RNA–Protein interactions for RNA: ENST00000257181.9

PRPF38A-201, Transcript of pre-mRNA processing factor 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38A, Length 5,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-201ENST00000257181 STPG4Q8N801 248 aa10.23□□□□□ -0.77
PRPF38A-201ENST00000257181 C11orf68Q9H3H3 251 aaKnown RBP10.23□□□□□ -0.77
PRPF38A-201ENST00000257181 ZGRF1Q86YA3 2104 aa10.23□□□□□ -0.77
PRPF38A-201ENST00000257181 PIK3CD-AS1Q5SR53 167 aa10.22□□□□□ -0.77
PRPF38A-201ENST00000257181 RITA1Q96K30 269 aa10.22□□□□□ -0.77
PRPF38A-201ENST00000257181 ADAMTS20P59510 1910 aa10.22□□□□□ -0.77
PRPF38A-201ENST00000257181 C7orf33Q8WU49 177 aa10.22□□□□□ -0.77
PRPF38A-201ENST00000257181 SNHG12Q9BXW3 62 aa10.22□□□□□ -0.77
PRPF38A-201ENST00000257181 GFI1BQ5VTD9 330 aa10.21□□□□□ -0.77
PRPF38A-201ENST00000257181 U3KQK5 164 aa10.21□□□□□ -0.77
PRPF38A-201ENST00000257181 PRSS47A8MTI9 375 aa10.21□□□□□ -0.77
PRPF38A-201ENST00000257181 Q9HAA7 133 aa10.21□□□□□ -0.77
PRPF38A-201ENST00000257181 MRPL51Q4U2R6 128 aaKnown RBP10.2□□□□□ -0.78
PRPF38A-201ENST00000257181 C9JQL5 133 aa10.2□□□□□ -0.78
PRPF38A-201ENST00000257181 K7ERU9 68 aa10.2□□□□□ -0.78
PRPF38A-201ENST00000257181 AMTNQ6UX39 209 aa10.2□□□□□ -0.78
PRPF38A-201ENST00000257181 GTSF1LQ9H1H1 148 aa10.2□□□□□ -0.78
PRPF38A-201ENST00000257181 GVINP1Q7Z2Y8 2422 aa10.19□□□□□ -0.78
PRPF38A-201ENST00000257181 CLUHP3Q96NS8 147 aa10.19□□□□□ -0.78
PRPF38A-201ENST00000257181 HEATR5AQ86XA9 2040 aa10.19□□□□□ -0.78
PRPF38A-201ENST00000257181 HLA-DMBP28068 263 aa10.19□□□□□ -0.78
PRPF38A-201ENST00000257181 MRGPRG-AS1Q2M3A8 158 aa10.19□□□□□ -0.78
PRPF38A-201ENST00000257181 INAFM2P0DMQ5 153 aa10.19□□□□□ -0.78
PRPF38A-201ENST00000257181 PRO1933Q9H354 126 aa10.19□□□□□ -0.78
PRPF38A-201ENST00000257181 LAMTOR3Q9UHA4 124 aa10.19□□□□□ -0.78
PRPF38A-201ENST00000257181 GTF3C1Q12789 2109 aa10.18□□□□□ -0.78
PRPF38A-201ENST00000257181 TMEM213A2RRL7 107 aa10.18□□□□□ -0.78
PRPF38A-201ENST00000257181 F6UB75 175 aa10.18□□□□□ -0.78
PRPF38A-201ENST00000257181 Q6ZVH6 145 aa10.18□□□□□ -0.78
PRPF38A-201ENST00000257181 RTTNQ86VV8 2226 aa10.18□□□□□ -0.78
PRPF38A-201ENST00000257181 TRBV6-4A0A1B0GX49 114 aa10.18□□□□□ -0.78
PRPF38A-201ENST00000257181 ORAOV1Q8WV07 137 aa10.18□□□□□ -0.78
PRPF38A-201ENST00000257181 BBC3Q96PG8 261 aaPredicted RBP10.18□□□□□ -0.78
PRPF38A-201ENST00000257181 LINC00474Q9P2X8 69 aa10.18□□□□□ -0.78
PRPF38A-201ENST00000257181 CEP250Q9BV73 2442 aa10.18□□□□□ -0.78
PRPF38A-201ENST00000257181 TRAV8-4A0A0B4J246 113 aa10.18□□□□□ -0.78
PRPF38A-201ENST00000257181 ETDCA0A1B0GVM5 59 aa10.18□□□□□ -0.78
PRPF38A-201ENST00000257181 IGLC2P0DOY2 106 aa10.18□□□□□ -0.78
PRPF38A-201ENST00000257181 GATD1Q8NB37 220 aa10.18□□□□□ -0.78
PRPF38A-201ENST00000257181 CHCHD7Q9BUK0 85 aa10.18□□□□□ -0.78
PRPF38A-201ENST00000257181 C22orf34Q6ZV56 151 aa10.17□□□□□ -0.78
PRPF38A-201ENST00000257181 Q8N1Y9 231 aa10.17□□□□□ -0.78
PRPF38A-201ENST00000257181 GNRH2O43555 120 aa10.17□□□□□ -0.78
PRPF38A-201ENST00000257181 IGHV3-30P01768 117 aa10.17□□□□□ -0.78
PRPF38A-201ENST00000257181 IGHV3-33P01772 117 aa10.17□□□□□ -0.78
PRPF38A-201ENST00000257181 IGHV3-30-3P0DP02 117 aa10.17□□□□□ -0.78
PRPF38A-201ENST00000257181 IGHV3-30-5P0DP03 117 aa10.17□□□□□ -0.78
PRPF38A-201ENST00000257181 RPL18AQ02543 176 aaKnown RBP10.16□□□□□ -0.78
PRPF38A-201ENST00000257181 Q6ZQT7 251 aa10.16□□□□□ -0.78
PRPF38A-201ENST00000257181 CD300CQ08708 224 aa10.16□□□□□ -0.78
PRPF38A-201ENST00000257181 FAM222AQ5U5X8 452 aa10.16□□□□□ -0.78
PRPF38A-201ENST00000257181 SPTBN2O15020 2390 aa10.16□□□□□ -0.78
PRPF38A-201ENST00000257181 IFITM1P13164 125 aa10.16□□□□□ -0.78
PRPF38A-201ENST00000257181 CITED1Q99966 193 aa10.16□□□□□ -0.78
PRPF38A-201ENST00000257181 B9D2Q9BPU9 175 aa10.16□□□□□ -0.78
PRPF38A-201ENST00000257181 KRTAP10-9P60411 292 aa10.15□□□□□ -0.78
PRPF38A-201ENST00000257181 SUMO4Q6EEV6 95 aa10.15□□□□□ -0.78
PRPF38A-201ENST00000257181 CRYGDP07320 174 aa10.15□□□□□ -0.78
PRPF38A-201ENST00000257181 P0C879 139 aa10.15□□□□□ -0.78
PRPF38A-201ENST00000257181 TAL2Q16559 108 aa10.15□□□□□ -0.78
PRPF38A-201ENST00000257181 HIVEP2P31629 2446 aa10.15□□□□□ -0.78
PRPF38A-201ENST00000257181 YLPM1P49750 1951 aaKnown RBP10.15□□□□□ -0.78
PRPF38A-201ENST00000257181 A0A1B0GWB2 263 aa10.15□□□□□ -0.78
PRPF38A-201ENST00000257181 ESDP10768 282 aa10.15□□□□□ -0.78
PRPF38A-201ENST00000257181 PHF3Q92576 2039 aaKnown RBP10.15□□□□□ -0.78
PRPF38A-201ENST00000257181 A0A096LPF7 62 aa10.15□□□□□ -0.79
PRPF38A-201ENST00000257181 EGR2P11161 476 aaPredicted RBP10.15□□□□□ -0.79
PRPF38A-201ENST00000257181 SPANXDQ9BXN6 97 aa10.15□□□□□ -0.79
PRPF38A-201ENST00000257181 V9GYV3 84 aa10.15□□□□□ -0.79
PRPF38A-201ENST00000257181 UNQ9165/PRO28630Q6UXU0 137 aa10.14□□□□□ -0.79
PRPF38A-201ENST00000257181 IGHV3-38A0A0C4DH36 116 aa10.14□□□□□ -0.79
PRPF38A-201ENST00000257181 SIVA1O15304 175 aa10.14□□□□□ -0.79
PRPF38A-201ENST00000257181 CRYBA4P53673 196 aa10.14□□□□□ -0.79
PRPF38A-201ENST00000257181 USF3Q68DE3 2245 aa10.14□□□□□ -0.79
PRPF38A-201ENST00000257181 RPL32P62910 135 aaKnown RBP10.14□□□□□ -0.79
PRPF38A-201ENST00000257181 Q8N2B8 174 aa10.14□□□□□ -0.79
PRPF38A-201ENST00000257181 ZNF318Q5VUA4 2279 aa10.14□□□□□ -0.79
PRPF38A-201ENST00000257181 CACNA1GO43497 2377 aa10.14□□□□□ -0.79
PRPF38A-201ENST00000257181 LGALS9CQ6DKI2 356 aa10.14□□□□□ -0.79
PRPF38A-201ENST00000257181 NDUFA12Q9UI09 145 aa10.14□□□□□ -0.79
PRPF38A-201ENST00000257181 UBE2AP49459 152 aa10.13□□□□□ -0.79
PRPF38A-201ENST00000257181 MTURNQ8N3F0 131 aa10.13□□□□□ -0.79
PRPF38A-201ENST00000257181 XCL1P47992 114 aa10.13□□□□□ -0.79
PRPF38A-201ENST00000257181 FAM19A2Q8N3H0 131 aa10.13□□□□□ -0.79
PRPF38A-201ENST00000257181 hDV102S1A0JD36 115 aa10.13□□□□□ -0.79
PRPF38A-201ENST00000257181 F8VRH5 84 aa10.13□□□□□ -0.79
PRPF38A-201ENST00000257181 SYS1-DBNDD2H3BUS1 97 aa10.13□□□□□ -0.79
PRPF38A-201ENST00000257181 K7EP13 123 aa10.13□□□□□ -0.79
PRPF38A-201ENST00000257181 LINC00322Q6ZN03 302 aaPredicted RBP10.13□□□□□ -0.79
PRPF38A-201ENST00000257181 MUC7Q8TAX7 377 aa10.13□□□□□ -0.79
PRPF38A-201ENST00000257181 NPSP0C0P6 89 aa10.13□□□□□ -0.79
PRPF38A-201ENST00000257181 VSIG2Q96IQ7 327 aa10.13□□□□□ -0.79
PRPF38A-201ENST00000257181 DYSFO75923 2080 aa10.12□□□□□ -0.79
PRPF38A-201ENST00000257181 CTRLP40313 264 aa10.12□□□□□ -0.79
PRPF38A-201ENST00000257181 BVES-AS1Q5T3Y7 98 aa10.12□□□□□ -0.79
PRPF38A-201ENST00000257181 MRPL52Q86TS9 123 aaKnown RBP10.12□□□□□ -0.79
PRPF38A-201ENST00000257181 IGHV1-58A0A0C4DH39 117 aa10.12□□□□□ -0.79
PRPF38A-201ENST00000257181 F8WDY8 70 aa10.12□□□□□ -0.79
PRPF38A-201ENST00000257181 MIAQ16674 131 aa10.12□□□□□ -0.79
PRPF38A-201ENST00000257181 PATE2Q6UY27 113 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms