RNA–Protein interactions for RNA: ENST00000622098.4

CDK16-223, Transcript of cyclin dependent kinase 16, human

TSL 2 BASIC

Gene CDK16, Length 2,968 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK16-223	ENST00000622098		A0A1W2PPM0	123 aa		13.51	□□□□□ -0.25
CDK16-223	ENST00000622098	TRBV12-3	P01733	135 aa		13.51	□□□□□ -0.25
CDK16-223	ENST00000622098	ARL3	P36405	182 aa		13.51	□□□□□ -0.25
CDK16-223	ENST00000622098	MOB4	Q9Y3A3	225 aa		13.51	□□□□□ -0.25
CDK16-223	ENST00000622098	IGHV4-4	A0A075B6R2	117 aa		13.51	□□□□□ -0.25
CDK16-223	ENST00000622098	DEFB1	P60022	68 aa		13.51	□□□□□ -0.25
CDK16-223	ENST00000622098	HIGD1B	Q9P298	99 aa		13.51	□□□□□ -0.25
CDK16-223	ENST00000622098	COL12A1	Q99715	3063 aa		13.51	□□□□□ -0.25
CDK16-223	ENST00000622098	BRD3OS	Q6XYD6	125 aa		13.5	□□□□□ -0.25
CDK16-223	ENST00000622098	C9orf139	Q6ZV77	190 aa		13.5	□□□□□ -0.25
CDK16-223	ENST00000622098	SPCS1	Q9Y6A9	102 aa		13.5	□□□□□ -0.25
CDK16-223	ENST00000622098	PRSS47	A8MTI9	375 aa		13.5	□□□□□ -0.25
CDK16-223	ENST00000622098		M0R381	172 aa		13.5	□□□□□ -0.25
CDK16-223	ENST00000622098	SMIM13	P0DJ93	91 aa		13.5	□□□□□ -0.25
CDK16-223	ENST00000622098	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
CDK16-223	ENST00000622098	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.5	□□□□□ -0.25
CDK16-223	ENST00000622098	FAM223B	A6NKX1	122 aa		13.5	□□□□□ -0.25
CDK16-223	ENST00000622098	FAM223A	Q8IWN6	122 aa		13.5	□□□□□ -0.25
CDK16-223	ENST00000622098	ABCA2	Q9BZC7	2435 aa		13.49	□□□□□ -0.25
CDK16-223	ENST00000622098	MAP1A	P78559	2803 aa	Predicted RBP	13.49	□□□□□ -0.25
CDK16-223	ENST00000622098		K7ERJ3	54 aa		13.49	□□□□□ -0.25
CDK16-223	ENST00000622098	GPHB5	Q86YW7	130 aa		13.49	□□□□□ -0.25
CDK16-223	ENST00000622098	C19orf54	Q5BKX5	351 aa		13.48	□□□□□ -0.25
CDK16-223	ENST00000622098	KLK15	Q9H2R5	256 aa		13.48	□□□□□ -0.25
CDK16-223	ENST00000622098	LY6D	Q14210	128 aa		13.48	□□□□□ -0.25
CDK16-223	ENST00000622098	SAMD5	Q5TGI4	173 aa		13.48	□□□□□ -0.25
CDK16-223	ENST00000622098	SMIM2	Q9BVW6	85 aa		13.48	□□□□□ -0.25
CDK16-223	ENST00000622098	MEGF9	Q9H1U4	602 aa		13.48	□□□□□ -0.25
CDK16-223	ENST00000622098		A0A087WX48	190 aa		13.47	□□□□□ -0.25
CDK16-223	ENST00000622098		K7EMI3	77 aa		13.47	□□□□□ -0.25
CDK16-223	ENST00000622098	FABP2	P12104	132 aa		13.47	□□□□□ -0.25
CDK16-223	ENST00000622098	RPL11	P62913	178 aa	Known RBP	13.47	□□□□□ -0.25
CDK16-223	ENST00000622098	ZFAND2A	Q8N6M9	145 aa		13.47	□□□□□ -0.25
CDK16-223	ENST00000622098	MRAP2	Q96G30	205 aa		13.47	□□□□□ -0.25
CDK16-223	ENST00000622098	S100A4	P26447	101 aa	Known RBP	13.47	□□□□□ -0.25
CDK16-223	ENST00000622098	MAPKAPK5-AS1	Q8N8E1	139 aa		13.47	□□□□□ -0.25
CDK16-223	ENST00000622098	OR10J6P	Q8NGY7	276 aa		13.47	□□□□□ -0.25
CDK16-223	ENST00000622098	LENEP	Q9Y5L5	61 aa		13.47	□□□□□ -0.25
CDK16-223	ENST00000622098	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	13.47	□□□□□ -0.25
CDK16-223	ENST00000622098	IGKV3-7	A0A075B6H7	116 aa		13.46	□□□□□ -0.25
CDK16-223	ENST00000622098	IGHV3-11	P01762	117 aa		13.46	□□□□□ -0.25
CDK16-223	ENST00000622098	LINC00477	Q96M19	166 aa		13.46	□□□□□ -0.25
CDK16-223	ENST00000622098	NHP2	Q9NX24	153 aa	Known RBP	13.46	□□□□□ -0.25
CDK16-223	ENST00000622098	C14orf178	Q8N769	122 aa	Predicted RBP	13.46	□□□□□ -0.26
CDK16-223	ENST00000622098	C19orf84	I3L1E1	186 aa		13.45	□□□□□ -0.26
CDK16-223	ENST00000622098	LY6E	Q16553	131 aa		13.45	□□□□□ -0.26
CDK16-223	ENST00000622098	OR5A1	Q8NGJ0	315 aa		13.45	□□□□□ -0.26
CDK16-223	ENST00000622098	ATP6V0B	Q99437	205 aa		13.45	□□□□□ -0.26
CDK16-223	ENST00000622098	TRAV21	A0A0B4J279	112 aa		13.45	□□□□□ -0.26
CDK16-223	ENST00000622098	IGHV1-69D	A0A0B4J2H0	117 aa		13.45	□□□□□ -0.26
CDK16-223	ENST00000622098		F6UB75	175 aa		13.45	□□□□□ -0.26
CDK16-223	ENST00000622098	IGHV1-69	P01742	117 aa		13.45	□□□□□ -0.26
CDK16-223	ENST00000622098	CEND1	Q8N111	149 aa		13.45	□□□□□ -0.26
CDK16-223	ENST00000622098	PHLDA3	Q9Y5J5	127 aa		13.45	□□□□□ -0.26
CDK16-223	ENST00000622098	IGHV4-39	P01824	125 aa		13.44	□□□□□ -0.26
CDK16-223	ENST00000622098	SUMO2	P61956	95 aa	Known RBP	13.44	□□□□□ -0.26
CDK16-223	ENST00000622098	COTL1	Q14019	142 aa		13.44	□□□□□ -0.26
CDK16-223	ENST00000622098	RASL10A	Q92737	203 aa		13.44	□□□□□ -0.26
CDK16-223	ENST00000622098	RPL39L	Q96EH5	51 aa	Known RBP	13.44	□□□□□ -0.26
CDK16-223	ENST00000622098	NDUFA4	O00483	81 aa		13.44	□□□□□ -0.26
CDK16-223	ENST00000622098	PLN	P26678	52 aa		13.44	□□□□□ -0.26
CDK16-223	ENST00000622098	SOCS3	O14543	225 aa		13.44	□□□□□ -0.26
CDK16-223	ENST00000622098	RNASE4	P34096	147 aa	Known RBP	13.44	□□□□□ -0.26
CDK16-223	ENST00000622098	ASIP	P42127	132 aa		13.44	□□□□□ -0.26
CDK16-223	ENST00000622098	ANXA2R	Q3ZCQ2	193 aa		13.44	□□□□□ -0.26
CDK16-223	ENST00000622098	TM2D2	Q9BX73	214 aa		13.44	□□□□□ -0.26
CDK16-223	ENST00000622098	AGRN	O00468	2067 aa		13.44	□□□□□ -0.26
CDK16-223	ENST00000622098	OVOL1	O14753	267 aa		13.43	□□□□□ -0.26
CDK16-223	ENST00000622098	HLA-DRB4	P13762	266 aa		13.43	□□□□□ -0.26
CDK16-223	ENST00000622098	HLA-DRB4	X5D2U9	266 aa		13.43	□□□□□ -0.26
CDK16-223	ENST00000622098	MGP	P08493	103 aa		13.43	□□□□□ -0.26
CDK16-223	ENST00000622098	CRIP2	P52943	208 aa	Predicted RBP	13.43	□□□□□ -0.26
CDK16-223	ENST00000622098	SCGB3A1	Q96QR1	104 aa		13.43	□□□□□ -0.26
CDK16-223	ENST00000622098	DPH3P1	Q9H4G8	78 aa		13.43	□□□□□ -0.26
CDK16-223	ENST00000622098		F8VRH5	84 aa		13.42	□□□□□ -0.26
CDK16-223	ENST00000622098	ORMDL2	Q53FV1	153 aa		13.42	□□□□□ -0.26
CDK16-223	ENST00000622098	LCNL1	Q6ZST4	164 aa		13.42	□□□□□ -0.26
CDK16-223	ENST00000622098	PHLDA1	Q8WV24	401 aa	Predicted RBP	13.42	□□□□□ -0.26
CDK16-223	ENST00000622098		H7C1H1	209 aa		13.42	□□□□□ -0.26
CDK16-223	ENST00000622098	GNRH2	O43555	120 aa		13.41	□□□□□ -0.26
CDK16-223	ENST00000622098	SPG11	Q96JI7	2443 aa		13.41	□□□□□ -0.26
CDK16-223	ENST00000622098	IGHV4-38-2	P0DP08	117 aa		13.41	□□□□□ -0.26
CDK16-223	ENST00000622098	NEGR1	Q7Z3B1	354 aa		13.41	□□□□□ -0.26
CDK16-223	ENST00000622098	PF4V1	P10720	104 aa		13.41	□□□□□ -0.26
CDK16-223	ENST00000622098	RIPPLY3	P57055	190 aa		13.41	□□□□□ -0.26
CDK16-223	ENST00000622098	TOMM6	Q96B49	74 aa		13.41	□□□□□ -0.26
CDK16-223	ENST00000622098	CHTOP	Q9Y3Y2	248 aa	Known RBP	13.41	□□□□□ -0.26
CDK16-223	ENST00000622098	ITPR1	Q14643	2758 aa		13.4	□□□□□ -0.26
CDK16-223	ENST00000622098	C20orf78	Q9BR46	151 aa		13.4	□□□□□ -0.26
CDK16-223	ENST00000622098	TRAV12-1	A0A0B4J245	112 aa		13.4	□□□□□ -0.26
CDK16-223	ENST00000622098	IGHV4-61	A0A0C4DH41	118 aa		13.4	□□□□□ -0.26
CDK16-223	ENST00000622098	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	13.39	□□□□□ -0.27	9e-7	■■□□□ 14.4
CDK16-223	ENST00000622098		G3V4G9	280 aa		13.39	□□□□□ -0.27
CDK16-223	ENST00000622098	HIST1H4G	Q99525	98 aa		13.39	□□□□□ -0.27
CDK16-223	ENST00000622098		H3BUX3	64 aa		13.39	□□□□□ -0.27
CDK16-223	ENST00000622098	SRD5A1	P18405	259 aa		13.39	□□□□□ -0.27
CDK16-223	ENST00000622098	CSTL1	Q9H114	145 aa		13.39	□□□□□ -0.27
CDK16-223	ENST00000622098	BLCAP	P62952	87 aa		13.38	□□□□□ -0.27
CDK16-223	ENST00000622098	USMG5	Q96IX5	58 aa		13.38	□□□□□ -0.27
CDK16-223	ENST00000622098	SPOCK3	Q9BQ16	436 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms