RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 PRR20AP86496 221 aa5.21□□□□□ -1.58
PDGFRA-201ENST00000257290 RPL39P5Q59GN2 51 aa5.21□□□□□ -1.58
PDGFRA-201ENST00000257290 CCL17Q92583 94 aa5.21□□□□□ -1.58
PDGFRA-201ENST00000257290 C1orf147Q96MC9 270 aaPredicted RBP5.21□□□□□ -1.58
PDGFRA-201ENST00000257290 PRR15Q8IV56 129 aa5.21□□□□□ -1.58
PDGFRA-201ENST00000257290 PRR15LQ9BU68 103 aa5.21□□□□□ -1.58
PDGFRA-201ENST00000257290 A0A087WVE0 104 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 IGKV1D-43A0A0B4J1Z2 117 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 APELAP0DMC3 54 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 I3L3M4 83 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 PRR25Q96S07 402 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 MPDZO75970 2070 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 SDHAF1A6NFY7 115 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 IGF1P05019 195 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 SUMO4Q6EEV6 95 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 FAM19A3Q7Z5A8 133 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 Q8N6K4 173 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 FAM223BA6NKX1 122 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 PLA2G2CQ5R387 149 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 PIK3CD-AS1Q5SR53 167 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 IGHV3-30P01768 117 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 IGHV3-30-5P0DP03 117 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 RNASE13Q5GAN3 156 aaKnown RBP5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 SVILO95425 2214 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 IGKV1-39P01597 117 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 IGKV1D-39P04432 117 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 Q0VFX4 171 aa5.2□□□□□ -1.58
PDGFRA-201ENST00000257290 CABIN1Q9Y6J0 2220 aa5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 H3BQ85 93 aa5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 NDUFB1O75438 58 aa5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 IGKV2-40A0A087WW87 121 aaPredicted RBP5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 BCE1O60756 84 aa5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 IGKV2D-40P01614 121 aaPredicted RBP5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 IGKV3D-15A0A087WSY6 115 aa5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 PINLYPA6NC86 204 aa5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 PMS2P5A8MQ11 134 aa5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 CRIP2P52943 208 aaPredicted RBP5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 EBI3Q14213 229 aa5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 KLF14Q8TD94 323 aaPredicted RBP5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 RBM12B-AS1Q9P1G2 102 aa5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 IGKV1-12A0A0C4DH73 117 aa5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 IGKV1D-12P01611 117 aa5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 SPINK2P20155 84 aa5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 C14orf178Q8N769 122 aaPredicted RBP5.19□□□□□ -1.58
PDGFRA-201ENST00000257290 C17orf100A8MU93 164 aa5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 LINC00269Q8N2A0 174 aa5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 ITLN1Q8WWA0 313 aa5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 TMEM14CQ9P0S9 112 aa5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 PRYO14603 147 aa5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 ZNF106Q9H2Y7 1883 aaKnown RBP5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 EFNA2O43921 213 aa5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 Q6ZVQ6 151 aa5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 GGNQ86UU5 652 aa5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 LEAP2Q969E1 77 aa5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 RMI2Q96E14 147 aa5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 SRRM4A7MD48 611 aaKnown RBP5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 GRNP28799 593 aaKnown RBP5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 LINC00482Q8N8I6 264 aa5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 MDS2Q8NDY4 140 aa5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 TMEM263Q8WUH6 116 aaKnown RBP5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 TCF20Q9UGU0 1960 aaKnown RBP5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 IGLV2-8P01709 118 aa5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 C9orf139Q6ZV77 190 aa5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 ZNF706Q9Y5V0 76 aaPredicted RBP5.18□□□□□ -1.58
PDGFRA-201ENST00000257290 LRCOL1A6NCL2 159 aa5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 MIAQ16674 131 aa5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 F5P12259 2224 aa5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 LECT2O14960 151 aa5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 IGHV1-8P0DP01 117 aa5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 GNLYP22749 145 aa5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 IGHV1-2P23083 117 aa5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 NEXN-AS1Q8NBZ9 246 aa5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 C17orf77Q96MU5 243 aa5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 Q9HAA7 133 aa5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 MRPL36Q9P0J6 103 aaKnown RBP5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 SPRR3Q9UBC9 169 aa5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 TNFRSF13BO14836 293 aaPredicted RBP5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 C8orf49Q96NF6 230 aa5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 LIMD2Q9BT23 127 aa5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 FHL3Q13643 280 aa5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 KIAA2026Q5HYC2 2103 aa5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 ZNF837Q96EG3 531 aaPredicted RBP5.17□□□□□ -1.58
PDGFRA-201ENST00000257290 IGKV3-15P01624 115 aa5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 C9orf106Q8NAJ2 232 aa5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 URB1-AS1Q96HZ7 61 aa5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 PRO3102Q9H379 93 aa5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 C19orf71A6NCJ1 209 aa5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 B3GALT5-AS1P59052 145 aa5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 C7orf65Q6ZTY9 151 aa5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 NRACQ8N912 160 aa5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 CDSNQ15517 529 aa5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 NREPQ16612 68 aa5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 ATG2BQ96BY7 2078 aa5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 WI2-2373I1.2A0A1W2PRP0 233 aa5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 Q5XG85 94 aa5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 FOXL2NBQ6ZUU3 175 aa5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 ZCCHC24Q8N2G6 241 aaKnown RBP5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 Q8TAT8 98 aa5.16□□□□□ -1.58
PDGFRA-201ENST00000257290 A0A087WZ39 114 aa5.15□□□□□ -1.58
PDGFRA-201ENST00000257290 HTN1P15515 57 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms