RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 LXNQ9BS40 222 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 CCDC32Q9BV29 185 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 ATPIF1Q9UII2 106 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 JMJD1CQ15652 2540 aa-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 MAP2P11137 1827 aaKnown RBP-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 BLMP54132 1417 aaPredicted RBP-0.13□□□□□ -2.43
SNORA28-201ENST00000606769 ABCA12Q86UK0 2595 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 CELSR1Q9NYQ6 3014 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 MED23Q9ULK4 1368 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 A0A0G2JMM0 328 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 CXorf51AA0A1B0GTR3 108 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 PRORSD1PA6NEY8 169 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 IFITM5A6NNB3 132 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 TPST1O60507 370 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 TCRAP04437 139 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 MPC1LP0DKB6 136 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 KLKP1Q107X0 134 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 IQCJQ1A5X6 159 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 OR4S1Q8NGB4 309 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 OR8J3Q8NGG0 315 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 DMAC1Q96GE9 116 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 AP1S3Q96PC3 154 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 TMEM14BQ9NUH8 114 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 SSPOA2VEC9 5147 aa-0.14□□□□□ -2.43
SNORA28-201ENST00000606769 MYH1P12882 1939 aa-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 ABCA4P78363 2273 aa-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 XIRP1Q702N8 1843 aaKnown RBP-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 OTOGQ6ZRI0 2925 aa-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 A0A087WTM6 91 aa-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 E7EQ34 232 aa-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 UQCRQO14949 82 aa-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 CD3DP04234 171 aa-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 CCKP06307 115 aa-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 ADCYAP1P18509 176 aa-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 SRP9P49458 86 aaKnown RBP-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 TMEM128Q5BJH2 165 aa-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 TOMM20LQ6UXN7 152 aa-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 SMIM7Q9BQ49 75 aa-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 NDUFAF1Q9Y375 327 aa-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 POLQO75417 2590 aa-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 NINQ8N4C6 2090 aa-0.15□□□□□ -2.43
SNORA28-201ENST00000606769 PTPRMP28827 1452 aa-0.16□□□□□ -2.43
SNORA28-201ENST00000606769 ARAP1Q96P48 1450 aa-0.16□□□□□ -2.43
SNORA28-201ENST00000606769 NCOR2Q9Y618 2525 aa-0.16□□□□□ -2.43
SNORA28-201ENST00000606769 COL7A1Q02388 2944 aa-0.16□□□□□ -2.43
SNORA28-201ENST00000606769 ANK2Q01484 3957 aa-0.16□□□□□ -2.43
SNORA28-201ENST00000606769 IGHV1-24A0A0C4DH33 117 aa-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 A0A1B0GW64 132 aa-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 PGRMC1O00264 195 aaKnown RBP-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 FAM107AO95990 144 aa-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 S100A5P33763 92 aa-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 ETV6P41212 452 aa-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 EMX2Q04743 252 aa-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 IDO2Q6ZQW0 420 aa-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 VMO1Q7Z5L0 202 aa-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 OR9Q1Q8NGQ5 310 aa-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 DDA1Q9BW61 102 aa-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 ATG5Q9H1Y0 275 aa-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 CENPHQ9H3R5 247 aa-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 METTL1Q9UBP6 276 aaKnown RBP-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 DNAJC15Q9Y5T4 150 aa-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 SSC5DA1L4H1 1573 aa-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 DMBT1Q9UGM3 2413 aaPredicted RBP-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 IGF2RP11717 2491 aa-0.16□□□□□ -2.44
SNORA28-201ENST00000606769 CASZ1Q86V15 1759 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 HELZP42694 1942 aaKnown RBP-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 OVOS2A0A0G2JMS6 1433 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 A0A1B0GV72 72 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 PLXNA2O75051 1894 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 IFNA21P01568 189 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 MT-ND4LP03901 98 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 NBEAP1P0C6P0 100 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 PYYP10082 97 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 SDC4P31431 198 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 CKS2P33552 79 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 KDM5CP41229 1560 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 ELOF1P60002 83 aaKnown RBP-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 TFAMQ00059 246 aaKnown RBP-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 HSD17B12Q53GQ0 312 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 SAMD13Q5VXD3 122 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 TMEM91Q6ZNR0 172 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 MED13LQ71F56 2210 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 HIVEP3Q5T1R4 2406 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 IGSF10Q6WRI0 2623 aa-0.17□□□□□ -2.44
SNORA28-201ENST00000606769 PTPRZ1P23471 2315 aaPredicted RBP-0.18□□□□□ -2.44
SNORA28-201ENST00000606769 TNS1Q9HBL0 1735 aaKnown RBP-0.18□□□□□ -2.44
SNORA28-201ENST00000606769 SOGA1O94964 1423 aa-0.18□□□□□ -2.44
SNORA28-201ENST00000606769 LAMB1P07942 1786 aa-0.18□□□□□ -2.44
SNORA28-201ENST00000606769 GVQW2A0A096LPI5 108 aaPredicted RBP-0.18□□□□□ -2.44
SNORA28-201ENST00000606769 TRBV10-1A0A0K0K1A3 114 aa-0.18□□□□□ -2.44
SNORA28-201ENST00000606769 OR2H2O95918 312 aa-0.18□□□□□ -2.44
SNORA28-201ENST00000606769 PCBD1P61457 104 aa-0.18□□□□□ -2.44
SNORA28-201ENST00000606769 RPS28P62857 69 aaKnown RBP-0.18□□□□□ -2.44
SNORA28-201ENST00000606769 OR2T2Q6IF00 324 aa-0.18□□□□□ -2.44
SNORA28-201ENST00000606769 VIRMAQ69YN4 1812 aaKnown RBP-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 TRAV36DV7A0A075B6V5 113 aa-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 TRAV17A0A0B4J275 112 aa-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 J3KT08 172 aa-0.19□□□□□ -2.44
SNORA28-201ENST00000606769 SLC25A6P12236 298 aa-0.19□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms