RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 A0A0U1RQV1 116 aa12.74□□□□□ -0.37
CACNA1A-221ENST00000636012 NDUFA4O00483 81 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 IGHV3-30P01768 117 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 IGHV3-33P01772 117 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 IGHV3-30-3P0DP02 117 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 IGHV3-30-5P0DP03 117 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 ZNF134P52741 427 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 TRBV24-1A0A075B6N3 115 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 TRAV1-1A0A0B4J248 108 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 FGF16O43320 207 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 OR11H6Q8NGC7 330 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 COX7B2Q8TF08 81 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 A0A1B0GUS0 222 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 MRPL23Q16540 153 aaKnown RBP12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 IGHV1-24A0A0C4DH33 117 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 A0A1B0GX51 115 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 FNDC10F2Z333 226 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 TRBV6-6A0A0A6YYG2 114 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 ASPHD1Q5U4P2 390 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 THSD7BQ9C0I4 1608 aa12.73□□□□□ -0.37
CACNA1A-221ENST00000636012 C17orf82Q86X59 251 aaPredicted RBP12.72□□□□□ -0.37
CACNA1A-221ENST00000636012 IGFBPL1Q8WX77 278 aa12.72□□□□□ -0.37
CACNA1A-221ENST00000636012 CARD19Q96LW7 228 aa12.72□□□□□ -0.37
CACNA1A-221ENST00000636012 SDHAF1A6NFY7 115 aa12.72□□□□□ -0.37
CACNA1A-221ENST00000636012 ZNF833PQ6ZTB9 187 aa12.72□□□□□ -0.37
CACNA1A-221ENST00000636012 WFDC11Q8NEX6 87 aa12.72□□□□□ -0.37
CACNA1A-221ENST00000636012 FANCD2OSQ96PS1 177 aa12.72□□□□□ -0.37
CACNA1A-221ENST00000636012 GFRA4Q9GZZ7 299 aa12.72□□□□□ -0.37
CACNA1A-221ENST00000636012 UTF1Q5T230 341 aa12.72□□□□□ -0.37
CACNA1A-221ENST00000636012 ORMDL1Q9P0S3 153 aa12.72□□□□□ -0.37
CACNA1A-221ENST00000636012 Q6ZRM9 215 aa12.72□□□□□ -0.37
CACNA1A-221ENST00000636012 CYTL1Q9NRR1 136 aa12.72□□□□□ -0.37
CACNA1A-221ENST00000636012 NDUFA4L2Q9NRX3 87 aa12.72□□□□□ -0.37
CACNA1A-221ENST00000636012 PRSS46E5RG02 174 aa12.71□□□□□ -0.37
CACNA1A-221ENST00000636012 FUSP35637 526 aaKnown RBP eCLIP12.71□□□□□ -0.37
CACNA1A-221ENST00000636012 GTSF1Q8WW33 167 aa12.71□□□□□ -0.37
CACNA1A-221ENST00000636012 K7ERS5 55 aa12.71□□□□□ -0.37
CACNA1A-221ENST00000636012 C2orf66Q6UXQ4 117 aa12.71□□□□□ -0.37
CACNA1A-221ENST00000636012 K7ERJ3 54 aa12.71□□□□□ -0.37
CACNA1A-221ENST00000636012 MUSTN1Q8IVN3 82 aa12.71□□□□□ -0.37
CACNA1A-221ENST00000636012 MP68P56378 58 aa12.71□□□□□ -0.38
CACNA1A-221ENST00000636012 MRPL51Q4U2R6 128 aaKnown RBP12.71□□□□□ -0.38
CACNA1A-221ENST00000636012 RETNQ9HD89 108 aa12.71□□□□□ -0.38
CACNA1A-221ENST00000636012 TPSG1Q9NRR2 321 aa12.71□□□□□ -0.38
CACNA1A-221ENST00000636012 IGHV4-30-4P0DP06 118 aa12.7□□□□□ -0.38
CACNA1A-221ENST00000636012 IGHV4-31P0DP07 118 aa12.7□□□□□ -0.38
CACNA1A-221ENST00000636012 AGRNO00468 2067 aa12.7□□□□□ -0.38
CACNA1A-221ENST00000636012 MRPL27Q9P0M9 148 aaKnown RBP12.7□□□□□ -0.38
CACNA1A-221ENST00000636012 EML5Q05BV3 1969 aa12.7□□□□□ -0.38
CACNA1A-221ENST00000636012 A0A096LNI7 61 aa12.7□□□□□ -0.38
CACNA1A-221ENST00000636012 IGLL5B9A064 214 aa12.7□□□□□ -0.38
CACNA1A-221ENST00000636012 C17orf58Q2M2W7 97 aa12.7□□□□□ -0.38
CACNA1A-221ENST00000636012 GPHB5Q86YW7 130 aa12.7□□□□□ -0.38
CACNA1A-221ENST00000636012 C17orf77Q96MU5 243 aa12.7□□□□□ -0.38
CACNA1A-221ENST00000636012 APRG1Q8IVJ8 170 aa12.69□□□□□ -0.38
CACNA1A-221ENST00000636012 U3KQE9 123 aa12.69□□□□□ -0.38
CACNA1A-221ENST00000636012 PTPRQQ9UMZ3 2332 aa12.69□□□□□ -0.38
CACNA1A-221ENST00000636012 C1orf194Q5T5A4 169 aa12.69□□□□□ -0.38
CACNA1A-221ENST00000636012 NCR3O14931 201 aa12.69□□□□□ -0.38
CACNA1A-221ENST00000636012 YPEL3P61236 119 aaPredicted RBP12.69□□□□□ -0.38
CACNA1A-221ENST00000636012 CYYR1Q96J86 154 aa12.69□□□□□ -0.38
CACNA1A-221ENST00000636012 LYPD6Q86Y78 171 aa12.69□□□□□ -0.38
CACNA1A-221ENST00000636012 LY96Q9Y6Y9 160 aa12.69□□□□□ -0.38
CACNA1A-221ENST00000636012 A0A1B0GW64 132 aa12.68□□□□□ -0.38
CACNA1A-221ENST00000636012 DEFB112Q30KQ8 113 aa12.68□□□□□ -0.38
CACNA1A-221ENST00000636012 ETV2O00321 342 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-221ENST00000636012 FAM231BA6NCW3 169 aa12.68□□□□□ -0.38
CACNA1A-221ENST00000636012 HOXB4P17483 251 aaPredicted RBP12.68□□□□□ -0.38
CACNA1A-221ENST00000636012 C5orf38Q86SI9 138 aa12.68□□□□□ -0.38
CACNA1A-221ENST00000636012 QRFPP83859 136 aa12.68□□□□□ -0.38
CACNA1A-221ENST00000636012 IGHV7-4-1A0A0J9YVY3 117 aa12.68□□□□□ -0.38
CACNA1A-221ENST00000636012 COLCA2A8K830 154 aa12.68□□□□□ -0.38
CACNA1A-221ENST00000636012 C9orf66Q5T8R8 295 aa12.68□□□□□ -0.38
CACNA1A-221ENST00000636012 TRAV13-2A0A0B4J235 113 aa12.67□□□□□ -0.38
CACNA1A-221ENST00000636012 SLAQ13239 276 aa12.67□□□□□ -0.38
CACNA1A-221ENST00000636012 Q8N8P6 123 aa12.67□□□□□ -0.38
CACNA1A-221ENST00000636012 MRPL53Q96EL3 112 aaKnown RBP12.67□□□□□ -0.38
CACNA1A-221ENST00000636012 TRBV19A0A075B6N1 114 aa12.67□□□□□ -0.38
CACNA1A-221ENST00000636012 B5MCH6 92 aa12.67□□□□□ -0.38
CACNA1A-221ENST00000636012 CRIPAKQ8N1N5 446 aa12.67□□□□□ -0.38
CACNA1A-221ENST00000636012 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-221ENST00000636012 IGKV2-29A2NJV5 120 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-221ENST00000636012 HERVK_113P63121 156 aa12.66□□□□□ -0.38
CACNA1A-221ENST00000636012 NDUFA12Q9UI09 145 aa12.66□□□□□ -0.38
CACNA1A-221ENST00000636012 SLURP1P55000 103 aa12.66□□□□□ -0.38
CACNA1A-221ENST00000636012 AMTNQ6UX39 209 aa12.66□□□□□ -0.38
CACNA1A-221ENST00000636012 NPBQ8NG41 125 aa12.66□□□□□ -0.38
CACNA1A-221ENST00000636012 F6UB75 175 aa12.66□□□□□ -0.38
CACNA1A-221ENST00000636012 VPREB3Q9UKI3 123 aa12.66□□□□□ -0.38
CACNA1A-221ENST00000636012 OTOGLQ3ZCN5 2332 aa12.66□□□□□ -0.38
CACNA1A-221ENST00000636012 IGLV3-9A0A075B6K5 115 aa12.66□□□□□ -0.38
CACNA1A-221ENST00000636012 BAALC-AS2P0C853 105 aa12.66□□□□□ -0.38
CACNA1A-221ENST00000636012 F8W735 103 aaPredicted RBP12.66□□□□□ -0.38
CACNA1A-221ENST00000636012 GNRH2O43555 120 aa12.66□□□□□ -0.38
CACNA1A-221ENST00000636012 DIAPH2-AS1Q14236 149 aa12.66□□□□□ -0.38
CACNA1A-221ENST00000636012 VSIG2Q96IQ7 327 aa12.65□□□□□ -0.38
CACNA1A-221ENST00000636012 CCL18P55774 89 aa12.65□□□□□ -0.38
CACNA1A-221ENST00000636012 H3BMG7 143 aa12.65□□□□□ -0.38
CACNA1A-221ENST00000636012 LMO1P25800 156 aa12.65□□□□□ -0.38
CACNA1A-221ENST00000636012 DEFB113Q30KQ7 82 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms