RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Mustn1Q99JI1 82 aa7.4□□□□□ -1.22
Clcn3-202ENSMUST00000056508 Morn5Q9DAI9 170 aa7.4□□□□□ -1.22
Clcn3-202ENSMUST00000056508 Neo1P97798 1493 aa7.4□□□□□ -1.22
Clcn3-202ENSMUST00000056508 Abcc1O35379 1528 aa7.4□□□□□ -1.22
Clcn3-202ENSMUST00000056508 Cox8cA6H666 72 aa7.4□□□□□ -1.22
Clcn3-202ENSMUST00000056508 Hist1h4aP62806 103 aaKnown RBP7.4□□□□□ -1.22
Clcn3-202ENSMUST00000056508 Olfr967Q7TRA6 310 aa7.4□□□□□ -1.22
Clcn3-202ENSMUST00000056508 Ramp1Q9WTJ5 148 aa7.4□□□□□ -1.22
Clcn3-202ENSMUST00000056508 Gm20767O70517 169 aa7.4□□□□□ -1.23
Clcn3-202ENSMUST00000056508 MycbQ6P8Z1 170 aa7.4□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Atg4dQ8BGV9 474 aa7.4□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Rabac1Q9Z0S9 185 aa7.4□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Zfp352A2AML7 551 aa7.4□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Alkal1J3QPP8 127 aa7.4□□□□□ -1.23
Clcn3-202ENSMUST00000056508 P01822 137 aa7.4□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Thy1P01831 162 aa7.4□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Zfp595Q8BIN6 625 aa7.4□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Tssk6Q925K9 273 aa7.4□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Q9DAQ5 155 aa7.4□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Ighv1-22A0A075B5U7 117 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Tmem243B2RVB9 118 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Prss32E9Q409 334 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 P01747 120 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Klk8Q61955 260 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Trpt1Q8K3A2 249 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Erv3Q9DAX3 200 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Abca8bQ8K440 1620 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 NpwA0A1L1STR8 176 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 9430015G10RikA2ASP7 199 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Nhlrc3Q8CCH2 347 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Olfr266Q8VFC3 316 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Atp6v0e1Q9CQD8 81 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Rps21Q9CQR2 83 aaKnown RBP7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Trbv1A0A0B4J1G7 116 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Trav12-1A0N8R1 115 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 CortP56469 109 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Loxl1P97873 607 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Gm826Q3UQ74 109 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 1810065E05RikQ5NC41 235 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 A830031A19RikQ8BNT5 113 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Mmgt2Q8R3L0 123 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Nkg7Q99PA5 165 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Q9D4G1 230 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Fam166aQ9D4K5 319 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Nat8Q9JIY7 227 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Cep152A2AUM9 1736 aaKnown RBP7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Robo2Q7TPD3 1470 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Ighv2-6-8A0A0A6YWY9 116 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Snrpd3P62320 126 aaKnown RBP7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Ybx1P62960 322 aaKnown RBP7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Fbln1Q08879 705 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Vmn1r192Q8K4C9 300 aa7.39□□□□□ -1.23
Clcn3-202ENSMUST00000056508 4930595D18RikD3Z642 64 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Xcl1P47993 114 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Ubald1Q6P3B2 176 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 MkxQ8BIA3 353 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 A730015C16RikQ8C992 119 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Olfr482Q8VG03 323 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Timm9Q9WV98 89 aaKnown RBP7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Mtatp8P03930 67 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Dynlrb1P62627 96 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Fam219bQ14DQ1 197 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Olfr311Q5NC59 308 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 TigarQ8BZA9 269 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 C1ql2Q8CFR0 287 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Tmem242Q8VCR3 140 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 CstadQ9D245 104 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Mrps11Q9DCA2 191 aaKnown RBP7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Gm28778A0A087WSK7 233 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Ighv16-1A0A0A6YW39 117 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Olfr180Q7TS48 317 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Olfr493Q8VEW5 314 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Olfr492Q8VFD1 314 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Gpx7Q99LJ6 186 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Bcl9Q9D219 1425 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Gp9O88186 177 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 ApcsP12246 224 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 GypaP14220 168 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Cfhr1Q61406 343 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Tnfsf18Q7TS55 173 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Tmem186Q9CR76 216 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Naa38Q9D2U5 125 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 H2al3Q9D4U4 128 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Foxe3Q9QY14 288 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 PxdnQ3UQ28 1475 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Zfp456B2RUK9 458 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Adcy10Q8C0T9 1614 aa7.38□□□□□ -1.23
Clcn3-202ENSMUST00000056508 P01741 114 aa7.37□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Cd8bP10300 213 aa7.37□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Gtf3aQ8VHT7 364 aa7.37□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Dip2aQ8BWT5 1523 aa7.37□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Gm21854A0A087WNM4 232 aa7.37□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Fam181aJ3QNB7 292 aa7.37□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Vmn1r74Q8R290 304 aa7.37□□□□□ -1.23
Clcn3-202ENSMUST00000056508 1810049J17RikQ3V2G9 153 aa7.37□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Derl3Q9D8K3 228 aa7.37□□□□□ -1.23
Clcn3-202ENSMUST00000056508 PtgesQ9JM51 153 aa7.37□□□□□ -1.23
Clcn3-202ENSMUST00000056508 Znf608Q56A10 1511 aa7.37□□□□□ -1.23
Clcn3-202ENSMUST00000056508 MestQ07646 335 aa7.37□□□□□ -1.23
Clcn3-202ENSMUST00000056508 SdhcQ9CZB0 169 aaKnown RBP7.37□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms