RNA–Protein interactions for RNA: ENST00000624700.3

CDKL5-207, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 564 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-207ENST00000624700 KIF21AQ7Z4S6 1674 aa0.6□□□□□ -2.31
CDKL5-207ENST00000624700 RER1O15258 196 aa0.6□□□□□ -2.31
CDKL5-207ENST00000624700 SPTBP11277 2137 aa0.6□□□□□ -2.31
CDKL5-207ENST00000624700 TMBIM6P55061 237 aa0.6□□□□□ -2.31
CDKL5-207ENST00000624700 FXYD6P3P58550 94 aa0.6□□□□□ -2.31
CDKL5-207ENST00000624700 TMEM14EPQ6UXP3 125 aa0.6□□□□□ -2.31
CDKL5-207ENST00000624700 CROCCP2Q86T23 111 aa0.6□□□□□ -2.31
CDKL5-207ENST00000624700 EXOC3-AS1Q8N2X6 119 aa0.6□□□□□ -2.31
CDKL5-207ENST00000624700 WFDC10AQ9H1F0 79 aa0.6□□□□□ -2.31
CDKL5-207ENST00000624700 LAMTOR3Q9UHA4 124 aa0.6□□□□□ -2.31
CDKL5-207ENST00000624700 EEA1Q15075 1411 aa0.6□□□□□ -2.31
CDKL5-207ENST00000624700 LAMC3Q9Y6N6 1575 aa0.6□□□□□ -2.31
CDKL5-207ENST00000624700 NUP188Q5SRE5 1749 aa0.6□□□□□ -2.31
CDKL5-207ENST00000624700 PREX2Q70Z35 1606 aa0.6□□□□□ -2.31
CDKL5-207ENST00000624700 ROBO1Q9Y6N7 1651 aa0.59□□□□□ -2.31
CDKL5-207ENST00000624700 EPRSP07814 1512 aaKnown RBP0.59□□□□□ -2.31
CDKL5-207ENST00000624700 LRP1BQ9NZR2 4599 aa0.59□□□□□ -2.31
CDKL5-207ENST00000624700 PKHD1P08F94 4074 aa0.59□□□□□ -2.31
CDKL5-207ENST00000624700 KIAA1107Q9UPP5 1409 aa0.59□□□□□ -2.31
CDKL5-207ENST00000624700 A0A096LPI6 279 aa0.59□□□□□ -2.31
CDKL5-207ENST00000624700 K7EIL1 84 aa0.59□□□□□ -2.31
CDKL5-207ENST00000624700 PIAS1O75925 651 aa0.59□□□□□ -2.31
CDKL5-207ENST00000624700 CXCL1P09341 107 aa0.59□□□□□ -2.31
CDKL5-207ENST00000624700 PPP1R2P41236 205 aa0.59□□□□□ -2.31
CDKL5-207ENST00000624700 RPL35P42766 123 aaKnown RBP0.59□□□□□ -2.31
CDKL5-207ENST00000624700 INSL3P51460 131 aa0.59□□□□□ -2.31
CDKL5-207ENST00000624700 Q6ZS92 163 aa0.59□□□□□ -2.31
CDKL5-207ENST00000624700 ATOH7Q8N100 152 aa0.59□□□□□ -2.31
CDKL5-207ENST00000624700 NEK7Q8TDX7 302 aa0.59□□□□□ -2.31
CDKL5-207ENST00000624700 MCEEQ96PE7 176 aa0.59□□□□□ -2.31
CDKL5-207ENST00000624700 OR2H1Q9GZK4 316 aa0.59□□□□□ -2.31
CDKL5-207ENST00000624700 TCOF1Q13428 1488 aaKnown RBP0.59□□□□□ -2.32
CDKL5-207ENST00000624700 HECTD4Q9Y4D8 3996 aa0.59□□□□□ -2.32
CDKL5-207ENST00000624700 DYNC2H1Q8NCM8 4307 aaKnown RBP0.58□□□□□ -2.32
CDKL5-207ENST00000624700 DNAH1Q9P2D7 4330 aa0.58□□□□□ -2.32
CDKL5-207ENST00000624700 ADCY10Q96PN6 1610 aa0.58□□□□□ -2.32
CDKL5-207ENST00000624700 RNF17Q9BXT8 1623 aaKnown RBP0.58□□□□□ -2.32
CDKL5-207ENST00000624700 PHGR1C9JFL3 82 aa0.58□□□□□ -2.32
CDKL5-207ENST00000624700 SNCBQ16143 134 aa0.58□□□□□ -2.32
CDKL5-207ENST00000624700 C1orf140Q5VVS0 124 aa0.58□□□□□ -2.32
CDKL5-207ENST00000624700 AHCTF1Q8WYP5 2266 aa0.58□□□□□ -2.32
CDKL5-207ENST00000624700 TJP1Q07157 1748 aa0.58□□□□□ -2.32
CDKL5-207ENST00000624700 LRP1Q07954 4544 aaKnown RBP0.57□□□□□ -2.32
CDKL5-207ENST00000624700 NRXN1Q9ULB1 1477 aa0.57□□□□□ -2.32
CDKL5-207ENST00000624700 CST7O76096 145 aa0.57□□□□□ -2.32
CDKL5-207ENST00000624700 IGHV3-33P01772 117 aa0.57□□□□□ -2.32
CDKL5-207ENST00000624700 IDO1P14902 403 aa0.57□□□□□ -2.32
CDKL5-207ENST00000624700 ASIPP42127 132 aa0.57□□□□□ -2.32
CDKL5-207ENST00000624700 TCTAP57738 103 aa0.57□□□□□ -2.32
CDKL5-207ENST00000624700 BASP1P80723 227 aaKnown RBP0.57□□□□□ -2.32
CDKL5-207ENST00000624700 FKBP1CQ5VVH2 108 aa0.57□□□□□ -2.32
CDKL5-207ENST00000624700 PHF5AQ7RTV0 110 aaKnown RBP0.57□□□□□ -2.32
CDKL5-207ENST00000624700 FAM216BQ8N7L0 139 aa0.57□□□□□ -2.32
CDKL5-207ENST00000624700 PLEKHB2Q96CS7 222 aa0.57□□□□□ -2.32
CDKL5-207ENST00000624700 MAP3K1Q13233 1512 aa0.57□□□□□ -2.32
CDKL5-207ENST00000624700 RTL9Q8NET4 1388 aa0.57□□□□□ -2.32
CDKL5-207ENST00000624700 AKAP9Q99996 3911 aa0.57□□□□□ -2.32
CDKL5-207ENST00000624700 DISP2A7MBM2 1401 aa0.56□□□□□ -2.32
CDKL5-207ENST00000624700 C10orf71Q711Q0 1435 aa0.56□□□□□ -2.32
CDKL5-207ENST00000624700 PKD1P98161 4303 aa0.56□□□□□ -2.32
CDKL5-207ENST00000624700 CSMD3Q7Z407 3707 aa0.56□□□□□ -2.32
CDKL5-207ENST00000624700 CDK13Q14004 1512 aaKnown RBP0.56□□□□□ -2.32
CDKL5-207ENST00000624700 KIAA0586Q9BVV6 1533 aa0.56□□□□□ -2.32
CDKL5-207ENST00000624700 TRAV23DV6A0A075B6W5 121 aa0.56□□□□□ -2.32
CDKL5-207ENST00000624700 C9orf170A2RU37 121 aa0.56□□□□□ -2.32
CDKL5-207ENST00000624700 K7ERJ3 54 aa0.56□□□□□ -2.32
CDKL5-207ENST00000624700 GNG3P63215 75 aa0.56□□□□□ -2.32
CDKL5-207ENST00000624700 HBBP68871 147 aa0.56□□□□□ -2.32
CDKL5-207ENST00000624700 EIF3IQ13347 325 aaKnown RBP0.56□□□□□ -2.32
CDKL5-207ENST00000624700 GLIPR1L1Q6UWM5 242 aa0.56□□□□□ -2.32
CDKL5-207ENST00000624700 AP3S1Q92572 193 aa0.56□□□□□ -2.32
CDKL5-207ENST00000624700 CST11Q9H112 138 aa0.56□□□□□ -2.32
CDKL5-207ENST00000624700 BOKQ9UMX3 212 aaPredicted RBP0.56□□□□□ -2.32
CDKL5-207ENST00000624700 KIAA1549LQ6ZVL6 1849 aa0.56□□□□□ -2.32
CDKL5-207ENST00000624700 SYNMO15061 1565 aa0.56□□□□□ -2.32
CDKL5-207ENST00000624700 ZC3H13Q5T200 1668 aaKnown RBP0.56□□□□□ -2.32
CDKL5-207ENST00000624700 SACSQ9NZJ4 4579 aa0.55□□□□□ -2.32
CDKL5-207ENST00000624700 FRAS1Q86XX4 4008 aa0.55□□□□□ -2.32
CDKL5-207ENST00000624700 WDR7Q9Y4E6 1490 aa0.55□□□□□ -2.32
CDKL5-207ENST00000624700 NUP210Q8TEM1 1887 aaPredicted RBP0.55□□□□□ -2.32
CDKL5-207ENST00000624700 TRBV30A0A0K0K1B3 111 aa0.55□□□□□ -2.32
CDKL5-207ENST00000624700 RTL8BQ17RB0 113 aa0.55□□□□□ -2.32
CDKL5-207ENST00000624700 SS18L2Q9UHA2 77 aa0.55□□□□□ -2.32
CDKL5-207ENST00000624700 JPT1Q9UK76 154 aa0.55□□□□□ -2.32
CDKL5-207ENST00000624700 DNAH7Q8WXX0 4024 aa0.55□□□□□ -2.32
CDKL5-207ENST00000624700 ROCK1Q13464 1354 aa0.55□□□□□ -2.32
CDKL5-207ENST00000624700 MARF1Q9Y4F3 1742 aaKnown RBP0.55□□□□□ -2.32
CDKL5-207ENST00000624700 HRNRQ86YZ3 2850 aaPredicted RBP0.55□□□□□ -2.32
CDKL5-207ENST00000624700 RREB1Q92766 1687 aa0.54□□□□□ -2.32
CDKL5-207ENST00000624700 C5orf67F2Z3F1 127 aa0.54□□□□□ -2.32
CDKL5-207ENST00000624700 H3BQV1 296 aa0.54□□□□□ -2.32
CDKL5-207ENST00000624700 Q6ZQY7 126 aa0.54□□□□□ -2.32
CDKL5-207ENST00000624700 PLAC8Q9NZF1 115 aa0.54□□□□□ -2.32
CDKL5-207ENST00000624700 TNS1Q9HBL0 1735 aaKnown RBP0.54□□□□□ -2.32
CDKL5-207ENST00000624700 BCL9O00512 1426 aa0.54□□□□□ -2.32
CDKL5-207ENST00000624700 TRAPPC8Q9Y2L5 1435 aa0.54□□□□□ -2.32
CDKL5-207ENST00000624700 HSPG2P98160 4391 aa0.54□□□□□ -2.32
CDKL5-207ENST00000624700 A2MP01023 1474 aa0.54□□□□□ -2.32
CDKL5-207ENST00000624700 ADGRB1O14514 1584 aa0.53□□□□□ -2.32
CDKL5-207ENST00000624700 PKDREJQ9NTG1 2253 aa0.53□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms