RNA–Protein interactions for RNA: ENST00000640421.1

SPIN3-238, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,872 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-238ENST00000640421 C15orf54Q8N8G6 183 aa12.91□□□□□ -0.34
SPIN3-238ENST00000640421 OR2D3Q8NGH3 330 aa12.91□□□□□ -0.34
SPIN3-238ENST00000640421 KIR2DL5BQ8NHK3 375 aa12.91□□□□□ -0.34
SPIN3-238ENST00000640421 C1QTNF4Q9BXJ3 329 aa12.89□□□□□ -0.35
SPIN3-238ENST00000640421 TP53TG3Q9ULZ0 132 aa12.89□□□□□ -0.35
SPIN3-238ENST00000640421 TENM3Q9P273 2699 aa12.89□□□□□ -0.35
SPIN3-238ENST00000640421 IGHV3OR16-12A0A075B7B8 117 aa12.89□□□□□ -0.35
SPIN3-238ENST00000640421 A0A087WWC5 75 aa12.89□□□□□ -0.35
SPIN3-238ENST00000640421 TMEM189A5PLL7 270 aa12.89□□□□□ -0.35
SPIN3-238ENST00000640421 SCO1O75880 301 aa12.89□□□□□ -0.35
SPIN3-238ENST00000640421 APOC4P55056 127 aa12.89□□□□□ -0.35
SPIN3-238ENST00000640421 ANAPC16Q96DE5 110 aa12.89□□□□□ -0.35
SPIN3-238ENST00000640421 GRIFINA4D1Z8 144 aa12.88□□□□□ -0.35
SPIN3-238ENST00000640421 H7BYZ3 331 aa12.88□□□□□ -0.35
SPIN3-238ENST00000640421 GNRH2O43555 120 aa12.88□□□□□ -0.35
SPIN3-238ENST00000640421 TDRG1Q3Y452 100 aa12.88□□□□□ -0.35
SPIN3-238ENST00000640421 C20orf144Q9BQM9 153 aa12.88□□□□□ -0.35
SPIN3-238ENST00000640421 DNAH9Q9NYC9 4486 aa12.88□□□□□ -0.35
SPIN3-238ENST00000640421 IGHV1OR15-1A0A075B7D0 117 aa12.87□□□□□ -0.35
SPIN3-238ENST00000640421 HTN1P15515 57 aa12.87□□□□□ -0.35
SPIN3-238ENST00000640421 DEFB135Q30KP9 77 aa12.87□□□□□ -0.35
SPIN3-238ENST00000640421 FAM159AQ6UWV7 190 aa12.87□□□□□ -0.35
SPIN3-238ENST00000640421 GTSF1Q8WW33 167 aa12.87□□□□□ -0.35
SPIN3-238ENST00000640421 LINC01587Q99440 93 aa12.87□□□□□ -0.35
SPIN3-238ENST00000640421 HUWE1Q7Z6Z7 4374 aaKnown RBP12.87□□□□□ -0.35
SPIN3-238ENST00000640421 PPP1R2P9O14990 202 aa12.87□□□□□ -0.35
SPIN3-238ENST00000640421 TYMSP04818 313 aa12.87□□□□□ -0.35
SPIN3-238ENST00000640421 CT83Q5H943 113 aa12.87□□□□□ -0.35
SPIN3-238ENST00000640421 ZNF705AQ6ZN79 300 aaPredicted RBP12.87□□□□□ -0.35
SPIN3-238ENST00000640421 CTDSP1Q9GZU7 261 aa12.87□□□□□ -0.35
SPIN3-238ENST00000640421 TCL1AP56279 114 aa12.86□□□□□ -0.35
SPIN3-238ENST00000640421 PYGO2Q9BRQ0 406 aa12.86□□□□□ -0.35
SPIN3-238ENST00000640421 TMEM208Q9BTX3 173 aa12.86□□□□□ -0.35
SPIN3-238ENST00000640421 TMEM242Q9NWH2 141 aa12.86□□□□□ -0.35
SPIN3-238ENST00000640421 AZU1P20160 251 aa12.85□□□□□ -0.35
SPIN3-238ENST00000640421 TMEM88Q6PEY1 159 aa12.85□□□□□ -0.35
SPIN3-238ENST00000640421 CBLN2Q8IUK8 224 aa12.85□□□□□ -0.35
SPIN3-238ENST00000640421 TMEM256Q8N2U0 113 aa12.85□□□□□ -0.35
SPIN3-238ENST00000640421 TSKUQ8WUA8 353 aa12.85□□□□□ -0.35
SPIN3-238ENST00000640421 NEU1Q99519 415 aa12.85□□□□□ -0.35
SPIN3-238ENST00000640421 IL36BQ9NZH7 164 aa12.85□□□□□ -0.35
SPIN3-238ENST00000640421 GOLT1BQ9Y3E0 138 aa12.85□□□□□ -0.35
SPIN3-238ENST00000640421 SMIM27A0A1W2PRY6 76 aa12.84□□□□□ -0.35
SPIN3-238ENST00000640421 A8MWL6 223 aa12.84□□□□□ -0.35
SPIN3-238ENST00000640421 LINC00467Q9BRT7 94 aa12.84□□□□□ -0.35
SPIN3-238ENST00000640421 MDFICQ9P1T7 246 aa12.84□□□□□ -0.35
SPIN3-238ENST00000640421 COL7A1Q02388 2944 aa12.84□□□□□ -0.35
SPIN3-238ENST00000640421 CBY3A6NI87 242 aa12.83□□□□□ -0.36
SPIN3-238ENST00000640421 UBE2CO00762 179 aa12.83□□□□□ -0.36
SPIN3-238ENST00000640421 SPRY2O43597 315 aa12.83□□□□□ -0.36
SPIN3-238ENST00000640421 IGLC6P0CF74 106 aa12.83□□□□□ -0.36
SPIN3-238ENST00000640421 RNASE3P12724 160 aaKnown RBP12.83□□□□□ -0.36
SPIN3-238ENST00000640421 FAM3BP58499 235 aaPredicted RBP12.83□□□□□ -0.36
SPIN3-238ENST00000640421 DEFB121Q5J5C9 76 aa12.83□□□□□ -0.36
SPIN3-238ENST00000640421 KCNS1Q96KK3 526 aa12.83□□□□□ -0.36
SPIN3-238ENST00000640421 URGCP-MRPS24S4R325 110 aa12.83□□□□□ -0.36
SPIN3-238ENST00000640421 IGHV3-16A0A0C4DH30 117 aa12.82□□□□□ -0.36
SPIN3-238ENST00000640421 HIGD1CA8MV81 97 aa12.82□□□□□ -0.36
SPIN3-238ENST00000640421 Q6ZWC4 215 aa12.82□□□□□ -0.36
SPIN3-238ENST00000640421 X6R8D5 127 aa12.82□□□□□ -0.36
SPIN3-238ENST00000640421 H3BVH4 76 aa12.82□□□□□ -0.36
SPIN3-238ENST00000640421 RPS20P60866 119 aaKnown RBP12.82□□□□□ -0.36
SPIN3-238ENST00000640421 SBSPONQ8IVN8 264 aa12.82□□□□□ -0.36
SPIN3-238ENST00000640421 MUC4Q99102 2169 aa12.82□□□□□ -0.36
SPIN3-238ENST00000640421 MUC21A0A0G2JKD1 596 aa12.81□□□□□ -0.36
SPIN3-238ENST00000640421 MUC21A0A140T8X8 626 aa12.81□□□□□ -0.36
SPIN3-238ENST00000640421 C11orf72Q8NBR9 251 aa12.81□□□□□ -0.36
SPIN3-238ENST00000640421 NUP35Q8NFH5 326 aa12.81□□□□□ -0.36
SPIN3-238ENST00000640421 RNF183Q96D59 192 aa12.81□□□□□ -0.36
SPIN3-238ENST00000640421 RCHY1Q96PM5 261 aa12.81□□□□□ -0.36
SPIN3-238ENST00000640421 TPPP3Q9BW30 176 aa12.81□□□□□ -0.36
SPIN3-238ENST00000640421 GFRA4Q9GZZ7 299 aa12.81□□□□□ -0.36
SPIN3-238ENST00000640421 RETNQ9HD89 108 aa12.81□□□□□ -0.36
SPIN3-238ENST00000640421 XKRY2A2RUG3 117 aa12.8□□□□□ -0.36
SPIN3-238ENST00000640421 CXCL1P09341 107 aa12.8□□□□□ -0.36
SPIN3-238ENST00000640421 ASIPP42127 132 aa12.8□□□□□ -0.36
SPIN3-238ENST00000640421 DNLZQ5SXM8 178 aa12.8□□□□□ -0.36
SPIN3-238ENST00000640421 PGLYRP4Q96LB8 373 aa12.8□□□□□ -0.36
SPIN3-238ENST00000640421 ARMS2P0C7Q2 107 aa12.8□□□□□ -0.36
SPIN3-238ENST00000640421 FOXA3P55318 350 aaPredicted RBP12.8□□□□□ -0.36
SPIN3-238ENST00000640421 LYZL1Q6UWQ5 148 aa12.8□□□□□ -0.36
SPIN3-238ENST00000640421 FER1L6-AS1Q8NA97 138 aa12.8□□□□□ -0.36
SPIN3-238ENST00000640421 RNASE8Q8TDE3 154 aaKnown RBP12.8□□□□□ -0.36
SPIN3-238ENST00000640421 TIMM8BQ9Y5J9 83 aaPredicted RBP12.8□□□□□ -0.36
SPIN3-238ENST00000640421 FAM231BA6NCW3 169 aa12.79□□□□□ -0.36
SPIN3-238ENST00000640421 MRAPQ8TCY5 172 aa12.79□□□□□ -0.36
SPIN3-238ENST00000640421 YPEL4Q96NS1 127 aa12.79□□□□□ -0.36
SPIN3-238ENST00000640421 IMMP2LQ96T52 175 aa12.79□□□□□ -0.36
SPIN3-238ENST00000640421 OVOL2Q9BRP0 275 aa12.79□□□□□ -0.36
SPIN3-238ENST00000640421 SSBP4Q9BWG4 385 aaPredicted RBP12.79□□□□□ -0.36
SPIN3-238ENST00000640421 GSN-AS1Q9NRJ2 163 aa12.79□□□□□ -0.36
SPIN3-238ENST00000640421 NAT8BQ9UHF3 227 aa12.79□□□□□ -0.36
SPIN3-238ENST00000640421 TRGV11A0A075B6L2 103 aa12.78□□□□□ -0.36
SPIN3-238ENST00000640421 PLAC8L1A1L4L8 177 aa12.78□□□□□ -0.36
SPIN3-238ENST00000640421 CXorf65A6NEN9 183 aa12.78□□□□□ -0.36
SPIN3-238ENST00000640421 SPINK4O60575 86 aa12.78□□□□□ -0.36
SPIN3-238ENST00000640421 S100A4P26447 101 aaKnown RBP12.78□□□□□ -0.36
SPIN3-238ENST00000640421 CTRLP40313 264 aa12.78□□□□□ -0.36
SPIN3-238ENST00000640421 OR11H2Q8NH07 326 aa12.78□□□□□ -0.36
SPIN3-238ENST00000640421 C9orf85Q96MD7 179 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms