000266079 TENM1Q9UKZ4 2725 aa9.64□□□□□ -0.87
PRPF6-201ENST00000266079 CDIP1Q9H305 208 aa9.64□□□□□ -0.87
PRPF6-201ENST00000266079 GAS8-AS1O95177 125 aa9.63□□□□□ -0.87
PRPF6-201ENST00000266079 TNFRSF6BO95407 300 aa9.63□□□□□ -0.87
PRPF6-201ENST00000266079 IGHG2P01859 326 aa9.63□□□□□ -0.87
PRPF6-201ENST00000266079 COX8CQ7Z4L0 72 aa9.63□□□□□ -0.87
PRPF6-201ENST00000266079 C11orf44Q8N8P7 122 aa9.63□□□□□ -0.87
PRPF6-201ENST00000266079 SYT8Q8NBV8 401 aa9.63□□□□□ -0.87
PRPF6-201ENST00000266079 ATP6V0E2Q8NHE4 81 aa9.63□□□□□ -0.87
PRPF6-201ENST00000266079 AAMDCQ9H7C9 122 aa9.63□□□□□ -0.87
PRPF6-201ENST00000266079 SPINK8P0C7L1 97 aa9.63□□□□□ -0.87
PRPF6-201ENST00000266079 PF4V1P10720 104 aa9.63□□□□□ -0.87
PRPF6-201ENST00000266079 FANCD2OSQ96PS1 177 aa9.63□□□□□ -0.87
PRPF6-201ENST00000266079 C1QTNF4Q9BXJ3 329 aa9.63□□□□□ -0.87
PRPF6-201ENST00000266079 KLK15Q9H2R5 256 aa9.63□□□□□ -0.87
PRPF6-201ENST00000266079 MRPL35Q9NZE8 188 aaKnown RBP9.63□□□□□ -0.87
PRPF6-201ENST00000266079 MSRB1Q9NZV6 116 aa9.63□□□□□ -0.87
PRPF6-201ENST00000266079 TRBV7-3A0A075B6L6 115 aa9.62□□□□□ -0.87
PRPF6-201ENST00000266079 IGHV3-11P01762 117 aa9.62□□□□□ -0.87
PRPF6-201ENST00000266079 PPIFP30405 207 aaKnown RBP9.62□□□□□ -0.87
PRPF6-201ENST00000266079 ZNF491Q8N8L2 437 aa9.62□□□□□ -0.87
PRPF6-201ENST00000266079 PDE6HQ13956 83 aa9.61□□□□□ -0.87
PRPF6-201ENST00000266079 PRR25Q96S07 402 aa9.61□□□□□ -0.87
PRPF6-201ENST00000266079 ZNF702PQ9H963 129 aa9.61□□□□□ -0.87
PRPF6-201ENST00000266079 NOTCH3Q9UM47 2321 aa9.61□□□□□ -0.87
PRPF6-201ENST00000266079 IGHV3OR16-8A0A075B7F1 116 aa9.61□□□□□ -0.87
PRPF6-201ENST00000266079 LINC01619G3V211 115 aa9.61□□□□□ -0.87
PRPF6-201ENST00000266079 Q8N8P6 123 aa9.61□□□□□ -0.87
PRPF6-201ENST00000266079 RNF125Q96EQ8 232 aa9.61□□□□□ -0.87
PRPF6-201ENST00000266079 TSPAN13O95857 204 aa9.61□□□□□ -0.87
PRPF6-201ENST00000266079 C15orf32Q32M92 178 aa9.61□□□□□ -0.87
PRPF6-201ENST00000266079 CFAP126Q5VTH2 177 aa9.61□□□□□ -0.87
PRPF6-201ENST00000266079 K7EIM0 57 aa9.6□□□□□ -0.87
PRPF6-201ENST00000266079 MT-ATP8P03928 68 aa9.6□□□□□ -0.87
PRPF6-201ENST00000266079 TRGV3P03979 118 aa9.6□□□□□ -0.87
PRPF6-201ENST00000266079 ZNF80P51504 273 aaPredicted RBP9.6□□□□□ -0.87
PRPF6-201ENST00000266079 MORN3Q6PF18 240 aaPredicted RBP9.6□□□□□ -0.87
PRPF6-201ENST00000266079 ZNF575Q86XF7 245 aa9.6□□□□□ -0.87
PRPF6-201ENST00000266079 IGKV2-40A0A087WW87 121 aaPredicted RBP9.6□□□□□ -0.87
PRPF6-201ENST00000266079 IGKV2D-40P01614 121 aaPredicted RBP9.6□□□□□ -0.87
PRPF6-201ENST00000266079 IL4P05112 153 aa9.6□□□□□ -0.87
PRPF6-201ENST00000266079 GATA1P15976 413 aaPredicted RBP9.6□□□□□ -0.87
PRPF6-201ENST00000266079 SMCPP49901 116 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms