RNA–Protein interactions for RNA: ENST00000248420.9

CACTIN-202, Transcript of cactin, spliceosome C complex subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CACTIN, Length 2,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACTIN-202ENST00000248420 SPG11Q96JI7 2443 aa15.23■□□□□ 0.03
CACTIN-202ENST00000248420 LOC107984156A0A0G2JMH3 177 aa15.22■□□□□ 0.03
CACTIN-202ENST00000248420 DUSP14O95147 198 aaKnown RBP15.22■□□□□ 0.03
CACTIN-202ENST00000248420 IGHV3-11P01762 117 aa15.22■□□□□ 0.03
CACTIN-202ENST00000248420 ORMDL2Q53FV1 153 aa15.22■□□□□ 0.03
CACTIN-202ENST00000248420 ZFP2Q6ZN57 461 aa15.22■□□□□ 0.03
CACTIN-202ENST00000248420 C1orf122Q6ZSJ8 110 aa15.22■□□□□ 0.03
CACTIN-202ENST00000248420 GPHB5Q86YW7 130 aa15.22■□□□□ 0.03
CACTIN-202ENST00000248420 ARL17AQ8IVW1 177 aa15.22■□□□□ 0.03
CACTIN-202ENST00000248420 JPT2Q9H910 190 aa15.22■□□□□ 0.03
CACTIN-202ENST00000248420 RNF223E7ERA6 249 aa15.22■□□□□ 0.03
CACTIN-202ENST00000248420 APOMO95445 188 aa15.22■□□□□ 0.03
CACTIN-202ENST00000248420 SRSF9Q13242 221 aaKnown RBP eCLIP15.22■□□□□ 0.03
CACTIN-202ENST00000248420 TRAV12-1A0A0B4J245 112 aa15.21■□□□□ 0.03
CACTIN-202ENST00000248420 CENPVL3A0A0U1RRI6 287 aa15.21■□□□□ 0.03
CACTIN-202ENST00000248420 TGFAP01135 160 aa15.21■□□□□ 0.03
CACTIN-202ENST00000248420 ARL3P36405 182 aa15.21■□□□□ 0.03
CACTIN-202ENST00000248420 PTH2Q96A98 100 aa15.21■□□□□ 0.03
CACTIN-202ENST00000248420 MUC4Q99102 2169 aa15.21■□□□□ 0.02
CACTIN-202ENST00000248420 UBE2E1P51965 193 aa15.2■□□□□ 0.02
CACTIN-202ENST00000248420 NCOR2Q9Y618 2525 aa15.2■□□□□ 0.02
CACTIN-202ENST00000248420 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.2■□□□□ 0.022e-8■■■■■ 31.6
CACTIN-202ENST00000248420 CHD8Q9HCK8 2581 aa15.2■□□□□ 0.02
CACTIN-202ENST00000248420 TRBV7-1A0A0A6YYK4 115 aa15.2■□□□□ 0.02
CACTIN-202ENST00000248420 ZNF418Q8TF45 676 aaPredicted RBP15.2■□□□□ 0.02
CACTIN-202ENST00000248420 DPH3P1Q9H4G8 78 aa15.2■□□□□ 0.02
CACTIN-202ENST00000248420 U3KQE9 123 aa15.2■□□□□ 0.02
CACTIN-202ENST00000248420 CSMD2Q7Z408 3487 aa15.2■□□□□ 0.02
CACTIN-202ENST00000248420 J3QR89 54 aa15.2■□□□□ 0.02
CACTIN-202ENST00000248420 K7ENP7 123 aa15.2■□□□□ 0.02
CACTIN-202ENST00000248420 PSMB2P49721 201 aa15.2■□□□□ 0.02
CACTIN-202ENST00000248420 ASIPP42127 132 aa15.19■□□□□ 0.02
CACTIN-202ENST00000248420 ITLN2Q8WWU7 325 aaPredicted RBP15.19■□□□□ 0.02
CACTIN-202ENST00000248420 SORL1Q92673 2214 aa15.19■□□□□ 0.02
CACTIN-202ENST00000248420 RPL39P62891 51 aaKnown RBP15.19■□□□□ 0.02
CACTIN-202ENST00000248420 FBXL19-AS1Q494R0 122 aa15.19■□□□□ 0.02
CACTIN-202ENST00000248420 OR10J6PQ8NGY7 276 aa15.19■□□□□ 0.02
CACTIN-202ENST00000248420 SPOCK3Q9BQ16 436 aa15.19■□□□□ 0.02
CACTIN-202ENST00000248420 NDUFS8O00217 210 aa15.18■□□□□ 0.02
CACTIN-202ENST00000248420 BRD3OSQ6XYD6 125 aa15.18■□□□□ 0.02
CACTIN-202ENST00000248420 C5orf56Q8N8D9 126 aa15.18■□□□□ 0.02
CACTIN-202ENST00000248420 CRYGDP07320 174 aa15.18■□□□□ 0.02
CACTIN-202ENST00000248420 SMCPP49901 116 aaPredicted RBP15.18■□□□□ 0.02
CACTIN-202ENST00000248420 BPESC1Q9GZL8 116 aa15.18■□□□□ 0.02
CACTIN-202ENST00000248420 TRAV21A0A0B4J279 112 aa15.17■□□□□ 0.02
CACTIN-202ENST00000248420 MRPL53Q96EL3 112 aaKnown RBP15.17■□□□□ 0.02
CACTIN-202ENST00000248420 UBTD1Q9HAC8 227 aa15.17■□□□□ 0.02
CACTIN-202ENST00000248420 A0A087WWL8 130 aa15.17■□□□□ 0.02
CACTIN-202ENST00000248420 TRAV41A0A0B4J266 112 aa15.17■□□□□ 0.02
CACTIN-202ENST00000248420 EDN2P20800 178 aa15.17■□□□□ 0.02
CACTIN-202ENST00000248420 C11orf86A6NJI1 115 aa15.16■□□□□ 0.02
CACTIN-202ENST00000248420 CIDEAO60543 219 aa15.16■□□□□ 0.02
CACTIN-202ENST00000248420 RNASE3P12724 160 aaKnown RBP15.16■□□□□ 0.02
CACTIN-202ENST00000248420 TSHBP01222 138 aa15.16■□□□□ 0.02
CACTIN-202ENST00000248420 C9orf139Q6ZV77 190 aa15.16■□□□□ 0.02
CACTIN-202ENST00000248420 NFE4Q86UQ8 179 aa15.16■□□□□ 0.02
CACTIN-202ENST00000248420 TP53TG1Q9Y2A0 90 aa15.16■□□□□ 0.02
CACTIN-202ENST00000248420 Q6ZS46 218 aa15.15■□□□□ 0.02
CACTIN-202ENST00000248420 SPATA25Q9BR10 227 aa15.15■□□□□ 0.02
CACTIN-202ENST00000248420 NPFFO15130 113 aa15.15■□□□□ 0.02
CACTIN-202ENST00000248420 TSPAN13O95857 204 aa15.15■□□□□ 0.02
CACTIN-202ENST00000248420 LY6EQ16553 131 aa15.15■□□□□ 0.02
CACTIN-202ENST00000248420 LINC00477Q96M19 166 aa15.14■□□□□ 0.01
CACTIN-202ENST00000248420 SYT8Q8NBV8 401 aa15.14■□□□□ 0.01
CACTIN-202ENST00000248420 COX6B1P14854 86 aa15.13■□□□□ 0.01
CACTIN-202ENST00000248420 CREBBPQ92793 2442 aa15.13■□□□□ 0.01
CACTIN-202ENST00000248420 F5H697 171 aa15.13■□□□□ 0.01
CACTIN-202ENST00000248420 SPTBN4Q9H254 2564 aa15.13■□□□□ 0.01
CACTIN-202ENST00000248420 ABCA2Q9BZC7 2435 aa15.12■□□□□ 0.01
CACTIN-202ENST00000248420 TSPEAR-AS2P59090 65 aa15.12■□□□□ 0.01
CACTIN-202ENST00000248420 CSPG4Q6UVK1 2322 aa15.12■□□□□ 0.01
CACTIN-202ENST00000248420 FOXI1Q12951 378 aa15.12■□□□□ 0.01
CACTIN-202ENST00000248420 CFAP126Q5VTH2 177 aa15.12■□□□□ 0.01
CACTIN-202ENST00000248420 IGLV4-69A0A075B6H9 119 aa15.11■□□□□ 0.01
CACTIN-202ENST00000248420 TMEM170BQ5T4T1 132 aa15.11■□□□□ 0.01
CACTIN-202ENST00000248420 OPRPNQ99935 248 aaPredicted RBP15.11■□□□□ 0.01
CACTIN-202ENST00000248420 LMO4P61968 165 aa15.11■□□□□ 0.01
CACTIN-202ENST00000248420 FHL3Q13643 280 aa15.11■□□□□ 0.01
CACTIN-202ENST00000248420 FAM74A4Q5TZK3 123 aa15.11■□□□□ 0.01
CACTIN-202ENST00000248420 DLX4Q92988 240 aaPredicted RBP15.11■□□□□ 0.01
CACTIN-202ENST00000248420 SOCS3O14543 225 aa15.1■□□□□ 0.01
CACTIN-202ENST00000248420 ATP6V0BQ99437 205 aa15.1■□□□□ 0.01
CACTIN-202ENST00000248420 DOPEY2Q9Y3R5 2298 aa15.09■□□□□ 0.01
CACTIN-202ENST00000248420 IGKV3-20P01619 116 aa15.09■□□□□ 0.01
CACTIN-202ENST00000248420 UBE2D1P51668 147 aa15.09■□□□□ 0.01
CACTIN-202ENST00000248420 KLK9Q2XQG4 91 aa15.09■□□□□ 0.01
CACTIN-202ENST00000248420 KLK9Q9UKQ9 250 aa15.09■□□□□ 0.01
CACTIN-202ENST00000248420 IGHV3-64A0A075B6Q5 118 aa15.09■□□□□ 0.01
CACTIN-202ENST00000248420 CD7P09564 240 aa15.09■□□□□ 0.01
CACTIN-202ENST00000248420 LINC00315P59091 139 aa15.09■□□□□ 0.01
CACTIN-202ENST00000248420 Q5PR19 223 aa15.09■□□□□ 0.01
CACTIN-202ENST00000248420 ZNF256Q9Y2P7 627 aaPredicted RBP15.09■□□□□ 0.01
CACTIN-202ENST00000248420 LENEPQ9Y5L5 61 aa15.09■□□□□ 0.01
CACTIN-202ENST00000248420 A0A0J9YY99 117 aa15.08■□□□□ 0
CACTIN-202ENST00000248420 OVOL1O14753 267 aa15.08■□□□□ 0
CACTIN-202ENST00000248420 C1QTNF4Q9BXJ3 329 aa15.08■□□□□ 0
CACTIN-202ENST00000248420 TMEM238LA0A1B0GVL6 79 aa15.08■□□□□ 0
CACTIN-202ENST00000248420 A6NJY4 79 aa15.08■□□□□ 0
CACTIN-202ENST00000248420 LINC01619G3V211 115 aa15.08■□□□□ 0
CACTIN-202ENST00000248420 SUMO4Q6EEV6 95 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms