RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 C11orf71Q6IPW1 123 aa17.05■□□□□ 0.32
SHANK2-220ENST00000608988 ITLN2Q8WWU7 325 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-220ENST00000608988 DLX4Q92988 240 aaPredicted RBP17.05■□□□□ 0.32
SHANK2-220ENST00000608988 SIRPDQ9H106 197 aa17.05■□□□□ 0.32
SHANK2-220ENST00000608988 CEP250Q9BV73 2442 aa17.05■□□□□ 0.32
SHANK2-220ENST00000608988 RPL32P62910 135 aaKnown RBP17.05■□□□□ 0.32
SHANK2-220ENST00000608988 LCNL1Q6ZST4 164 aa17.05■□□□□ 0.32
SHANK2-220ENST00000608988 BAALCQ8WXS3 180 aa17.05■□□□□ 0.32
SHANK2-220ENST00000608988 OVOL1O14753 267 aa17.04■□□□□ 0.32
SHANK2-220ENST00000608988 PRR30Q53SZ7 412 aaPredicted RBP17.04■□□□□ 0.32
SHANK2-220ENST00000608988 C16orf92Q96LL3 132 aa17.04■□□□□ 0.32
SHANK2-220ENST00000608988 C1QTNF4Q9BXJ3 329 aa17.04■□□□□ 0.32
SHANK2-220ENST00000608988 IGHV1-69DA0A0B4J2H0 117 aa17.03■□□□□ 0.32
SHANK2-220ENST00000608988 IGHV3-66A0A0C4DH42 116 aa17.03■□□□□ 0.32
SHANK2-220ENST00000608988 ASIPP42127 132 aa17.03■□□□□ 0.32
SHANK2-220ENST00000608988 UBE2D1P51668 147 aa17.03■□□□□ 0.32
SHANK2-220ENST00000608988 UBE2E1P51965 193 aa17.03■□□□□ 0.32
SHANK2-220ENST00000608988 SCGB2A2Q13296 93 aa17.03■□□□□ 0.32
SHANK2-220ENST00000608988 PRADC1Q9BSG0 188 aa17.03■□□□□ 0.32
SHANK2-220ENST00000608988 RP1L1Q8IWN7 2480 aaPredicted RBP17.03■□□□□ 0.32
SHANK2-220ENST00000608988 AMTNQ6UX39 209 aa17.03■□□□□ 0.32
SHANK2-220ENST00000608988 C2orf66Q6UXQ4 117 aa17.03■□□□□ 0.32
SHANK2-220ENST00000608988 POM121L12Q8N7R1 296 aa17.03■□□□□ 0.32
SHANK2-220ENST00000608988 GLMPQ8WWB7 406 aa17.03■□□□□ 0.32
SHANK2-220ENST00000608988 CYSLTR1Q9Y271 337 aa17.03■□□□□ 0.32
SHANK2-220ENST00000608988 APOMO95445 188 aa17.02■□□□□ 0.32
SHANK2-220ENST00000608988 SPOCK3Q9BQ16 436 aa17.02■□□□□ 0.32
SHANK2-220ENST00000608988 VCX2Q9H322 139 aa17.02■□□□□ 0.32
SHANK2-220ENST00000608988 PGPEP1Q9NXJ5 209 aa17.02■□□□□ 0.32
SHANK2-220ENST00000608988 TRBV7-9A0A0J9YWB2 115 aa17.01■□□□□ 0.31
SHANK2-220ENST00000608988 FAM90A27PA6NNH2 459 aa17.01■□□□□ 0.31
SHANK2-220ENST00000608988 LY6HO94772 140 aa17.01■□□□□ 0.31
SHANK2-220ENST00000608988 ATP5G2Q06055 141 aa17.01■□□□□ 0.31
SHANK2-220ENST00000608988 CFAP126Q5VTH2 177 aa17.01■□□□□ 0.31
SHANK2-220ENST00000608988 MRPL16Q9NX20 251 aaKnown RBP17.01■□□□□ 0.31
SHANK2-220ENST00000608988 PRSS29PA6NIE9 313 aa17.01■□□□□ 0.31
SHANK2-220ENST00000608988 ZNF815PA8K554 130 aa17.01■□□□□ 0.31
SHANK2-220ENST00000608988 COX6B1P14854 86 aa17.01■□□□□ 0.31
SHANK2-220ENST00000608988 LOC400499M0QZD8 3231 aa17.01■□□□□ 0.31
SHANK2-220ENST00000608988 FAM223BA6NKX1 122 aa17■□□□□ 0.31
SHANK2-220ENST00000608988 HERVK_113P61574 105 aa17■□□□□ 0.31
SHANK2-220ENST00000608988 FOXI1Q12951 378 aa17■□□□□ 0.31
SHANK2-220ENST00000608988 PRR9Q5T870 116 aa17■□□□□ 0.31
SHANK2-220ENST00000608988 CLEC2AQ6UVW9 174 aa17■□□□□ 0.31
SHANK2-220ENST00000608988 FAM223AQ8IWN6 122 aa17■□□□□ 0.31
SHANK2-220ENST00000608988 ZFAND2AQ8N6M9 145 aa17■□□□□ 0.31
SHANK2-220ENST00000608988 OR10J6PQ8NGY7 276 aa17■□□□□ 0.31
SHANK2-220ENST00000608988 RNF223E7ERA6 249 aa16.99■□□□□ 0.31
SHANK2-220ENST00000608988 S100A4P26447 101 aaKnown RBP16.99■□□□□ 0.31
SHANK2-220ENST00000608988 APRG1Q8IVJ8 170 aa16.99■□□□□ 0.31
SHANK2-220ENST00000608988 PHLDA3Q9Y5J5 127 aa16.99■□□□□ 0.31
SHANK2-220ENST00000608988 MTURNQ8N3F0 131 aa16.98■□□□□ 0.31
SHANK2-220ENST00000608988 AJUBAQ96IF1 538 aa16.98■□□□□ 0.31
SHANK2-220ENST00000608988 NXPH4O95158 308 aa16.97■□□□□ 0.31
SHANK2-220ENST00000608988 UBE2D3P61077 147 aa16.97■□□□□ 0.31
SHANK2-220ENST00000608988 UBE2D2P62837 147 aa16.97■□□□□ 0.31
SHANK2-220ENST00000608988 SCGB1D4Q6XE38 83 aa16.97■□□□□ 0.31
SHANK2-220ENST00000608988 KLK15Q9H2R5 256 aa16.97■□□□□ 0.31
SHANK2-220ENST00000608988 PTPRZ1P23471 2315 aaPredicted RBP16.97■□□□□ 0.31
SHANK2-220ENST00000608988 IGHV3OR16-13A0A075B7E8 117 aa16.97■□□□□ 0.31
SHANK2-220ENST00000608988 IGHV3-74A0A0B4J1X5 117 aa16.97■□□□□ 0.31
SHANK2-220ENST00000608988 ZFP36P26651 326 aaKnown RBP16.97■□□□□ 0.31
SHANK2-220ENST00000608988 CRIP2P52943 208 aaPredicted RBP16.96■□□□□ 0.31
SHANK2-220ENST00000608988 SRSF9Q13242 221 aaKnown RBP eCLIP16.96■□□□□ 0.31
SHANK2-220ENST00000608988 FAM19A4Q96LR4 140 aa16.96■□□□□ 0.31
SHANK2-220ENST00000608988 TRBV20-1A0A075B6N2 111 aa16.95■□□□□ 0.3
SHANK2-220ENST00000608988 GRNP28799 593 aaKnown RBP16.95■□□□□ 0.3
SHANK2-220ENST00000608988 Q6ZQT7 251 aa16.95■□□□□ 0.3
SHANK2-220ENST00000608988 RPL39LQ96EH5 51 aaKnown RBP16.95■□□□□ 0.3
SHANK2-220ENST00000608988 TMEM141Q96I45 108 aa16.95■□□□□ 0.3
SHANK2-220ENST00000608988 C20orf173Q96LM9 149 aa16.95■□□□□ 0.3
SHANK2-220ENST00000608988 AGRNO00468 2067 aa16.95■□□□□ 0.3
SHANK2-220ENST00000608988 IGHV4OR15-8A0A075B7B6 117 aa16.95■□□□□ 0.3
SHANK2-220ENST00000608988 A0A087WW49 117 aa16.95■□□□□ 0.3
SHANK2-220ENST00000608988 IGHV3-49A0A0A0MS15 119 aa16.95■□□□□ 0.3
SHANK2-220ENST00000608988 G3V318 75 aa16.95■□□□□ 0.3
SHANK2-220ENST00000608988 TSPAN13O95857 204 aa16.95■□□□□ 0.3
SHANK2-220ENST00000608988 CD7P09564 240 aa16.95■□□□□ 0.3
SHANK2-220ENST00000608988 C14orf178Q8N769 122 aaPredicted RBP16.95■□□□□ 0.3
SHANK2-220ENST00000608988 DCHS1Q96JQ0 3298 aa16.94■□□□□ 0.3
SHANK2-220ENST00000608988 SOCS3O14543 225 aa16.93■□□□□ 0.3
SHANK2-220ENST00000608988 MGPP08493 103 aa16.93■□□□□ 0.3
SHANK2-220ENST00000608988 GPHB5Q86YW7 130 aa16.93■□□□□ 0.3
SHANK2-220ENST00000608988 CKS1BP61024 79 aa16.93■□□□□ 0.3
SHANK2-220ENST00000608988 ANXA2RQ3ZCQ2 193 aa16.93■□□□□ 0.3
SHANK2-220ENST00000608988 C19orf54Q5BKX5 351 aa16.93■□□□□ 0.3
SHANK2-220ENST00000608988 C5orf56Q8N8D9 126 aa16.93■□□□□ 0.3
SHANK2-220ENST00000608988 PPDPFLQ8WWR9 84 aa16.93■□□□□ 0.3
SHANK2-220ENST00000608988 ZZEF1O43149 2961 aa16.92■□□□□ 0.3
SHANK2-220ENST00000608988 NDUFA4O00483 81 aa16.92■□□□□ 0.3
SHANK2-220ENST00000608988 SAA4P35542 130 aa16.92■□□□□ 0.3
SHANK2-220ENST00000608988 SMCPP49901 116 aaPredicted RBP16.92■□□□□ 0.3
SHANK2-220ENST00000608988 INSL3P51460 131 aa16.92■□□□□ 0.3
SHANK2-220ENST00000608988 PMVKQ15126 192 aa16.91■□□□□ 0.3
SHANK2-220ENST00000608988 SBSPONQ8IVN8 264 aa16.91■□□□□ 0.3
SHANK2-220ENST00000608988 PLEKHB2Q96CS7 222 aa16.91■□□□□ 0.3
SHANK2-220ENST00000608988 TIMM17AQ99595 171 aa16.91■□□□□ 0.3
SHANK2-220ENST00000608988 PSMB2P49721 201 aa16.9■□□□□ 0.3
SHANK2-220ENST00000608988 NDUFA11Q86Y39 141 aa16.9■□□□□ 0.3
SHANK2-220ENST00000608988 TRAV41A0A0B4J266 112 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms