RNA–Protein interactions for RNA: ENST00000261799.8

PDGFRB-201, Transcript of platelet derived growth factor receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRB, Length 5,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-201ENST00000261799 HEATR1Q9H583 2144 aaKnown RBP10.45□□□□□ -0.74
PDGFRB-201ENST00000261799 VSIG2Q96IQ7 327 aa10.45□□□□□ -0.74
PDGFRB-201ENST00000261799 CYYR1Q96J86 154 aa10.45□□□□□ -0.74
PDGFRB-201ENST00000261799 KIF26BQ2KJY2 2108 aa10.44□□□□□ -0.74
PDGFRB-201ENST00000261799 LY6G6CO95867 125 aa10.44□□□□□ -0.74
PDGFRB-201ENST00000261799 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.44□□□□□ -0.74
PDGFRB-201ENST00000261799 KLK12Q9UKR0 248 aa10.44□□□□□ -0.74
PDGFRB-201ENST00000261799 TEX22C9J3V5 150 aa10.44□□□□□ -0.74
PDGFRB-201ENST00000261799 EGR2P11161 476 aaPredicted RBP10.44□□□□□ -0.74
PDGFRB-201ENST00000261799 NFE4Q86UQ8 179 aa10.44□□□□□ -0.74
PDGFRB-201ENST00000261799 Q8N1Y9 231 aa10.44□□□□□ -0.74
PDGFRB-201ENST00000261799 NPYP01303 97 aa10.43□□□□□ -0.74
PDGFRB-201ENST00000261799 C9orf47Q6ZRZ4 202 aa10.43□□□□□ -0.74
PDGFRB-201ENST00000261799 SPTBN2O15020 2390 aa10.43□□□□□ -0.74
PDGFRB-201ENST00000261799 WISP2O76076 250 aa10.43□□□□□ -0.74
PDGFRB-201ENST00000261799 CRYGDP07320 174 aa10.43□□□□□ -0.74
PDGFRB-201ENST00000261799 CXCL5P42830 114 aa10.43□□□□□ -0.74
PDGFRB-201ENST00000261799 FAM110AQ9BQ89 295 aa10.43□□□□□ -0.74
PDGFRB-201ENST00000261799 GTSF1Q8WW33 167 aa10.43□□□□□ -0.74
PDGFRB-201ENST00000261799 hADV29S1A0JD25 119 aa10.42□□□□□ -0.74
PDGFRB-201ENST00000261799 FSTL3O95633 263 aa10.42□□□□□ -0.74
PDGFRB-201ENST00000261799 C3orf79P0CE67 100 aa10.42□□□□□ -0.74
PDGFRB-201ENST00000261799 MBD6Q96DN6 1003 aa10.42□□□□□ -0.74
PDGFRB-201ENST00000261799 RIF1Q5UIP0 2472 aaKnown RBP10.42□□□□□ -0.74
PDGFRB-201ENST00000261799 COL6A6A6NMZ7 2263 aa10.42□□□□□ -0.74
PDGFRB-201ENST00000261799 MIFP14174 115 aa10.42□□□□□ -0.74
PDGFRB-201ENST00000261799 C11orf71Q6IPW1 123 aa10.42□□□□□ -0.74
PDGFRB-201ENST00000261799 COX7B2Q8TF08 81 aa10.42□□□□□ -0.74
PDGFRB-201ENST00000261799 C9orf153Q5TBE3 101 aa10.42□□□□□ -0.74
PDGFRB-201ENST00000261799 C7orf33Q8WU49 177 aa10.42□□□□□ -0.74
PDGFRB-201ENST00000261799 A8MWP6 167 aa10.42□□□□□ -0.74
PDGFRB-201ENST00000261799 CEP250Q9BV73 2442 aa10.41□□□□□ -0.74
PDGFRB-201ENST00000261799 TRBV12-3P01733 135 aa10.41□□□□□ -0.74
PDGFRB-201ENST00000261799 A0A087X0K7 114 aa10.41□□□□□ -0.74
PDGFRB-201ENST00000261799 UBL5Q9BZL1 73 aa10.41□□□□□ -0.74
PDGFRB-201ENST00000261799 Q9H8V8 135 aa10.41□□□□□ -0.74
PDGFRB-201ENST00000261799 IGHV4-4A0A075B6R2 117 aa10.41□□□□□ -0.74
PDGFRB-201ENST00000261799 TRAV26-1A0A087WT03 109 aa10.41□□□□□ -0.74
PDGFRB-201ENST00000261799 HIST1H2BLQ99880 126 aa10.4□□□□□ -0.74
PDGFRB-201ENST00000261799 V9GYV3 84 aa10.4□□□□□ -0.74
PDGFRB-201ENST00000261799 Q6ZSR3 168 aa10.4□□□□□ -0.74
PDGFRB-201ENST00000261799 J3QQQ9 107 aa10.4□□□□□ -0.74
PDGFRB-201ENST00000261799 BVES-AS1Q5T3Y7 98 aa10.4□□□□□ -0.74
PDGFRB-201ENST00000261799 ZFAND6Q6FIF0 208 aa10.4□□□□□ -0.74
PDGFRB-201ENST00000261799 NDUFB1O75438 58 aa10.4□□□□□ -0.74
PDGFRB-201ENST00000261799 ATRAIDQ6UW56 229 aa10.4□□□□□ -0.74
PDGFRB-201ENST00000261799 MED14OSP0DP75 135 aa10.4□□□□□ -0.75
PDGFRB-201ENST00000261799 ZNF726P1Q15940 193 aa10.4□□□□□ -0.75
PDGFRB-201ENST00000261799 IGF1P05019 195 aa10.39□□□□□ -0.75
PDGFRB-201ENST00000261799 A0A0J9YX75 114 aa10.39□□□□□ -0.75
PDGFRB-201ENST00000261799 DEFB114Q30KQ6 69 aa10.39□□□□□ -0.75
PDGFRB-201ENST00000261799 NCKAP5O14513 1909 aa10.39□□□□□ -0.75
PDGFRB-201ENST00000261799 SPAG11BQ08648 103 aa10.39□□□□□ -0.75
PDGFRB-201ENST00000261799 HIST3H2BBQ8N257 126 aa10.39□□□□□ -0.75
PDGFRB-201ENST00000261799 KIR2DL5BQ8NHK3 375 aa10.39□□□□□ -0.75
PDGFRB-201ENST00000261799 NOTCH4Q99466 2003 aa10.38□□□□□ -0.75
PDGFRB-201ENST00000261799 FUSP35637 526 aaKnown RBP eCLIP10.38□□□□□ -0.75
PDGFRB-201ENST00000261799 C9JAW5 83 aa10.38□□□□□ -0.75
PDGFRB-201ENST00000261799 FAM222AQ5U5X8 452 aa10.38□□□□□ -0.75
PDGFRB-201ENST00000261799 F8VRH5 84 aa10.38□□□□□ -0.75
PDGFRB-201ENST00000261799 IGKV1-17P01599 117 aa10.38□□□□□ -0.75
PDGFRB-201ENST00000261799 C18orf32Q8TCD1 76 aa10.38□□□□□ -0.75
PDGFRB-201ENST00000261799 PROP1O75360 226 aa10.38□□□□□ -0.75
PDGFRB-201ENST00000261799 ZNF664Q8N3J9 261 aa10.38□□□□□ -0.75
PDGFRB-201ENST00000261799 C11orf52Q96A22 123 aa10.38□□□□□ -0.75
PDGFRB-201ENST00000261799 DOCK8Q8NF50 2099 aa10.38□□□□□ -0.75
PDGFRB-201ENST00000261799 GAGE12HA6NDE8 117 aa10.38□□□□□ -0.75
PDGFRB-201ENST00000261799 H3BQ85 93 aa10.38□□□□□ -0.75
PDGFRB-201ENST00000261799 UNQ9165/PRO28630Q6UXU0 137 aa10.38□□□□□ -0.75
PDGFRB-201ENST00000261799 SNRNP200O75643 2136 aaKnown RBP10.37□□□□□ -0.75
PDGFRB-201ENST00000261799 LINC01548A6NM66 108 aa10.37□□□□□ -0.75
PDGFRB-201ENST00000261799 ARID1AO14497 2285 aa10.37□□□□□ -0.75
PDGFRB-201ENST00000261799 PRSS47A8MTI9 375 aa10.37□□□□□ -0.75
PDGFRB-201ENST00000261799 MSMPQ1L6U9 139 aa10.37□□□□□ -0.75
PDGFRB-201ENST00000261799 ODF3L1Q8IXM7 274 aa10.37□□□□□ -0.75
PDGFRB-201ENST00000261799 COL4A3Q01955 1670 aa10.37□□□□□ -0.75
PDGFRB-201ENST00000261799 NDUFA7O95182 113 aa10.36□□□□□ -0.75
PDGFRB-201ENST00000261799 KIR3DS1Q14943 382 aa10.36□□□□□ -0.75
PDGFRB-201ENST00000261799 PSMG3-AS1Q96PY0 264 aa10.36□□□□□ -0.75
PDGFRB-201ENST00000261799 LRCOL1A6NCL2 159 aa10.36□□□□□ -0.75
PDGFRB-201ENST00000261799 P0DMU3 169 aa10.36□□□□□ -0.75
PDGFRB-201ENST00000261799 FAM231AP0DMU4 169 aa10.36□□□□□ -0.75
PDGFRB-201ENST00000261799 FAM231CP0DMU5 169 aa10.36□□□□□ -0.75
PDGFRB-201ENST00000261799 FGF6P10767 208 aa10.36□□□□□ -0.75
PDGFRB-201ENST00000261799 LRRK1Q38SD2 2015 aa10.36□□□□□ -0.75
PDGFRB-201ENST00000261799 NCR3O14931 201 aa10.36□□□□□ -0.75
PDGFRB-201ENST00000261799 HAMPP81172 84 aa10.36□□□□□ -0.75
PDGFRB-201ENST00000261799 LGALS9BQ3B8N2 356 aa10.36□□□□□ -0.75
PDGFRB-201ENST00000261799 LGALS9CQ6DKI2 356 aa10.36□□□□□ -0.75
PDGFRB-201ENST00000261799 LINC00482Q8N8I6 264 aa10.36□□□□□ -0.75
PDGFRB-201ENST00000261799 ORMDL1Q9P0S3 153 aa10.36□□□□□ -0.75
PDGFRB-201ENST00000261799 IGKV2-24A0A0C4DH68 120 aa10.35□□□□□ -0.75
PDGFRB-201ENST00000261799 C9JQL5 133 aa10.35□□□□□ -0.75
PDGFRB-201ENST00000261799 MRPL35Q9NZE8 188 aaKnown RBP10.35□□□□□ -0.75
PDGFRB-201ENST00000261799 UBE2D1P51668 147 aa10.35□□□□□ -0.75
PDGFRB-201ENST00000261799 LINC01006Q8NI28 216 aa10.35□□□□□ -0.75
PDGFRB-201ENST00000261799 ZFP2Q6ZN57 461 aa10.35□□□□□ -0.75
PDGFRB-201ENST00000261799 ZNF702PQ9H963 129 aa10.35□□□□□ -0.75
PDGFRB-201ENST00000261799 NUPR2A6NF83 97 aa10.35□□□□□ -0.75
PDGFRB-201ENST00000261799 UTF1Q5T230 341 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms