RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 DEFB130BP0DP73 79 aa19.43■□□□□ 0.7
CHMP4B-201ENST00000217402 DEFB130AP0DP74 79 aa19.43■□□□□ 0.7
CHMP4B-201ENST00000217402 GAGE12BA1L429 117 aa19.43■□□□□ 0.7
CHMP4B-201ENST00000217402 M0R2P5 195 aa19.43■□□□□ 0.7
CHMP4B-201ENST00000217402 GAGE7O76087 117 aa19.43■□□□□ 0.7
CHMP4B-201ENST00000217402 MT-ND4LP03901 98 aa19.43■□□□□ 0.7
CHMP4B-201ENST00000217402 IGLC6P0CF74 106 aa19.43■□□□□ 0.7
CHMP4B-201ENST00000217402 GAGE12FP0CL80 117 aa19.43■□□□□ 0.7
CHMP4B-201ENST00000217402 GAGE12GP0CL81 117 aa19.43■□□□□ 0.7
CHMP4B-201ENST00000217402 GAGE12IP0CL82 117 aa19.43■□□□□ 0.7
CHMP4B-201ENST00000217402 GTSF1Q8WW33 167 aa19.43■□□□□ 0.7
CHMP4B-201ENST00000217402 PHLDA3Q9Y5J5 127 aa19.43■□□□□ 0.7
CHMP4B-201ENST00000217402 MED14OSP0DP75 135 aa19.42■□□□□ 0.7
CHMP4B-201ENST00000217402 C11orf45Q8TAV5 145 aa19.42■□□□□ 0.7
CHMP4B-201ENST00000217402 TSKUQ8WUA8 353 aa19.42■□□□□ 0.7
CHMP4B-201ENST00000217402 SCRT2Q9NQ03 307 aa19.42■□□□□ 0.7
CHMP4B-201ENST00000217402 TEX48A0A1B0GUV7 120 aa19.41■□□□□ 0.7
CHMP4B-201ENST00000217402 SSTP61278 116 aa19.41■□□□□ 0.7
CHMP4B-201ENST00000217402 OR10AG1Q8NH19 301 aa19.41■□□□□ 0.7
CHMP4B-201ENST00000217402 PPP1R2P9O14990 202 aa19.4■□□□□ 0.7
CHMP4B-201ENST00000217402 SNAI2O43623 268 aa19.4■□□□□ 0.7
CHMP4B-201ENST00000217402 ZNF876PQ49A33 203 aa19.4■□□□□ 0.7
CHMP4B-201ENST00000217402 CLRN3Q8NCR9 226 aa19.4■□□□□ 0.7
CHMP4B-201ENST00000217402 SSBP4Q9BWG4 385 aaPredicted RBP19.4■□□□□ 0.7
CHMP4B-201ENST00000217402 A0A1W2PPQ1 181 aa19.4■□□□□ 0.7
CHMP4B-201ENST00000217402 M0R381 172 aa19.4■□□□□ 0.7
CHMP4B-201ENST00000217402 OR5AL1P0C617 328 aa19.4■□□□□ 0.7
CHMP4B-201ENST00000217402 NANOS2P60321 138 aaKnown RBP19.4■□□□□ 0.7
CHMP4B-201ENST00000217402 DAD1P61803 113 aa19.4■□□□□ 0.7
CHMP4B-201ENST00000217402 LGALS9BQ3B8N2 356 aa19.4■□□□□ 0.7
CHMP4B-201ENST00000217402 LYZL1Q6UWQ5 148 aa19.4■□□□□ 0.7
CHMP4B-201ENST00000217402 ANAPC16Q96DE5 110 aa19.4■□□□□ 0.7
CHMP4B-201ENST00000217402 SVBPQ8N300 66 aa19.39■□□□□ 0.69
CHMP4B-201ENST00000217402 MUC4Q99102 2169 aa19.38■□□□□ 0.69
CHMP4B-201ENST00000217402 TRGV2A0A075B6R0 118 aa19.37■□□□□ 0.69
CHMP4B-201ENST00000217402 HIGD1CA8MV81 97 aa19.37■□□□□ 0.69
CHMP4B-201ENST00000217402 C12orf74Q32Q52 190 aa19.37■□□□□ 0.69
CHMP4B-201ENST00000217402 SPANXN1Q5VSR9 72 aa19.37■□□□□ 0.69
CHMP4B-201ENST00000217402 DMRTA1Q5VZB9 504 aa19.37■□□□□ 0.69
CHMP4B-201ENST00000217402 LINC00612Q8N6U2 182 aa19.37■□□□□ 0.69
CHMP4B-201ENST00000217402 RASL10AQ92737 203 aa19.37■□□□□ 0.69
CHMP4B-201ENST00000217402 PGLYRP4Q96LB8 373 aa19.37■□□□□ 0.69
CHMP4B-201ENST00000217402 GFRA4Q9GZZ7 299 aa19.37■□□□□ 0.69
CHMP4B-201ENST00000217402 C7orf77A4D0Y5 90 aa19.36■□□□□ 0.69
CHMP4B-201ENST00000217402 CTRLP40313 264 aa19.36■□□□□ 0.69
CHMP4B-201ENST00000217402 ZFP82Q8N141 532 aa19.36■□□□□ 0.69
CHMP4B-201ENST00000217402 SYT8Q8NBV8 401 aa19.36■□□□□ 0.69
CHMP4B-201ENST00000217402 F2Z2F3 143 aa19.35■□□□□ 0.69
CHMP4B-201ENST00000217402 SNAPINO95295 136 aa19.35■□□□□ 0.69
CHMP4B-201ENST00000217402 RHEBQ15382 184 aa19.35■□□□□ 0.69
CHMP4B-201ENST00000217402 RPS10P5Q9NQ39 176 aa19.35■□□□□ 0.69
CHMP4B-201ENST00000217402 SMIM27A0A1W2PRY6 76 aa19.34■□□□□ 0.69
CHMP4B-201ENST00000217402 Q6ZTC4 211 aa19.34■□□□□ 0.69
CHMP4B-201ENST00000217402 FAM231BA6NCW3 169 aa19.33■□□□□ 0.69
CHMP4B-201ENST00000217402 PTH2Q96A98 100 aa19.33■□□□□ 0.69
CHMP4B-201ENST00000217402 NAT8BQ9UHF3 227 aa19.33■□□□□ 0.69
CHMP4B-201ENST00000217402 FOXA3P55318 350 aaPredicted RBP19.33■□□□□ 0.68
CHMP4B-201ENST00000217402 NUP35Q8NFH5 326 aa19.33■□□□□ 0.68
CHMP4B-201ENST00000217402 CTDSP1Q9GZU7 261 aa19.33■□□□□ 0.68
CHMP4B-201ENST00000217402 NXPH4O95158 308 aa19.32■□□□□ 0.68
CHMP4B-201ENST00000217402 IGHV3-53P01767 116 aa19.32■□□□□ 0.68
CHMP4B-201ENST00000217402 JPT2Q9H910 190 aa19.32■□□□□ 0.68
CHMP4B-201ENST00000217402 CACNG7P62955 275 aa19.31■□□□□ 0.68
CHMP4B-201ENST00000217402 HTN3P15516 51 aa19.3■□□□□ 0.68
CHMP4B-201ENST00000217402 MSRB1Q9NZV6 116 aa19.3■□□□□ 0.68
CHMP4B-201ENST00000217402 NTF3P20783 257 aa19.29■□□□□ 0.68
CHMP4B-201ENST00000217402 BORCS7Q96B45 105 aa19.29■□□□□ 0.68
CHMP4B-201ENST00000217402 CNFNQ9BYD5 112 aa19.29■□□□□ 0.68
CHMP4B-201ENST00000217402 A0A087WWC5 75 aa19.29■□□□□ 0.68
CHMP4B-201ENST00000217402 FAM3BP58499 235 aaPredicted RBP19.29■□□□□ 0.68
CHMP4B-201ENST00000217402 TWIST1Q15672 202 aa19.29■□□□□ 0.68
CHMP4B-201ENST00000217402 PIK3CD-AS1Q5SR53 167 aa19.29■□□□□ 0.68
CHMP4B-201ENST00000217402 POM121L12Q8N7R1 296 aa19.29■□□□□ 0.68
CHMP4B-201ENST00000217402 OR4C5Q8NGB2 326 aa19.29■□□□□ 0.68
CHMP4B-201ENST00000217402 CFAP126Q5VTH2 177 aa19.28■□□□□ 0.68
CHMP4B-201ENST00000217402 ZNF479Q96JC4 524 aa19.28■□□□□ 0.68
CHMP4B-201ENST00000217402 C18orf15Q96N68 181 aa19.28■□□□□ 0.68
CHMP4B-201ENST00000217402 NDUFAF3Q9BU61 184 aa19.28■□□□□ 0.68
CHMP4B-201ENST00000217402 TRAV4A0A0B4J268 109 aa19.27■□□□□ 0.68
CHMP4B-201ENST00000217402 A0A1B0GUT8 65 aa19.27■□□□□ 0.68
CHMP4B-201ENST00000217402 ATP5G1P05496 136 aa19.27■□□□□ 0.68
CHMP4B-201ENST00000217402 ATRAIDQ6UW56 229 aa19.27■□□□□ 0.68
CHMP4B-201ENST00000217402 IGHV4-4A0A075B6R2 117 aa19.26■□□□□ 0.67
CHMP4B-201ENST00000217402 A8MWV9 139 aa19.26■□□□□ 0.67
CHMP4B-201ENST00000217402 RS1O15537 224 aa19.26■□□□□ 0.67
CHMP4B-201ENST00000217402 WDR73Q6P4I2 378 aa19.26■□□□□ 0.67
CHMP4B-201ENST00000217402 SAMD10Q9BYL1 202 aa19.26■□□□□ 0.67
CHMP4B-201ENST00000217402 A0A087WWL8 130 aa19.25■□□□□ 0.67
CHMP4B-201ENST00000217402 IGHV3-73A0A0B4J1V6 119 aa19.25■□□□□ 0.67
CHMP4B-201ENST00000217402 FAM74A4Q5TZK3 123 aa19.25■□□□□ 0.67
CHMP4B-201ENST00000217402 AP1S3Q96PC3 154 aa19.25■□□□□ 0.67
CHMP4B-201ENST00000217402 TMEM242Q9NWH2 141 aa19.25■□□□□ 0.67
CHMP4B-201ENST00000217402 WWC2-AS2Q96NR7 200 aa19.24■□□□□ 0.67
CHMP4B-201ENST00000217402 F5H768 121 aa19.23■□□□□ 0.67
CHMP4B-201ENST00000217402 C14orf178Q8N769 122 aaPredicted RBP19.23■□□□□ 0.67
CHMP4B-201ENST00000217402 URGCP-MRPS24S4R325 110 aa19.23■□□□□ 0.67
CHMP4B-201ENST00000217402 DEFB131BA0A096LNP1 70 aa19.22■□□□□ 0.67
CHMP4B-201ENST00000217402 ATP6V1G1O75348 118 aa19.22■□□□□ 0.67
CHMP4B-201ENST00000217402 HOXA5P20719 270 aa19.22■□□□□ 0.67
CHMP4B-201ENST00000217402 MRPL54Q6P161 138 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms