RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Prss30Q9QYZ9 310 aa13.45□□□□□ -0.26
Trim28-201ENSMUST00000005705 Zfp980A2A9J5 645 aa13.44□□□□□ -0.26
Trim28-201ENSMUST00000005705 Nat8f7E0CYR6 227 aa13.44□□□□□ -0.26
Trim28-201ENSMUST00000005705 Hoxa6P09092 232 aa13.44□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm10803Q3TZS6 135 aa13.44□□□□□ -0.26
Trim28-201ENSMUST00000005705 5730522E02RikQ5SP45 163 aa13.44□□□□□ -0.26
Trim28-201ENSMUST00000005705 Prss3Q792Z0 246 aaKnown RBP13.44□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr399Q7TRX3 311 aa13.44□□□□□ -0.26
Trim28-201ENSMUST00000005705 Tmem70Q921N7 253 aa13.44□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gp2Q9D733 531 aa13.44□□□□□ -0.26
Trim28-201ENSMUST00000005705 Inafm1E9PV59 130 aa13.44□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr1371Q7TQT7 311 aa13.44□□□□□ -0.26
Trim28-201ENSMUST00000005705 Rab11fip5Q8R361 645 aa13.44□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr470Q8VF65 314 aa13.44□□□□□ -0.26
Trim28-201ENSMUST00000005705 2200002J24RikQ9D807 110 aa13.44□□□□□ -0.26
Trim28-201ENSMUST00000005705 Trem3Q9JKE1 183 aa13.44□□□□□ -0.26
Trim28-201ENSMUST00000005705 Igkv14-111A0A140T8P9 117 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr1293-psA0A1L1SVB5 326 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Samt3A2ARK7 233 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm20422E9PUR3 255 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Taar9Q5QD04 348 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Slc37a1Q8R070 531 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Poldip2Q91VA6 368 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Scgb3a2Q920H1 91 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 MmdQ9CQY7 238 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Prpf8Q99PV0 2335 aaKnown RBP13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Igkv5-37A0A140T8N4 115 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm10020E9QAZ2 204 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 P04212 136 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr358Q7TRY5 330 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Srsf7Q8BL97 267 aaKnown RBP13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Phf13Q8K2W6 296 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr1271Q8VG62 305 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Rpl15Q9CZM2 204 aaKnown RBP13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Cby1Q9D1C2 127 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Tarm1B6A8R8 288 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Tmem92B7ZWI3 162 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm10203F6QJ09 66 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm10130F6ZHM5 101 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Atpif1O35143 106 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Hoxd11P23813 323 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Pmp2P24526 132 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Rpl31P62900 125 aaKnown RBP13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Cacng8Q8VHW2 423 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Rnf115Q9D0C1 305 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gpa33Q9JKA5 319 aa13.43□□□□□ -0.26
Trim28-201ENSMUST00000005705 Trav4-2A0A075B638 110 aa13.42□□□□□ -0.26
Trim28-201ENSMUST00000005705 P01789 122 aa13.42□□□□□ -0.26
Trim28-201ENSMUST00000005705 KhkP97328 298 aa13.42□□□□□ -0.26
Trim28-201ENSMUST00000005705 Mex3bQ69Z36 601 aaKnown RBP13.42□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm5868Q8BJG1 145 aa13.42□□□□□ -0.26
Trim28-201ENSMUST00000005705 Ankrd55Q8BLD6 626 aa13.42□□□□□ -0.26
Trim28-201ENSMUST00000005705 CenpmQ9CQA0 180 aa13.42□□□□□ -0.26
Trim28-201ENSMUST00000005705 Kiaa1549Q68FD9 1940 aa13.42□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm45213A0A0U1RNZ6 101 aa13.42□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm12830F6XVH0 157 aa13.42□□□□□ -0.26
Trim28-201ENSMUST00000005705 P01915 264 aa13.42□□□□□ -0.26
Trim28-201ENSMUST00000005705 Mc5rP41149 325 aa13.42□□□□□ -0.26
Trim28-201ENSMUST00000005705 Fam3dP97805 223 aa13.42□□□□□ -0.26
Trim28-201ENSMUST00000005705 Chchd1Q9CQA6 118 aa13.42□□□□□ -0.26
Trim28-201ENSMUST00000005705 Cmtm2bQ9DAC0 210 aa13.42□□□□□ -0.26
Trim28-201ENSMUST00000005705 1500009C09RikD3YYW9 81 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm8653K9J7G2 307 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Vmn1r117L7N2C9 307 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Cd59aO55186 123 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Klf14Q19A41 325 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Rhbdd2Q8VEK2 361 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Ramp3Q9WUP1 147 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Dopey2Q3UHQ6 2295 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr912A0A1L1SSS5 310 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Bmpr1bP36898 502 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Q0VG62 139 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr1246Q7TQZ6 314 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Zfp799Q8BHK4 648 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Fam174bQ8K064 153 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 TprkbQ8QZZ7 175 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Ighv1-18A0A0A6YXN4 117 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm4133K9J7G6 307 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Ly6c1P0CW02 131 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Ucp1P12242 307 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Lyz1P17897 148 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Dynlrb1P62627 96 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Tmem184aQ3UFJ6 425 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Wdr82Q8BFQ4 313 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Ssbp2Q9CYZ8 361 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Tnfrsf13bQ9ET35 249 aa13.41□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm44596A0A0N4SVA0 210 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Slc35d1A2AKQ0 355 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 H60bB1B212 251 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Foxi3E0CZH3 425 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm6034E9Q101 117 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr920E9Q413 310 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr609E9Q4X7 319 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Lgals9O08573 353 aaKnown RBP13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Ifna5P07349 189 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Plk3Q60806 631 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Olfr1404Q8VGE1 313 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Gm14214V9GX35 225 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Trbv1A0A0B4J1G7 116 aa13.4□□□□□ -0.26
Trim28-201ENSMUST00000005705 Rhox7bA6PW38 321 aa13.4□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 24.5 ms