RNA–Protein interactions for RNA: ENST00000635742.1

CACNA1A-216, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 1,910 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-216ENST00000635742 MAP6D1Q9H9H5 199 aa7.43□□□□□ -1.22
CACNA1A-216ENST00000635742 AGRNO00468 2067 aa7.43□□□□□ -1.22
CACNA1A-216ENST00000635742 KNCNA6PVL3 124 aa7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 IGKV3-20P01619 116 aa7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 FOXA3P55318 350 aaPredicted RBP7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 PRR31Q5SQ13 230 aa7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 FOXI2Q6ZQN5 318 aa7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 MRPL18Q9H0U6 180 aaKnown RBP7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 ZNF256Q9Y2P7 627 aaPredicted RBP7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 TRAV25A0A0B4J276 109 aa7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 TRBV7-9A0A0J9YWB2 115 aa7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 GRIFINA4D1Z8 144 aa7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 OR4C46A6NHA9 309 aa7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 ARMS2P0C7Q2 107 aa7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 EBLN2Q6P2I7 272 aa7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 ATP5L2Q7Z4Y8 100 aa7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 LINC00482Q8N8I6 264 aa7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 PACRGQ96M98 296 aaPredicted RBP7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 GNB1LQ9BYB4 327 aa7.42□□□□□ -1.22
CACNA1A-216ENST00000635742 KLLNB2CW77 178 aa7.41□□□□□ -1.22
CACNA1A-216ENST00000635742 F8WDY8 70 aa7.41□□□□□ -1.22
CACNA1A-216ENST00000635742 GPX1P07203 203 aa7.41□□□□□ -1.22
CACNA1A-216ENST00000635742 LINC00614P0C842 121 aa7.41□□□□□ -1.22
CACNA1A-216ENST00000635742 IGLC6P0CF74 106 aa7.41□□□□□ -1.22
CACNA1A-216ENST00000635742 RNASE4P34096 147 aaKnown RBP7.41□□□□□ -1.22
CACNA1A-216ENST00000635742 CAMPP49913 170 aa7.41□□□□□ -1.22
CACNA1A-216ENST00000635742 RPS20P60866 119 aaKnown RBP7.41□□□□□ -1.22
CACNA1A-216ENST00000635742 ODF3L2Q3SX64 289 aa7.41□□□□□ -1.22
CACNA1A-216ENST00000635742 SPATA3Q8NHX4 192 aa7.41□□□□□ -1.22
CACNA1A-216ENST00000635742 ODF3Q96PU9 254 aa7.41□□□□□ -1.22
CACNA1A-216ENST00000635742 SORL1Q92673 2214 aa7.41□□□□□ -1.22
CACNA1A-216ENST00000635742 TRAV21A0A0B4J279 112 aa7.4□□□□□ -1.22
CACNA1A-216ENST00000635742 IGLV1-51P01701 117 aa7.4□□□□□ -1.22
CACNA1A-216ENST00000635742 MT-ND6P03923 174 aa7.4□□□□□ -1.22
CACNA1A-216ENST00000635742 CTRLP40313 264 aa7.4□□□□□ -1.22
CACNA1A-216ENST00000635742 SNRPEP62304 92 aaKnown RBP7.4□□□□□ -1.22
CACNA1A-216ENST00000635742 HBBP68871 147 aa7.4□□□□□ -1.22
CACNA1A-216ENST00000635742 KRTAP24-1Q3LI83 254 aa7.4□□□□□ -1.22
CACNA1A-216ENST00000635742 COX19Q49B96 90 aa7.4□□□□□ -1.22
CACNA1A-216ENST00000635742 Q6AWC8 147 aa7.4□□□□□ -1.22
CACNA1A-216ENST00000635742 RASL11AQ6T310 242 aa7.4□□□□□ -1.22
CACNA1A-216ENST00000635742 LYZL1Q6UWQ5 148 aa7.4□□□□□ -1.22
CACNA1A-216ENST00000635742 AMTNQ6UX39 209 aa7.4□□□□□ -1.22
CACNA1A-216ENST00000635742 SSBP4Q9BWG4 385 aaPredicted RBP7.4□□□□□ -1.22
CACNA1A-216ENST00000635742 MUC21A0A0G2JKD1 596 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 MUC21A0A140T8X8 626 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 A0A1B0GUT8 65 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 RBMY1BA6NDE4 496 aaKnown RBP7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 RBMY1EA6NEQ0 496 aaKnown RBP7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 C5orf52A6NGY3 159 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 M0R2Z0 102 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 DUSP14O95147 198 aaKnown RBP7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 HLA-DQA1P01909 254 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 RBMY1DP0C7P1 496 aaKnown RBP7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 SMIM6P0DI80 62 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 HLA-DRB4P13762 266 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 LEPP41159 167 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 NDUFA6P56556 154 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 DEFA6Q01524 100 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 SPINK13Q1W4C9 94 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 MUC21Q5SSG8 566 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 FER1L6-AS1Q8NA97 138 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 PGPEP1Q9NXJ5 209 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 HLA-DRB4X5D2U9 266 aa7.4□□□□□ -1.23
CACNA1A-216ENST00000635742 TRAV12-2A0A075B6T6 113 aa7.39□□□□□ -1.23
CACNA1A-216ENST00000635742 A8MTW9 85 aa7.39□□□□□ -1.23
CACNA1A-216ENST00000635742 H3BMM0 161 aa7.39□□□□□ -1.23
CACNA1A-216ENST00000635742 KIAA1644Q3SXP7 199 aa7.39□□□□□ -1.23
CACNA1A-216ENST00000635742 ANXA2RQ3ZCQ2 193 aa7.39□□□□□ -1.23
CACNA1A-216ENST00000635742 GFI1BQ5VTD9 330 aa7.39□□□□□ -1.23
CACNA1A-216ENST00000635742 FXYD7P58549 80 aa7.39□□□□□ -1.23
CACNA1A-216ENST00000635742 C2orf88Q9BSF0 95 aa7.39□□□□□ -1.23
CACNA1A-216ENST00000635742 JMJD1CQ15652 2540 aa7.38□□□□□ -1.23
CACNA1A-216ENST00000635742 TRAV12-3A0A0B4J271 114 aa7.38□□□□□ -1.23
CACNA1A-216ENST00000635742 C7orf71A4D174 169 aa7.38□□□□□ -1.23
CACNA1A-216ENST00000635742 APCSP02743 223 aa7.38□□□□□ -1.23
CACNA1A-216ENST00000635742 AKR1D1P51857 326 aa7.38□□□□□ -1.23
CACNA1A-216ENST00000635742 RIGQ13278 110 aa7.38□□□□□ -1.23
CACNA1A-216ENST00000635742 BORCS7Q96B45 105 aa7.38□□□□□ -1.23
CACNA1A-216ENST00000635742 TEP1Q99973 2627 aaKnown RBP7.38□□□□□ -1.23
CACNA1A-216ENST00000635742 H3BVH4 76 aa7.37□□□□□ -1.23
CACNA1A-216ENST00000635742 PRIMA1Q86XR5 153 aa7.37□□□□□ -1.23
CACNA1A-216ENST00000635742 GATD1Q8NB37 220 aa7.37□□□□□ -1.23
CACNA1A-216ENST00000635742 OR2K2Q8NGT1 345 aa7.37□□□□□ -1.23
CACNA1A-216ENST00000635742 OR11H12B2RN74 326 aa7.37□□□□□ -1.23
CACNA1A-216ENST00000635742 ZNF324O75467 553 aaPredicted RBP7.37□□□□□ -1.23
CACNA1A-216ENST00000635742 CD7P09564 240 aa7.37□□□□□ -1.23
CACNA1A-216ENST00000635742 RBMY1A1P0DJD3 496 aaKnown RBP7.37□□□□□ -1.23
CACNA1A-216ENST00000635742 RBMY1CP0DJD4 496 aa7.37□□□□□ -1.23
CACNA1A-216ENST00000635742 TSPOP30536 169 aa7.37□□□□□ -1.23
CACNA1A-216ENST00000635742 RBX1P62877 108 aa7.37□□□□□ -1.23
CACNA1A-216ENST00000635742 RBMY1FQ15415 496 aaKnown RBP7.37□□□□□ -1.23
CACNA1A-216ENST00000635742 CNFNQ9BYD5 112 aa7.37□□□□□ -1.23
CACNA1A-216ENST00000635742 CRXO43186 299 aaPredicted RBP7.36□□□□□ -1.23
CACNA1A-216ENST00000635742 GNRH2O43555 120 aa7.36□□□□□ -1.23
CACNA1A-216ENST00000635742 SNAI2O43623 268 aa7.36□□□□□ -1.23
CACNA1A-216ENST00000635742 SRIP30626 198 aa7.36□□□□□ -1.23
CACNA1A-216ENST00000635742 OR10AG1Q8NH19 301 aa7.36□□□□□ -1.23
CACNA1A-216ENST00000635742 WFDC10AQ9H1F0 79 aa7.36□□□□□ -1.23
CACNA1A-216ENST00000635742 MSRB1Q9NZV6 116 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms