RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 PLA2G2AP14555 144 aa11.1□□□□□ -0.63
MBD4-201ENST00000249910 CKS2P33552 79 aa11.1□□□□□ -0.63
MBD4-201ENST00000249910 OR8A1Q8NGG7 326 aa11.1□□□□□ -0.63
MBD4-201ENST00000249910 CHCHD1Q96BP2 118 aaKnown RBP11.1□□□□□ -0.63
MBD4-201ENST00000249910 DUX3Q96PT4 197 aa11.1□□□□□ -0.63
MBD4-201ENST00000249910 AP5S1Q9NUS5 200 aa11.1□□□□□ -0.63
MBD4-201ENST00000249910 TNFRSF18Q9Y5U5 241 aa11.1□□□□□ -0.63
MBD4-201ENST00000249910 NOTCH3Q9UM47 2321 aa11.1□□□□□ -0.63
MBD4-201ENST00000249910 ORMDL3Q8N138 153 aa11.1□□□□□ -0.63
MBD4-201ENST00000249910 DCANP1Q8TF63 244 aa11.1□□□□□ -0.63
MBD4-201ENST00000249910 TRBV7-9A0A0J9YWB2 115 aa11.09□□□□□ -0.63
MBD4-201ENST00000249910 GATA1P15976 413 aaPredicted RBP11.09□□□□□ -0.63
MBD4-201ENST00000249910 RNASE4P34096 147 aaKnown RBP11.09□□□□□ -0.63
MBD4-201ENST00000249910 OR11H12B2RN74 326 aa11.09□□□□□ -0.63
MBD4-201ENST00000249910 H3BVH4 76 aa11.09□□□□□ -0.63
MBD4-201ENST00000249910 NPYP01303 97 aa11.09□□□□□ -0.63
MBD4-201ENST00000249910 ZNF688P0C7X2 276 aa11.09□□□□□ -0.63
MBD4-201ENST00000249910 HOXD3P31249 432 aaPredicted RBP11.09□□□□□ -0.63
MBD4-201ENST00000249910 OR11H1Q8NG94 326 aa11.09□□□□□ -0.63
MBD4-201ENST00000249910 OR11H2Q8NH07 326 aa11.09□□□□□ -0.63
MBD4-201ENST00000249910 RNF185Q96GF1 192 aa11.09□□□□□ -0.63
MBD4-201ENST00000249910 LINC00477Q96M19 166 aa11.09□□□□□ -0.63
MBD4-201ENST00000249910 CNFNQ9BYD5 112 aa11.09□□□□□ -0.63
MBD4-201ENST00000249910 SIGLEC8Q9NYZ4 499 aa11.09□□□□□ -0.63
MBD4-201ENST00000249910 K7EMT4 169 aa11.08□□□□□ -0.64
MBD4-201ENST00000249910 IGKV3-20P01619 116 aa11.08□□□□□ -0.64
MBD4-201ENST00000249910 SMIM17P0DL12 118 aa11.08□□□□□ -0.64
MBD4-201ENST00000249910 SRSF2Q01130 221 aaKnown RBP11.08□□□□□ -0.64
MBD4-201ENST00000249910 MS4A6AQ9H2W1 248 aa11.08□□□□□ -0.64
MBD4-201ENST00000249910 J3QKU1 62 aa11.08□□□□□ -0.64
MBD4-201ENST00000249910 OVOL1O14753 267 aa11.08□□□□□ -0.64
MBD4-201ENST00000249910 NEGR1Q7Z3B1 354 aa11.08□□□□□ -0.64
MBD4-201ENST00000249910 TMEM191AQ9H0A3 160 aa11.08□□□□□ -0.64
MBD4-201ENST00000249910 GEMIN7Q9H840 131 aaKnown RBP11.08□□□□□ -0.64
MBD4-201ENST00000249910 UFC1Q9Y3C8 167 aa11.08□□□□□ -0.64
MBD4-201ENST00000249910 ANK3Q12955 4377 aaKnown RBP11.07□□□□□ -0.64
MBD4-201ENST00000249910 ELANEP08246 267 aa11.07□□□□□ -0.64
MBD4-201ENST00000249910 LGALS1P09382 135 aaKnown RBP11.07□□□□□ -0.64
MBD4-201ENST00000249910 KHDC1LQ5JSQ8 128 aa11.07□□□□□ -0.64
MBD4-201ENST00000249910 FA2HQ7L5A8 372 aa11.07□□□□□ -0.64
MBD4-201ENST00000249910 MRAP2Q96G30 205 aa11.07□□□□□ -0.64
MBD4-201ENST00000249910 PMCHL2Q9BQD1 86 aa11.07□□□□□ -0.64
MBD4-201ENST00000249910 TMEM70Q9BUB7 260 aa11.07□□□□□ -0.64
MBD4-201ENST00000249910 TRAV26-2A0A0B4J265 109 aa11.07□□□□□ -0.64
MBD4-201ENST00000249910 DEFB125Q8N687 156 aa11.07□□□□□ -0.64
MBD4-201ENST00000249910 UBE2E2Q96LR5 201 aa11.07□□□□□ -0.64
MBD4-201ENST00000249910 U3KQK5 164 aa11.07□□□□□ -0.64
MBD4-201ENST00000249910 SLURP1P55000 103 aa11.06□□□□□ -0.64
MBD4-201ENST00000249910 PSMG4Q5JS54 123 aa11.06□□□□□ -0.64
MBD4-201ENST00000249910 SPANXN1Q5VSR9 72 aa11.06□□□□□ -0.64
MBD4-201ENST00000249910 C11orf44Q8N8P7 122 aa11.06□□□□□ -0.64
MBD4-201ENST00000249910 GNRH2O43555 120 aa11.06□□□□□ -0.64
MBD4-201ENST00000249910 ANXA2RQ3ZCQ2 193 aa11.06□□□□□ -0.64
MBD4-201ENST00000249910 MYOZ3Q8TDC0 251 aa11.06□□□□□ -0.64
MBD4-201ENST00000249910 A0A096LNJ9 63 aa11.05□□□□□ -0.64
MBD4-201ENST00000249910 SYS1-DBNDD2H3BUS1 97 aa11.05□□□□□ -0.64
MBD4-201ENST00000249910 M0R381 172 aa11.05□□□□□ -0.64
MBD4-201ENST00000249910 TMEM89A2RUT3 159 aa11.04□□□□□ -0.64
MBD4-201ENST00000249910 SS18L2Q9UHA2 77 aa11.04□□□□□ -0.64
MBD4-201ENST00000249910 LENEPQ9Y5L5 61 aa11.04□□□□□ -0.64
MBD4-201ENST00000249910 OR5AL1P0C617 328 aa11.04□□□□□ -0.64
MBD4-201ENST00000249910 HIVEP2P31629 2446 aa11.04□□□□□ -0.64
MBD4-201ENST00000249910 JMJD1CQ15652 2540 aa11.04□□□□□ -0.64
MBD4-201ENST00000249910 TRAV21A0A0B4J279 112 aa11.03□□□□□ -0.64
MBD4-201ENST00000249910 S100A4P26447 101 aaKnown RBP11.03□□□□□ -0.64
MBD4-201ENST00000249910 UFSP1Q6NVU6 142 aa11.03□□□□□ -0.64
MBD4-201ENST00000249910 FAM19A4Q96LR4 140 aa11.03□□□□□ -0.64
MBD4-201ENST00000249910 TRAV12-2A0A075B6T6 113 aa11.03□□□□□ -0.64
MBD4-201ENST00000249910 GAGE10A6NGK3 116 aa11.03□□□□□ -0.64
MBD4-201ENST00000249910 ADAMTSL5Q6ZMM2 481 aa11.03□□□□□ -0.64
MBD4-201ENST00000249910 CITED1Q99966 193 aa11.03□□□□□ -0.64
MBD4-201ENST00000249910 TP73-AS1Q9UF72 201 aa11.03□□□□□ -0.64
MBD4-201ENST00000249910 TRAV8-6A0A0B4J262 113 aa11.02□□□□□ -0.64
MBD4-201ENST00000249910 OR4C46A6NHA9 309 aa11.02□□□□□ -0.64
MBD4-201ENST00000249910 ID1P41134 155 aa11.02□□□□□ -0.64
MBD4-201ENST00000249910 ESM1Q9NQ30 184 aa11.02□□□□□ -0.64
MBD4-201ENST00000249910 OTOGQ6ZRI0 2925 aa11.02□□□□□ -0.64
MBD4-201ENST00000249910 CRXO43186 299 aaPredicted RBP11.02□□□□□ -0.65
MBD4-201ENST00000249910 HSD52Q0P140 79 aa11.02□□□□□ -0.65
MBD4-201ENST00000249910 GTF2H5Q6ZYL4 71 aa11.02□□□□□ -0.65
MBD4-201ENST00000249910 TRAV12-3A0A0B4J271 114 aa11.01□□□□□ -0.65
MBD4-201ENST00000249910 TNFRSF6BO95407 300 aa11.01□□□□□ -0.65
MBD4-201ENST00000249910 IGLL1P15814 213 aa11.01□□□□□ -0.65
MBD4-201ENST00000249910 BOD1L2Q8IYS8 172 aa11.01□□□□□ -0.65
MBD4-201ENST00000249910 ZNF747Q9BV97 191 aa11.01□□□□□ -0.65
MBD4-201ENST00000249910 MAP1LC3CQ9BXW4 147 aa11.01□□□□□ -0.65
MBD4-201ENST00000249910 SETXQ7Z333 2677 aaKnown RBP11.01□□□□□ -0.65
MBD4-201ENST00000249910 Q6ZSV7 163 aa11.01□□□□□ -0.65
MBD4-201ENST00000249910 Q8N2B8 174 aa11.01□□□□□ -0.65
MBD4-201ENST00000249910 RNF152Q8N8N0 203 aa11.01□□□□□ -0.65
MBD4-201ENST00000249910 hDV102S1A0JD36 115 aa11□□□□□ -0.65
MBD4-201ENST00000249910 DNAJC9-AS1A6NH13 148 aa11□□□□□ -0.65
MBD4-201ENST00000249910 SNAI2O43623 268 aa11□□□□□ -0.65
MBD4-201ENST00000249910 CD5LO43866 347 aa11□□□□□ -0.65
MBD4-201ENST00000249910 MPV17L2Q567V2 206 aa11□□□□□ -0.65
MBD4-201ENST00000249910 SNRPD3P62318 126 aaKnown RBP11□□□□□ -0.65
MBD4-201ENST00000249910 CD300EQ496F6 205 aaPredicted RBP11□□□□□ -0.65
MBD4-201ENST00000249910 HSPB8Q9UJY1 196 aa11□□□□□ -0.65
MBD4-201ENST00000249910 PHLDA3Q9Y5J5 127 aa11□□□□□ -0.65
MBD4-201ENST00000249910 MUC4Q99102 2169 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms