RNA–Protein interactions for RNA: ENST00000614616.4

CHD1-212, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD1, Length 8,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-212ENST00000614616 PKIGQ9Y2B9 76 aa10.98□□□□□ -0.65
CHD1-212ENST00000614616 TCL1BO95988 128 aa10.98□□□□□ -0.65
CHD1-212ENST00000614616 IGKV1-39P01597 117 aa10.98□□□□□ -0.65
CHD1-212ENST00000614616 IGKV1D-39P04432 117 aa10.98□□□□□ -0.65
CHD1-212ENST00000614616 COLQQ9Y215 455 aaPredicted RBP10.98□□□□□ -0.65
CHD1-212ENST00000614616 THBDP07204 575 aa10.97□□□□□ -0.65
CHD1-212ENST00000614616 DEFB124Q8NES8 71 aa10.97□□□□□ -0.65
CHD1-212ENST00000614616 CSRP1P21291 193 aaKnown RBP10.97□□□□□ -0.65
CHD1-212ENST00000614616 IMUPQ9GZP8 106 aa10.97□□□□□ -0.65
CHD1-212ENST00000614616 U3KQE9 123 aa10.97□□□□□ -0.65
CHD1-212ENST00000614616 E9PLD3 99 aa10.97□□□□□ -0.65
CHD1-212ENST00000614616 H0YGX0 51 aa10.97□□□□□ -0.65
CHD1-212ENST00000614616 CLPSP04118 112 aa10.97□□□□□ -0.65
CHD1-212ENST00000614616 LMO1P25800 156 aa10.97□□□□□ -0.65
CHD1-212ENST00000614616 C20orf173Q96LM9 149 aa10.97□□□□□ -0.65
CHD1-212ENST00000614616 METRNQ9UJH8 293 aa10.97□□□□□ -0.65
CHD1-212ENST00000614616 TRGV1A0A0A0MS02 117 aa10.97□□□□□ -0.65
CHD1-212ENST00000614616 MINOS1Q5TGZ0 78 aa10.97□□□□□ -0.65
CHD1-212ENST00000614616 CCL19Q99731 98 aa10.97□□□□□ -0.65
CHD1-212ENST00000614616 MINOS1-NBL1R4GNA1 71 aa10.97□□□□□ -0.65
CHD1-212ENST00000614616 E9PLN8 166 aa10.97□□□□□ -0.65
CHD1-212ENST00000614616 FAM236DA0A1B0GTK5 79 aa10.96□□□□□ -0.65
CHD1-212ENST00000614616 FAM236CP0DP71 79 aa10.96□□□□□ -0.65
CHD1-212ENST00000614616 YPEL4Q96NS1 127 aa10.96□□□□□ -0.65
CHD1-212ENST00000614616 ODF1Q14990 250 aa10.96□□□□□ -0.65
CHD1-212ENST00000614616 ZNF833PQ6ZTB9 187 aa10.96□□□□□ -0.65
CHD1-212ENST00000614616 SAP25Q8TEE9 199 aa10.96□□□□□ -0.65
CHD1-212ENST00000614616 FAM240AA0A1B0GVK7 77 aa10.96□□□□□ -0.66
CHD1-212ENST00000614616 RBAKDNA6NC62 111 aa10.96□□□□□ -0.66
CHD1-212ENST00000614616 MUSTN1Q8IVN3 82 aa10.95□□□□□ -0.66
CHD1-212ENST00000614616 ETV2O00321 342 aaPredicted RBP10.95□□□□□ -0.66
CHD1-212ENST00000614616 NDUFA11Q86Y39 141 aa10.95□□□□□ -0.66
CHD1-212ENST00000614616 WFDC9Q8NEX5 89 aa10.95□□□□□ -0.66
CHD1-212ENST00000614616 OOSP1A8MZH6 123 aa10.95□□□□□ -0.66
CHD1-212ENST00000614616 TRAV25A0A0B4J276 109 aa10.95□□□□□ -0.66
CHD1-212ENST00000614616 A0A0U1RQV1 116 aa10.95□□□□□ -0.66
CHD1-212ENST00000614616 PFN2P35080 140 aa10.95□□□□□ -0.66
CHD1-212ENST00000614616 VSIG2Q96IQ7 327 aa10.95□□□□□ -0.66
CHD1-212ENST00000614616 IGHV1-46P01743 117 aa10.95□□□□□ -0.66
CHD1-212ENST00000614616 LRRC75A-AS1Q8N1F1 130 aa10.95□□□□□ -0.66
CHD1-212ENST00000614616 ZNF134P52741 427 aa10.94□□□□□ -0.66
CHD1-212ENST00000614616 IGKV1D-17A0A075B6S4 117 aa10.94□□□□□ -0.66
CHD1-212ENST00000614616 CMC4P56277 68 aaPredicted RBP10.94□□□□□ -0.66
CHD1-212ENST00000614616 IGFL4Q6B9Z1 124 aa10.94□□□□□ -0.66
CHD1-212ENST00000614616 PRR20EP86478 221 aa10.94□□□□□ -0.66
CHD1-212ENST00000614616 PRR20CP86479 221 aa10.94□□□□□ -0.66
CHD1-212ENST00000614616 PRR20DP86480 221 aa10.94□□□□□ -0.66
CHD1-212ENST00000614616 PRR20BP86481 221 aa10.94□□□□□ -0.66
CHD1-212ENST00000614616 PRR20AP86496 221 aa10.94□□□□□ -0.66
CHD1-212ENST00000614616 CTRLP40313 264 aa10.94□□□□□ -0.66
CHD1-212ENST00000614616 JMJD7-PLA2G4BH0Y9G9 81 aa10.94□□□□□ -0.66
CHD1-212ENST00000614616 MUC4Q99102 2169 aa10.93□□□□□ -0.66
CHD1-212ENST00000614616 C2orf70A6NJV1 201 aa10.93□□□□□ -0.66
CHD1-212ENST00000614616 C8orf31Q8N9H6 132 aa10.93□□□□□ -0.66
CHD1-212ENST00000614616 BAALCQ8WXS3 180 aa10.93□□□□□ -0.66
CHD1-212ENST00000614616 TMEM178BH3BS89 294 aa10.93□□□□□ -0.66
CHD1-212ENST00000614616 DKK1O94907 266 aa10.93□□□□□ -0.66
CHD1-212ENST00000614616 TOMM6Q96B49 74 aa10.93□□□□□ -0.66
CHD1-212ENST00000614616 IGHV3OR16-10A0A075B7F0 116 aa10.93□□□□□ -0.66
CHD1-212ENST00000614616 NDUFC1O43677 76 aa10.93□□□□□ -0.66
CHD1-212ENST00000614616 GAFA1Q96PS6 74 aa10.93□□□□□ -0.66
CHD1-212ENST00000614616 ZFP36L1Q07352 338 aaKnown RBP10.92□□□□□ -0.66
CHD1-212ENST00000614616 TEX49A0A1B0GTD5 131 aa10.92□□□□□ -0.66
CHD1-212ENST00000614616 IGLC6P0CF74 106 aa10.92□□□□□ -0.66
CHD1-212ENST00000614616 SLC25A29Q8N8R3 303 aa10.92□□□□□ -0.66
CHD1-212ENST00000614616 SPAARA0A1B0GVQ0 90 aa10.91□□□□□ -0.66
CHD1-212ENST00000614616 TM2D2Q9BX73 214 aa10.91□□□□□ -0.66
CHD1-212ENST00000614616 TMEM256-PLSCR3K7ERE1 68 aa10.91□□□□□ -0.66
CHD1-212ENST00000614616 C1orf195Q5TG92 126 aa10.91□□□□□ -0.66
CHD1-212ENST00000614616 EP300Q09472 2414 aaPredicted RBP10.91□□□□□ -0.66
CHD1-212ENST00000614616 MPLKIPQ8TAP9 179 aa10.91□□□□□ -0.66
CHD1-212ENST00000614616 PF4P02776 101 aa10.91□□□□□ -0.66
CHD1-212ENST00000614616 Q8N1Y9 231 aa10.91□□□□□ -0.66
CHD1-212ENST00000614616 COL4A5P29400 1685 aa10.91□□□□□ -0.66
CHD1-212ENST00000614616 FAM27E3Q08E93 113 aa10.91□□□□□ -0.66
CHD1-212ENST00000614616 VMO1Q7Z5L0 202 aa10.91□□□□□ -0.66
CHD1-212ENST00000614616 TMEM61Q8N0U2 210 aa10.91□□□□□ -0.66
CHD1-212ENST00000614616 C9orf106Q8NAJ2 232 aa10.9□□□□□ -0.66
CHD1-212ENST00000614616 SPRR3Q9UBC9 169 aa10.9□□□□□ -0.66
CHD1-212ENST00000614616 RNF152Q8N8N0 203 aa10.9□□□□□ -0.66
CHD1-212ENST00000614616 FDCSPQ8NFU4 85 aa10.9□□□□□ -0.66
CHD1-212ENST00000614616 DAZ1Q9NQZ3 744 aaKnown RBP10.9□□□□□ -0.66
CHD1-212ENST00000614616 C16orf54Q6UWD8 224 aa10.9□□□□□ -0.66
CHD1-212ENST00000614616 ZFP2Q6ZN57 461 aa10.9□□□□□ -0.66
CHD1-212ENST00000614616 Q9H8V8 135 aa10.9□□□□□ -0.66
CHD1-212ENST00000614616 MP68P56378 58 aa10.9□□□□□ -0.67
CHD1-212ENST00000614616 IGLV3-1P01715 115 aa10.89□□□□□ -0.67
CHD1-212ENST00000614616 M0QXV9 152 aa10.89□□□□□ -0.67
CHD1-212ENST00000614616 DYNAPQ8N1N2 210 aa10.89□□□□□ -0.67
CHD1-212ENST00000614616 KLHL30-AS1Q8NEE0 82 aa10.89□□□□□ -0.67
CHD1-212ENST00000614616 C11orf86A6NJI1 115 aa10.89□□□□□ -0.67
CHD1-212ENST00000614616 CCDC179H3BU77 68 aa10.88□□□□□ -0.67
CHD1-212ENST00000614616 CLEC2BQ92478 149 aa10.88□□□□□ -0.67
CHD1-212ENST00000614616 FUSP35637 526 aaKnown RBP eCLIP10.88□□□□□ -0.675e-7■■■■□ 22.4
CHD1-212ENST00000614616 ATP5J2P56134 94 aa10.88□□□□□ -0.67
CHD1-212ENST00000614616 FAM110AQ9BQ89 295 aa10.88□□□□□ -0.67
CHD1-212ENST00000614616 GVINP1Q7Z2Y8 2422 aa10.88□□□□□ -0.67
CHD1-212ENST00000614616 IGLV3-19P01714 112 aa10.88□□□□□ -0.67
CHD1-212ENST00000614616 UPK3BQ9BT76 320 aa10.88□□□□□ -0.67
CHD1-212ENST00000614616 Q6ZR03 302 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms