RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 SS18Q15532 418 aa7.07□□□□□ -1.28
VCL-206ENST00000623461 ZNF672Q499Z4 452 aaPredicted RBP7.07□□□□□ -1.28
VCL-206ENST00000623461 LENEPQ9Y5L5 61 aa7.07□□□□□ -1.28
VCL-206ENST00000623461 RHPN1-AS1Q9BWJ2 59 aa7.06□□□□□ -1.28
VCL-206ENST00000623461 WISP1O95388 367 aa7.06□□□□□ -1.28
VCL-206ENST00000623461 KRTAP27-1Q3LI81 207 aa7.06□□□□□ -1.28
VCL-206ENST00000623461 C8orf31Q8N9H6 132 aa7.06□□□□□ -1.28
VCL-206ENST00000623461 ICOSQ9Y6W8 199 aa7.06□□□□□ -1.28
VCL-206ENST00000623461 E9PLD3 99 aa7.06□□□□□ -1.28
VCL-206ENST00000623461 C5orf47Q569G3 176 aa7.06□□□□□ -1.28
VCL-206ENST00000623461 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.06□□□□□ -1.28
VCL-206ENST00000623461 ZNF134P52741 427 aa7.06□□□□□ -1.28
VCL-206ENST00000623461 C2orf16Q68DN1 1984 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 INSP01308 110 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 DEFB121Q5J5C9 76 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 GTSF1Q8WW33 167 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 DSCR8Q96T75 97 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 DAZ1Q9NQZ3 744 aaKnown RBP7.05□□□□□ -1.28
VCL-206ENST00000623461 NBASA2RRP1 2371 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 CREBBPQ92793 2442 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 MBD3L4A6NDZ8 208 aaPredicted RBP7.05□□□□□ -1.28
VCL-206ENST00000623461 MBD3L3A6NE82 208 aaPredicted RBP7.05□□□□□ -1.28
VCL-206ENST00000623461 MBD3L5A6NJ08 208 aaPredicted RBP7.05□□□□□ -1.28
VCL-206ENST00000623461 IGHG3P01860 377 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 HAMPP81172 84 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 MBD3L2Q8NHZ7 208 aaPredicted RBP7.05□□□□□ -1.28
VCL-206ENST00000623461 TMEM243Q9BU79 118 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 SPANXB1Q9NS25 103 aaPredicted RBP7.05□□□□□ -1.28
VCL-206ENST00000623461 CD59P13987 128 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 HERV-K104P63124 156 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 ZNF491Q8N8L2 437 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 F8WEM9 126 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 GP9P14770 177 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 HTN3P15516 51 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 GATA3P23771 443 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 NDUFV3P56181 108 aaKnown RBP7.05□□□□□ -1.28
VCL-206ENST00000623461 TEX36Q5VZQ5 186 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 RMI2Q96E14 147 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 LYNX1G3V0Z9 82 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 LYNX1P0DP58 116 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 DUX4L9Q6RFH8 374 aaPredicted RBP7.05□□□□□ -1.28
VCL-206ENST00000623461 LYPD2Q6UXB3 125 aa7.05□□□□□ -1.28
VCL-206ENST00000623461 FREM1Q5H8C1 2179 aa7.04□□□□□ -1.28
VCL-206ENST00000623461 THSD7BQ9C0I4 1608 aa7.04□□□□□ -1.28
VCL-206ENST00000623461 TRGV1A0A0A0MS02 117 aa7.04□□□□□ -1.28
VCL-206ENST00000623461 ZMAT4Q9H898 229 aa7.04□□□□□ -1.28
VCL-206ENST00000623461 A0A1B0GX51 115 aa7.04□□□□□ -1.28
VCL-206ENST00000623461 KNCNA6PVL3 124 aa7.04□□□□□ -1.28
VCL-206ENST00000623461 IGHV1OR15-1A0A075B7D0 117 aa7.04□□□□□ -1.28
VCL-206ENST00000623461 DKK1O94907 266 aa7.04□□□□□ -1.28
VCL-206ENST00000623461 Q6ZR03 302 aa7.04□□□□□ -1.28
VCL-206ENST00000623461 A4D1N5 150 aa7.04□□□□□ -1.28
VCL-206ENST00000623461 ODF1Q14990 250 aa7.04□□□□□ -1.28
VCL-206ENST00000623461 FAM167A-AS1Q96KT0 104 aa7.04□□□□□ -1.28
VCL-206ENST00000623461 ZNRD1Q9P1U0 126 aa7.04□□□□□ -1.28
VCL-206ENST00000623461 A0A1B0GXF2 115 aa7.03□□□□□ -1.28
VCL-206ENST00000623461 ORMDL1Q9P0S3 153 aa7.03□□□□□ -1.28
VCL-206ENST00000623461 COL4A6Q14031 1691 aa7.03□□□□□ -1.28
VCL-206ENST00000623461 EML6Q6ZMW3 1958 aa7.03□□□□□ -1.28
VCL-206ENST00000623461 MUSTN1Q8IVN3 82 aa7.03□□□□□ -1.28
VCL-206ENST00000623461 IGFBPL1Q8WX77 278 aa7.03□□□□□ -1.28
VCL-206ENST00000623461 PROK2Q9HC23 129 aa7.03□□□□□ -1.28
VCL-206ENST00000623461 CFHR4Q92496 578 aa7.03□□□□□ -1.28
VCL-206ENST00000623461 TOMM6Q96B49 74 aa7.03□□□□□ -1.28
VCL-206ENST00000623461 TNRC6AQ8NDV7 1962 aaKnown RBP7.03□□□□□ -1.28
VCL-206ENST00000623461 H0YGX0 51 aa7.02□□□□□ -1.28
VCL-206ENST00000623461 NDUFA4O00483 81 aa7.02□□□□□ -1.29
VCL-206ENST00000623461 LINC00643Q86TS7 51 aa7.02□□□□□ -1.29
VCL-206ENST00000623461 C22orf46C9J442 243 aa7.02□□□□□ -1.29
VCL-206ENST00000623461 INS-IGF2F8WCM5 200 aa7.02□□□□□ -1.29
VCL-206ENST00000623461 C19orf71A6NCJ1 209 aa7.02□□□□□ -1.29
VCL-206ENST00000623461 CRLF1O75462 422 aa7.02□□□□□ -1.29
VCL-206ENST00000623461 TM2D2Q9BX73 214 aa7.02□□□□□ -1.29
VCL-206ENST00000623461 C17orf77Q96MU5 243 aa7.02□□□□□ -1.29
VCL-206ENST00000623461 C11orf86A6NJI1 115 aa7.01□□□□□ -1.29
VCL-206ENST00000623461 UQCRQO14949 82 aa7.01□□□□□ -1.29
VCL-206ENST00000623461 LTBRP36941 435 aa7.01□□□□□ -1.29
VCL-206ENST00000623461 LINC00527Q9UJ94 153 aa7.01□□□□□ -1.29
VCL-206ENST00000623461 H3BQ85 93 aa7.01□□□□□ -1.29
VCL-206ENST00000623461 MT-ATP8P03928 68 aa7.01□□□□□ -1.29
VCL-206ENST00000623461 FRMD6-AS1P0C7T7 363 aa7.01□□□□□ -1.29
VCL-206ENST00000623461 PATE2Q6UY27 113 aa7.01□□□□□ -1.29
VCL-206ENST00000623461 TPSG1Q9NRR2 321 aa7.01□□□□□ -1.29
VCL-206ENST00000623461 TINCRA0A1B0GVN0 87 aa7.01□□□□□ -1.29
VCL-206ENST00000623461 DYNAPQ8N1N2 210 aa7.01□□□□□ -1.29
VCL-206ENST00000623461 ZNF503-AS2A6NEH8 195 aa7□□□□□ -1.29
VCL-206ENST00000623461 B4DSR2 109 aa7□□□□□ -1.29
VCL-206ENST00000623461 USF3Q68DE3 2245 aa7□□□□□ -1.29
VCL-206ENST00000623461 F6UB75 175 aa7□□□□□ -1.29
VCL-206ENST00000623461 IGLV1-44P01699 117 aa7□□□□□ -1.29
VCL-206ENST00000623461 GATA1P15976 413 aaPredicted RBP7□□□□□ -1.29
VCL-206ENST00000623461 SPATA25Q9BR10 227 aa7□□□□□ -1.29
VCL-206ENST00000623461 NDUFA11Q86Y39 141 aa7□□□□□ -1.29
VCL-206ENST00000623461 BAALCQ8WXS3 180 aa7□□□□□ -1.29
VCL-206ENST00000623461 ATP6V0E1O15342 81 aa7□□□□□ -1.29
VCL-206ENST00000623461 TMEM219Q86XT9 240 aa7□□□□□ -1.29
VCL-206ENST00000623461 IGHG2P01859 326 aa6.99□□□□□ -1.29
VCL-206ENST00000623461 AGPAT4-IT1Q9H0P7 198 aa6.99□□□□□ -1.29
VCL-206ENST00000623461 TP53TG3Q9ULZ0 132 aa6.99□□□□□ -1.29
VCL-206ENST00000623461 IGLV2-14P01704 120 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms