RNA–Protein interactions for RNA: ENST00000218364.4

HTATSF1-201, Transcript of HIV-1 Tat specific factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTATSF1, Length 2,775 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-201ENST00000218364 PRADC1Q9BSG0 188 aa16.7■□□□□ 0.26
HTATSF1-201ENST00000218364 PRO0461Q9UI25 63 aa16.7■□□□□ 0.26
HTATSF1-201ENST00000218364 RNASE4P34096 147 aaKnown RBP16.7■□□□□ 0.26
HTATSF1-201ENST00000218364 DEFB1P60022 68 aa16.7■□□□□ 0.26
HTATSF1-201ENST00000218364 CYSLTR1Q9Y271 337 aa16.69■□□□□ 0.26
HTATSF1-201ENST00000218364 GNRH2O43555 120 aa16.69■□□□□ 0.26
HTATSF1-201ENST00000218364 RPL32P62910 135 aaKnown RBP16.69■□□□□ 0.26
HTATSF1-201ENST00000218364 MORN3Q6PF18 240 aaPredicted RBP16.69■□□□□ 0.26
HTATSF1-201ENST00000218364 J3QR89 54 aa16.68■□□□□ 0.26
HTATSF1-201ENST00000218364 HOXA3O43365 443 aaPredicted RBP16.68■□□□□ 0.26
HTATSF1-201ENST00000218364 COX6B1P14854 86 aa16.68■□□□□ 0.26
HTATSF1-201ENST00000218364 GAGE13Q4V321 117 aa16.68■□□□□ 0.26
HTATSF1-201ENST00000218364 KIF25-AS1Q9Y6Z4 181 aa16.68■□□□□ 0.26
HTATSF1-201ENST00000218364 H3BUA1 57 aa16.67■□□□□ 0.26
HTATSF1-201ENST00000218364 AMTNQ6UX39 209 aa16.67■□□□□ 0.26
HTATSF1-201ENST00000218364 USMG5Q96IX5 58 aa16.67■□□□□ 0.26
HTATSF1-201ENST00000218364 IGHV4OR15-8A0A075B7B6 117 aa16.67■□□□□ 0.26
HTATSF1-201ENST00000218364 A0A087WW49 117 aa16.67■□□□□ 0.26
HTATSF1-201ENST00000218364 IGHV1-69DA0A0B4J2H0 117 aa16.67■□□□□ 0.26
HTATSF1-201ENST00000218364 LINC00315P59091 139 aa16.67■□□□□ 0.26
HTATSF1-201ENST00000218364 CD300EQ496F6 205 aaPredicted RBP16.67■□□□□ 0.26
HTATSF1-201ENST00000218364 USP24Q9UPU5 2620 aa16.66■□□□□ 0.26
HTATSF1-201ENST00000218364 IGHV1-69P01742 117 aa16.66■□□□□ 0.26
HTATSF1-201ENST00000218364 CRYGDP07320 174 aa16.66■□□□□ 0.26
HTATSF1-201ENST00000218364 SAMD13Q5VXD3 122 aa16.66■□□□□ 0.26
HTATSF1-201ENST00000218364 LINC01549A6NIU2 74 aa16.66■□□□□ 0.26
HTATSF1-201ENST00000218364 F6UB75 175 aa16.66■□□□□ 0.26
HTATSF1-201ENST00000218364 SCGB1A1P11684 91 aa16.66■□□□□ 0.26
HTATSF1-201ENST00000218364 AGRNO00468 2067 aa16.65■□□□□ 0.26
HTATSF1-201ENST00000218364 ZNF815PA8K554 130 aa16.65■□□□□ 0.26
HTATSF1-201ENST00000218364 RELNP78509 3460 aa16.65■□□□□ 0.26
HTATSF1-201ENST00000218364 ETDBQ3ZM63 59 aa16.65■□□□□ 0.26
HTATSF1-201ENST00000218364 SH2D6Q7Z4S9 175 aa16.65■□□□□ 0.26
HTATSF1-201ENST00000218364 SIGMAR1Q99720 223 aa16.65■□□□□ 0.26
HTATSF1-201ENST00000218364 IGHV3OR16-10A0A075B7F0 116 aa16.64■□□□□ 0.25
HTATSF1-201ENST00000218364 SPAG8Q99932 426 aaPredicted RBP16.64■□□□□ 0.25
HTATSF1-201ENST00000218364 TSSC4Q9Y5U2 329 aaPredicted RBP16.64■□□□□ 0.25
HTATSF1-201ENST00000218364 GAGE12HA6NDE8 117 aa16.64■□□□□ 0.25
HTATSF1-201ENST00000218364 DUSP14O95147 198 aaKnown RBP16.64■□□□□ 0.25
HTATSF1-201ENST00000218364 SCGB2A2Q13296 93 aa16.63■□□□□ 0.25
HTATSF1-201ENST00000218364 SPATA25Q9BR10 227 aa16.63■□□□□ 0.25
HTATSF1-201ENST00000218364 TMEM238LA0A1B0GVL6 79 aa16.63■□□□□ 0.25
HTATSF1-201ENST00000218364 A6NJY4 79 aa16.63■□□□□ 0.25
HTATSF1-201ENST00000218364 TSHBP01222 138 aa16.63■□□□□ 0.25
HTATSF1-201ENST00000218364 UBE2D1P51668 147 aa16.63■□□□□ 0.25
HTATSF1-201ENST00000218364 IGLV4-69A0A075B6H9 119 aa16.62■□□□□ 0.25
HTATSF1-201ENST00000218364 IGIPA6NJ69 53 aa16.62■□□□□ 0.25
HTATSF1-201ENST00000218364 KLLNB2CW77 178 aa16.62■□□□□ 0.25
HTATSF1-201ENST00000218364 IGHG2P01859 326 aa16.62■□□□□ 0.25
HTATSF1-201ENST00000218364 AZU1P20160 251 aa16.62■□□□□ 0.25
HTATSF1-201ENST00000218364 POLR2KP53803 58 aaKnown RBP16.62■□□□□ 0.25
HTATSF1-201ENST00000218364 RPL11P62913 178 aaKnown RBP16.62■□□□□ 0.25
HTATSF1-201ENST00000218364 PAPPA-AS1Q5QFB9 102 aa16.62■□□□□ 0.25
HTATSF1-201ENST00000218364 PLEKHB2Q96CS7 222 aa16.62■□□□□ 0.25
HTATSF1-201ENST00000218364 CACNA1BQ00975 2339 aa16.62■□□□□ 0.25
HTATSF1-201ENST00000218364 RHPN1-AS1Q9BWJ2 59 aa16.62■□□□□ 0.25
HTATSF1-201ENST00000218364 PGPEP1Q9NXJ5 209 aa16.62■□□□□ 0.25
HTATSF1-201ENST00000218364 BRD3OSQ6XYD6 125 aa16.61■□□□□ 0.25
HTATSF1-201ENST00000218364 IGHV3-11P01762 117 aa16.6■□□□□ 0.25
HTATSF1-201ENST00000218364 SCGB1D4Q6XE38 83 aa16.6■□□□□ 0.25
HTATSF1-201ENST00000218364 C11orf86A6NJI1 115 aa16.6■□□□□ 0.25
HTATSF1-201ENST00000218364 ZFP2Q6ZN57 461 aa16.6■□□□□ 0.25
HTATSF1-201ENST00000218364 GTSF1LQ9H1H1 148 aa16.6■□□□□ 0.25
HTATSF1-201ENST00000218364 MED13LQ71F56 2210 aa16.6■□□□□ 0.25
HTATSF1-201ENST00000218364 TP53TG1Q9Y2A0 90 aa16.6■□□□□ 0.25
HTATSF1-201ENST00000218364 TMEM141Q96I45 108 aa16.59■□□□□ 0.25
HTATSF1-201ENST00000218364 PMVKQ15126 192 aa16.59■□□□□ 0.25
HTATSF1-201ENST00000218364 MRPL16Q9NX20 251 aaKnown RBP16.59■□□□□ 0.25
HTATSF1-201ENST00000218364 COL6A6A6NMZ7 2263 aa16.58■□□□□ 0.25
HTATSF1-201ENST00000218364 VCYO14598 125 aa16.58■□□□□ 0.24
HTATSF1-201ENST00000218364 CD7P09564 240 aa16.58■□□□□ 0.24
HTATSF1-201ENST00000218364 HERVK_113P61574 105 aa16.58■□□□□ 0.24
HTATSF1-201ENST00000218364 SRSF9Q13242 221 aaKnown RBP eCLIP16.58■□□□□ 0.24
HTATSF1-201ENST00000218364 SUMO4Q6EEV6 95 aa16.58■□□□□ 0.24
HTATSF1-201ENST00000218364 KLHL30-AS1Q8NEE0 82 aa16.58■□□□□ 0.24
HTATSF1-201ENST00000218364 TIMM17AQ99595 171 aa16.58■□□□□ 0.24
HTATSF1-201ENST00000218364 IGHV4-39P01824 125 aa16.57■□□□□ 0.24
HTATSF1-201ENST00000218364 MTURNQ8N3F0 131 aa16.57■□□□□ 0.24
HTATSF1-201ENST00000218364 DAZ1Q9NQZ3 744 aaKnown RBP16.57■□□□□ 0.24
HTATSF1-201ENST00000218364 IGKV3-7A0A075B6H7 116 aa16.57■□□□□ 0.24
HTATSF1-201ENST00000218364 A6NDX4 124 aa16.57■□□□□ 0.24
HTATSF1-201ENST00000218364 PF4V1P10720 104 aa16.57■□□□□ 0.24
HTATSF1-201ENST00000218364 FAM159AQ6UWV7 190 aa16.57■□□□□ 0.24
HTATSF1-201ENST00000218364 A0A0J9YY99 117 aa16.56■□□□□ 0.24
HTATSF1-201ENST00000218364 LCNL1Q6ZST4 164 aa16.56■□□□□ 0.24
HTATSF1-201ENST00000218364 DLX4Q92988 240 aaPredicted RBP16.56■□□□□ 0.24
HTATSF1-201ENST00000218364 IGSF10Q6WRI0 2623 aa16.56■□□□□ 0.24
HTATSF1-201ENST00000218364 IGLV1-40P01703 118 aa16.56■□□□□ 0.24
HTATSF1-201ENST00000218364 CFAP126Q5VTH2 177 aa16.56■□□□□ 0.24
HTATSF1-201ENST00000218364 TSPAN13O95857 204 aa16.55■□□□□ 0.24
HTATSF1-201ENST00000218364 LY6EQ16553 131 aa16.55■□□□□ 0.24
HTATSF1-201ENST00000218364 JPT2Q9H910 190 aa16.55■□□□□ 0.24
HTATSF1-201ENST00000218364 ATP6V0E2Q8NHE4 81 aa16.55■□□□□ 0.24
HTATSF1-201ENST00000218364 KIR2DL4Q99706 377 aa16.55■□□□□ 0.24
HTATSF1-201ENST00000218364 TRBV6-5A0A0K0K1A5 114 aa16.55■□□□□ 0.24
HTATSF1-201ENST00000218364 K7EMT4 169 aa16.54■□□□□ 0.24
HTATSF1-201ENST00000218364 UBE2D3P61077 147 aa16.54■□□□□ 0.24
HTATSF1-201ENST00000218364 UBE2D2P62837 147 aa16.54■□□□□ 0.24
HTATSF1-201ENST00000218364 SMAGPQ0VAQ4 97 aa16.54■□□□□ 0.24
HTATSF1-201ENST00000218364 MUC4Q99102 2169 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms