RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 TIRAPP58753 221 aa4.87□□□□□ -1.63
BRIP1-201ENST00000259008 BUB3O43684 328 aa4.87□□□□□ -1.63
BRIP1-201ENST00000259008 FABP2P12104 132 aa4.87□□□□□ -1.63
BRIP1-201ENST00000259008 PRSS46E5RG02 174 aa4.87□□□□□ -1.63
BRIP1-201ENST00000259008 TYMSP04818 313 aa4.87□□□□□ -1.63
BRIP1-201ENST00000259008 IGF1P05019 195 aa4.87□□□□□ -1.63
BRIP1-201ENST00000259008 GAGE2BQ13066 116 aa4.87□□□□□ -1.63
BRIP1-201ENST00000259008 DEFB114Q30KQ6 69 aa4.87□□□□□ -1.63
BRIP1-201ENST00000259008 Q8N1Y9 231 aa4.87□□□□□ -1.63
BRIP1-201ENST00000259008 ADAMTS20P59510 1910 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 A0A1W2PPR1 153 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 PSMG3-AS1Q96PY0 264 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 LRCOL1A6NCL2 159 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 LINC00587B1AMM8 73 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 CRYGCP07315 174 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 MUC3AQ02505 3323 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 PTPN13Q12923 2485 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 PRAC2D3DTV9 90 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 LEPROTO15243 131 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 FAM222AQ5U5X8 452 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 ZNF493Q6ZR52 646 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 TM2D2Q9BX73 214 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 RNF152Q8N8N0 203 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 FANCD2OSQ96PS1 177 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 LAMTOR3Q9UHA4 124 aa4.86□□□□□ -1.63
BRIP1-201ENST00000259008 SPINK8P0C7L1 97 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 ZNF48Q96MX3 618 aaPredicted RBP4.85□□□□□ -1.63
BRIP1-201ENST00000259008 USP34Q70CQ2 3546 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 PRRC2AP48634 2157 aaKnown RBP4.85□□□□□ -1.63
BRIP1-201ENST00000259008 MYMXA0A1B0GTQ4 84 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 CHCHD1Q96BP2 118 aaKnown RBP4.85□□□□□ -1.63
BRIP1-201ENST00000259008 CAMK2N2Q96S95 79 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 TMEM126AQ9H061 195 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 A0A087WWC5 75 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 IGKV1-17P01599 117 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 SH2D6Q7Z4S9 175 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 PLEKHB2Q96CS7 222 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 ZNF503Q96F45 646 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 KLK12Q9UKR0 248 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 A0A0J9YWU9 116 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 WI2-2373I1.2A0A1W2PRP0 233 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 NCOR2Q9Y618 2525 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 RAI1Q7Z5J4 1906 aaPredicted RBP4.85□□□□□ -1.63
BRIP1-201ENST00000259008 EGR2P11161 476 aaPredicted RBP4.85□□□□□ -1.63
BRIP1-201ENST00000259008 C5orf38Q86SI9 138 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 ORAOV1Q8WV07 137 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 GTSF1Q8WW33 167 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 RETNQ9HD89 108 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 EML5Q05BV3 1969 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 KIAA1549Q9HCM3 1950 aa4.85□□□□□ -1.63
BRIP1-201ENST00000259008 C10orf142B7Z368 130 aa4.84□□□□□ -1.63
BRIP1-201ENST00000259008 ZNF726P1Q15940 193 aa4.84□□□□□ -1.63
BRIP1-201ENST00000259008 GFRA4Q9GZZ7 299 aa4.84□□□□□ -1.63
BRIP1-201ENST00000259008 UQCR10Q9UDW1 63 aa4.84□□□□□ -1.63
BRIP1-201ENST00000259008 TRAV1-1A0A0B4J248 108 aa4.84□□□□□ -1.63
BRIP1-201ENST00000259008 RBAKDNA6NC62 111 aa4.84□□□□□ -1.63
BRIP1-201ENST00000259008 MORN5Q5VZ52 161 aa4.84□□□□□ -1.63
BRIP1-201ENST00000259008 CHAC1Q9BUX1 264 aa4.84□□□□□ -1.63
BRIP1-201ENST00000259008 KLF12Q9Y4X4 402 aa4.84□□□□□ -1.63
BRIP1-201ENST00000259008 LINC01549A6NIU2 74 aa4.84□□□□□ -1.63
BRIP1-201ENST00000259008 GHRHP01286 108 aa4.84□□□□□ -1.63
BRIP1-201ENST00000259008 MRPL51Q4U2R6 128 aaKnown RBP4.84□□□□□ -1.63
BRIP1-201ENST00000259008 C2orf66Q6UXQ4 117 aa4.84□□□□□ -1.63
BRIP1-201ENST00000259008 TMEM263Q8WUH6 116 aaKnown RBP4.84□□□□□ -1.63
BRIP1-201ENST00000259008 VSIG2Q96IQ7 327 aa4.84□□□□□ -1.63
BRIP1-201ENST00000259008 DOPEY2Q9Y3R5 2298 aa4.84□□□□□ -1.64
BRIP1-201ENST00000259008 IFITM2Q01629 132 aa4.84□□□□□ -1.64
BRIP1-201ENST00000259008 Q6ZSR3 168 aa4.84□□□□□ -1.64
BRIP1-201ENST00000259008 CBY1Q9Y3M2 126 aa4.84□□□□□ -1.64
BRIP1-201ENST00000259008 FREM1Q5H8C1 2179 aa4.84□□□□□ -1.64
BRIP1-201ENST00000259008 TMEM238C9JI98 176 aa4.84□□□□□ -1.64
BRIP1-201ENST00000259008 NANOS2P60321 138 aaKnown RBP4.84□□□□□ -1.64
BRIP1-201ENST00000259008 C1orf229Q6ZS94 237 aaPredicted RBP4.84□□□□□ -1.64
BRIP1-201ENST00000259008 CRYGDP07320 174 aa4.83□□□□□ -1.64
BRIP1-201ENST00000259008 CARHSP1Q9Y2V2 147 aaKnown RBP4.83□□□□□ -1.64
BRIP1-201ENST00000259008 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.83□□□□□ -1.64
BRIP1-201ENST00000259008 IGHV4-4A0A075B6R2 117 aa4.83□□□□□ -1.64
BRIP1-201ENST00000259008 IGLV2-14P01704 120 aa4.83□□□□□ -1.64
BRIP1-201ENST00000259008 SUMO4Q6EEV6 95 aa4.83□□□□□ -1.64
BRIP1-201ENST00000259008 DEFB105AQ8NG35 78 aa4.83□□□□□ -1.64
BRIP1-201ENST00000259008 TMEM170AQ8WVE7 144 aa4.83□□□□□ -1.64
BRIP1-201ENST00000259008 MRPL36Q9P0J6 103 aaKnown RBP4.83□□□□□ -1.64
BRIP1-201ENST00000259008 LY96Q9Y6Y9 160 aa4.83□□□□□ -1.64
BRIP1-201ENST00000259008 IGKV2-24A0A0C4DH68 120 aa4.83□□□□□ -1.64
BRIP1-201ENST00000259008 LGALS9O00182 355 aa4.83□□□□□ -1.64
BRIP1-201ENST00000259008 NDUFA7O95182 113 aa4.83□□□□□ -1.64
BRIP1-201ENST00000259008 PCNX3Q9H6A9 2034 aa4.83□□□□□ -1.64
BRIP1-201ENST00000259008 IGHV4-28A0A0C4DH34 117 aa4.83□□□□□ -1.64
BRIP1-201ENST00000259008 PKIGQ9Y2B9 76 aa4.83□□□□□ -1.64
BRIP1-201ENST00000259008 PLA2G2EQ9NZK7 142 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 TP53TG3Q9ULZ0 132 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 LTAP01374 205 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 PSMB8P28062 276 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 PRR20EP86478 221 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 PRR20CP86479 221 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 PRR20DP86480 221 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 PRR20BP86481 221 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 PRR20AP86496 221 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 FAM104BQ5XKR9 115 aa4.82□□□□□ -1.64
BRIP1-201ENST00000259008 TMEM141Q96I45 108 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms