RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 SYS1-DBNDD2H3BUS1 97 aa14.04□□□□□ -0.16
TRIM47-201ENST00000254816 LOC389332A0A1B0GUA5 103 aa14.04□□□□□ -0.16
TRIM47-201ENST00000254816 NDUFA11Q86Y39 141 aa14.04□□□□□ -0.16
TRIM47-201ENST00000254816 TRAV21A0A0B4J279 112 aa14.03□□□□□ -0.16
TRIM47-201ENST00000254816 TCAPO15273 167 aa14.03□□□□□ -0.16
TRIM47-201ENST00000254816 IGLL1P15814 213 aa14.03□□□□□ -0.16
TRIM47-201ENST00000254816 TWIST1Q15672 202 aa14.03□□□□□ -0.16
TRIM47-201ENST00000254816 APRG1Q8IVJ8 170 aa14.03□□□□□ -0.16
TRIM47-201ENST00000254816 OR4C46A6NHA9 309 aa14.03□□□□□ -0.16
TRIM47-201ENST00000254816 SAP30O75446 220 aa14.03□□□□□ -0.16
TRIM47-201ENST00000254816 FAM104BQ5XKR9 115 aa14.03□□□□□ -0.16
TRIM47-201ENST00000254816 FOXI2Q6ZQN5 318 aa14.03□□□□□ -0.16
TRIM47-201ENST00000254816 PRSS3P2Q8NHM4 247 aa14.03□□□□□ -0.16
TRIM47-201ENST00000254816 AP5S1Q9NUS5 200 aa14.03□□□□□ -0.16
TRIM47-201ENST00000254816 TRAV12-2A0A075B6T6 113 aa14.02□□□□□ -0.16
TRIM47-201ENST00000254816 KLLNB2CW77 178 aa14.02□□□□□ -0.16
TRIM47-201ENST00000254816 SMKR1H3BMG3 65 aa14.02□□□□□ -0.16
TRIM47-201ENST00000254816 IFI27P40305 119 aaPredicted RBP14.02□□□□□ -0.16
TRIM47-201ENST00000254816 HNRNPA3P51991 378 aaKnown RBP14.02□□□□□ -0.16
TRIM47-201ENST00000254816 MAP6D1Q9H9H5 199 aa14.02□□□□□ -0.16
TRIM47-201ENST00000254816 ZNF256Q9Y2P7 627 aaPredicted RBP14.02□□□□□ -0.16
TRIM47-201ENST00000254816 TRAV2A0A0B4J234 112 aa14.02□□□□□ -0.17
TRIM47-201ENST00000254816 TRBV7-9A0A0J9YWB2 115 aa14.02□□□□□ -0.17
TRIM47-201ENST00000254816 CRXO43186 299 aaPredicted RBP14.02□□□□□ -0.17
TRIM47-201ENST00000254816 MRPL51Q4U2R6 128 aaKnown RBP14.02□□□□□ -0.17
TRIM47-201ENST00000254816 FA2HQ7L5A8 372 aa14.02□□□□□ -0.17
TRIM47-201ENST00000254816 MRPL52Q86TS9 123 aaKnown RBP14.02□□□□□ -0.17
TRIM47-201ENST00000254816 MSRB1Q9NZV6 116 aa14.02□□□□□ -0.17
TRIM47-201ENST00000254816 TP73-AS1Q9UF72 201 aa14.02□□□□□ -0.17
TRIM47-201ENST00000254816 OR5AL1P0C617 328 aa14.01□□□□□ -0.17
TRIM47-201ENST00000254816 G0S2P27469 103 aa14.01□□□□□ -0.17
TRIM47-201ENST00000254816 SPINK13Q1W4C9 94 aa14.01□□□□□ -0.17
TRIM47-201ENST00000254816 ANXA2RQ3ZCQ2 193 aa14.01□□□□□ -0.17
TRIM47-201ENST00000254816 PRELID3AQ96N28 172 aa14.01□□□□□ -0.17
TRIM47-201ENST00000254816 SPAG8Q99932 426 aaPredicted RBP14.01□□□□□ -0.17
TRIM47-201ENST00000254816 SIGLEC8Q9NYZ4 499 aa14.01□□□□□ -0.17
TRIM47-201ENST00000254816 PMCHL2Q9BQD1 86 aa14.01□□□□□ -0.17
TRIM47-201ENST00000254816 TRAV12-3A0A0B4J271 114 aa14□□□□□ -0.17
TRIM47-201ENST00000254816 hDV102S1A0JD36 115 aa14□□□□□ -0.17
TRIM47-201ENST00000254816 NCR2O95944 276 aa14□□□□□ -0.17
TRIM47-201ENST00000254816 FXYD7P58549 80 aa14□□□□□ -0.17
TRIM47-201ENST00000254816 MAP1LC3CQ9BXW4 147 aa14□□□□□ -0.17
TRIM47-201ENST00000254816 TENM1Q9UKZ4 2725 aa14□□□□□ -0.17
TRIM47-201ENST00000254816 DUSP14O95147 198 aaKnown RBP13.99□□□□□ -0.17
TRIM47-201ENST00000254816 U3KQK5 164 aa13.99□□□□□ -0.17
TRIM47-201ENST00000254816 PF4P02776 101 aa13.99□□□□□ -0.17
TRIM47-201ENST00000254816 LEPP41159 167 aa13.99□□□□□ -0.17
TRIM47-201ENST00000254816 ORMDL3Q8N138 153 aa13.99□□□□□ -0.17
TRIM47-201ENST00000254816 JMJD1CQ15652 2540 aa13.99□□□□□ -0.17
TRIM47-201ENST00000254816 TRAV25A0A0B4J276 109 aa13.98□□□□□ -0.17
TRIM47-201ENST00000254816 H3BVH4 76 aa13.98□□□□□ -0.17
TRIM47-201ENST00000254816 GNRH2O43555 120 aa13.98□□□□□ -0.17
TRIM47-201ENST00000254816 SPRY2O43597 315 aa13.98□□□□□ -0.17
TRIM47-201ENST00000254816 TSPOP30536 169 aa13.98□□□□□ -0.17
TRIM47-201ENST00000254816 AMTNQ6UX39 209 aa13.98□□□□□ -0.17
TRIM47-201ENST00000254816 ODF3Q96PU9 254 aa13.98□□□□□ -0.17
TRIM47-201ENST00000254816 HSPB8Q9UJY1 196 aa13.98□□□□□ -0.17
TRIM47-201ENST00000254816 C20orf202A1L168 122 aa13.98□□□□□ -0.17
TRIM47-201ENST00000254816 C7orf71A4D174 169 aa13.97□□□□□ -0.17
TRIM47-201ENST00000254816 HLA-DRB4P13762 266 aa13.97□□□□□ -0.17
TRIM47-201ENST00000254816 CDKN1BP46527 198 aa13.97□□□□□ -0.17
TRIM47-201ENST00000254816 ODF3L2Q3SX64 289 aa13.97□□□□□ -0.17
TRIM47-201ENST00000254816 OR10AG1Q8NH19 301 aa13.97□□□□□ -0.17
TRIM47-201ENST00000254816 HLA-DRB4X5D2U9 266 aa13.97□□□□□ -0.17
TRIM47-201ENST00000254816 RBMY1BA6NDE4 496 aaKnown RBP13.97□□□□□ -0.17
TRIM47-201ENST00000254816 RBMY1EA6NEQ0 496 aaKnown RBP13.97□□□□□ -0.17
TRIM47-201ENST00000254816 H3BMM0 161 aa13.97□□□□□ -0.17
TRIM47-201ENST00000254816 NPYP01303 97 aa13.97□□□□□ -0.17
TRIM47-201ENST00000254816 RBMY1DP0C7P1 496 aaKnown RBP13.97□□□□□ -0.17
TRIM47-201ENST00000254816 CKS2P33552 79 aa13.97□□□□□ -0.17
TRIM47-201ENST00000254816 LAMTOR2Q9Y2Q5 125 aa13.97□□□□□ -0.17
TRIM47-201ENST00000254816 A0A096LNJ9 63 aa13.96□□□□□ -0.17
TRIM47-201ENST00000254816 TMEM191AQ9H0A3 160 aa13.96□□□□□ -0.17
TRIM47-201ENST00000254816 GAS8-AS1O95177 125 aa13.95□□□□□ -0.18
TRIM47-201ENST00000254816 DMRTA1Q5VZB9 504 aa13.95□□□□□ -0.18
TRIM47-201ENST00000254816 ZNF747Q9BV97 191 aa13.95□□□□□ -0.18
TRIM47-201ENST00000254816 TEP1Q99973 2627 aaKnown RBP13.95□□□□□ -0.18
TRIM47-201ENST00000254816 IGLV1-51P01701 117 aa13.95□□□□□ -0.18
TRIM47-201ENST00000254816 ZNF25P17030 456 aaPredicted RBP13.95□□□□□ -0.18
TRIM47-201ENST00000254816 PET117Q6UWS5 81 aa13.95□□□□□ -0.18
TRIM47-201ENST00000254816 STPG4Q8N801 248 aa13.95□□□□□ -0.18
TRIM47-201ENST00000254816 LINC00482Q8N8I6 264 aa13.95□□□□□ -0.18
TRIM47-201ENST00000254816 SPATA3Q8NHX4 192 aa13.95□□□□□ -0.18
TRIM47-201ENST00000254816 CNFNQ9BYD5 112 aa13.95□□□□□ -0.18
TRIM47-201ENST00000254816 S100A4P26447 101 aaKnown RBP13.94□□□□□ -0.18
TRIM47-201ENST00000254816 HINT1P49773 126 aaPredicted RBP13.94□□□□□ -0.18
TRIM47-201ENST00000254816 FAM159AQ6UWV7 190 aa13.94□□□□□ -0.18
TRIM47-201ENST00000254816 RNF185Q96GF1 192 aa13.94□□□□□ -0.18
TRIM47-201ENST00000254816 SNAI2O43623 268 aa13.93□□□□□ -0.18
TRIM47-201ENST00000254816 ASIPP42127 132 aa13.93□□□□□ -0.18
TRIM47-201ENST00000254816 COL5A1-AS1Q5SY13 56 aa13.93□□□□□ -0.18
TRIM47-201ENST00000254816 ATRQ13535 2644 aa13.92□□□□□ -0.18
TRIM47-201ENST00000254816 MUC4Q99102 2169 aa13.92□□□□□ -0.18
TRIM47-201ENST00000254816 LINC01545Q5VT33 79 aa13.92□□□□□ -0.18
TRIM47-201ENST00000254816 CITED1Q99966 193 aa13.92□□□□□ -0.18
TRIM47-201ENST00000254816 VWFP04275 2813 aa13.92□□□□□ -0.18
TRIM47-201ENST00000254816 A8MTW9 85 aa13.92□□□□□ -0.18
TRIM47-201ENST00000254816 RBMY1A1P0DJD3 496 aaKnown RBP13.92□□□□□ -0.18
TRIM47-201ENST00000254816 RBMY1CP0DJD4 496 aa13.92□□□□□ -0.18
TRIM47-201ENST00000254816 RNASE3P12724 160 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms