RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 ERG28Q9UKR5 140 aa11.9□□□□□ -0.5
RER1-209ENST00000605895 F8VRH5 84 aa11.89□□□□□ -0.51
RER1-209ENST00000605895 TRPT1Q86TN4 253 aaKnown RBP11.89□□□□□ -0.51
RER1-209ENST00000605895 LINC00311Q8N616 119 aa11.89□□□□□ -0.51
RER1-209ENST00000605895 NRACQ8N912 160 aa11.89□□□□□ -0.51
RER1-209ENST00000605895 IGHV3-64A0A075B6Q5 118 aa11.89□□□□□ -0.51
RER1-209ENST00000605895 CD59P13987 128 aa11.89□□□□□ -0.51
RER1-209ENST00000605895 Q6ZS46 218 aa11.89□□□□□ -0.51
RER1-209ENST00000605895 RPL7P18124 248 aaKnown RBP11.89□□□□□ -0.51
RER1-209ENST00000605895 PLNP26678 52 aa11.89□□□□□ -0.51
RER1-209ENST00000605895 MFAP4P55083 255 aa11.89□□□□□ -0.51
RER1-209ENST00000605895 AJUBAQ96IF1 538 aa11.89□□□□□ -0.51
RER1-209ENST00000605895 C21orf62Q9NYP8 219 aa11.89□□□□□ -0.51
RER1-209ENST00000605895 TRAV8-2A0A0B4J237 113 aa11.88□□□□□ -0.51
RER1-209ENST00000605895 NDPQ00604 133 aa11.88□□□□□ -0.51
RER1-209ENST00000605895 TEX29Q8N6K0 151 aa11.88□□□□□ -0.51
RER1-209ENST00000605895 C14orf178Q8N769 122 aaPredicted RBP11.88□□□□□ -0.51
RER1-209ENST00000605895 FANCD2OSQ96PS1 177 aa11.88□□□□□ -0.51
RER1-209ENST00000605895 SORL1Q92673 2214 aa11.88□□□□□ -0.51
RER1-209ENST00000605895 TLN1Q9Y490 2541 aaKnown RBP11.88□□□□□ -0.51
RER1-209ENST00000605895 SHISA9B4DS77 424 aa11.88□□□□□ -0.51
RER1-209ENST00000605895 AGPAT4-IT1Q9H0P7 198 aa11.88□□□□□ -0.51
RER1-209ENST00000605895 CREBBPQ92793 2442 aa11.88□□□□□ -0.51
RER1-209ENST00000605895 IGKV3-7A0A075B6H7 116 aa11.87□□□□□ -0.51
RER1-209ENST00000605895 CRLF1O75462 422 aa11.87□□□□□ -0.51
RER1-209ENST00000605895 IGLV1-47P01700 117 aa11.87□□□□□ -0.51
RER1-209ENST00000605895 ZFAND6Q6FIF0 208 aa11.87□□□□□ -0.51
RER1-209ENST00000605895 F8W735 103 aaPredicted RBP11.87□□□□□ -0.51
RER1-209ENST00000605895 TAL2Q16559 108 aa11.87□□□□□ -0.51
RER1-209ENST00000605895 SHISA2Q6UWI4 295 aa11.87□□□□□ -0.51
RER1-209ENST00000605895 PPDPFLQ8WWR9 84 aa11.87□□□□□ -0.51
RER1-209ENST00000605895 ANKHD1Q8IWZ3 2542 aaKnown RBP11.87□□□□□ -0.51
RER1-209ENST00000605895 MBD3L4A6NDZ8 208 aaPredicted RBP11.86□□□□□ -0.51
RER1-209ENST00000605895 MBD3L3A6NE82 208 aaPredicted RBP11.86□□□□□ -0.51
RER1-209ENST00000605895 MBD3L5A6NJ08 208 aaPredicted RBP11.86□□□□□ -0.51
RER1-209ENST00000605895 C9JAW5 83 aa11.86□□□□□ -0.51
RER1-209ENST00000605895 CCDC179H3BU77 68 aa11.86□□□□□ -0.51
RER1-209ENST00000605895 SMIM20Q8N5G0 67 aa11.86□□□□□ -0.51
RER1-209ENST00000605895 MBD3L2Q8NHZ7 208 aaPredicted RBP11.86□□□□□ -0.51
RER1-209ENST00000605895 VSTM5A8MXK1 200 aa11.86□□□□□ -0.51
RER1-209ENST00000605895 PDE6HQ13956 83 aa11.86□□□□□ -0.51
RER1-209ENST00000605895 TRAV4A0A0B4J268 109 aa11.86□□□□□ -0.51
RER1-209ENST00000605895 A8MWV9 139 aa11.86□□□□□ -0.51
RER1-209ENST00000605895 TEN1Q86WV5 123 aa11.86□□□□□ -0.51
RER1-209ENST00000605895 RASL10AQ92737 203 aa11.86□□□□□ -0.51
RER1-209ENST00000605895 CDX4O14627 284 aaPredicted RBP11.85□□□□□ -0.51
RER1-209ENST00000605895 ZNF688P0C7X2 276 aa11.84□□□□□ -0.51
RER1-209ENST00000605895 C2orf66Q6UXQ4 117 aa11.84□□□□□ -0.51
RER1-209ENST00000605895 CUL9Q8IWT3 2517 aa11.84□□□□□ -0.51
RER1-209ENST00000605895 NBR2O15453 112 aa11.84□□□□□ -0.51
RER1-209ENST00000605895 DUSP14O95147 198 aaKnown RBP11.84□□□□□ -0.51
RER1-209ENST00000605895 IGHV4-39P01824 125 aa11.84□□□□□ -0.51
RER1-209ENST00000605895 CTSGP08311 255 aa11.84□□□□□ -0.51
RER1-209ENST00000605895 GAGE5Q13069 117 aa11.84□□□□□ -0.51
RER1-209ENST00000605895 GAGE6Q13070 117 aa11.84□□□□□ -0.51
RER1-209ENST00000605895 TMEM170BQ5T4T1 132 aa11.84□□□□□ -0.51
RER1-209ENST00000605895 COL27A1Q8IZC6 1860 aaPredicted RBP11.84□□□□□ -0.51
RER1-209ENST00000605895 HERV-K104P63124 156 aa11.84□□□□□ -0.51
RER1-209ENST00000605895 BAALCQ8WXS3 180 aa11.84□□□□□ -0.51
RER1-209ENST00000605895 RNASE6Q93091 150 aaKnown RBP11.84□□□□□ -0.51
RER1-209ENST00000605895 SMIM2Q9BVW6 85 aa11.84□□□□□ -0.51
RER1-209ENST00000605895 ECSCRQ19T08 205 aa11.83□□□□□ -0.52
RER1-209ENST00000605895 COLQQ9Y215 455 aaPredicted RBP11.83□□□□□ -0.52
RER1-209ENST00000605895 ZFHX2Q9C0A1 2572 aaPredicted RBP11.83□□□□□ -0.52
RER1-209ENST00000605895 S100A4P26447 101 aaKnown RBP11.83□□□□□ -0.52
RER1-209ENST00000605895 NDUFA11Q86Y39 141 aa11.83□□□□□ -0.52
RER1-209ENST00000605895 CEP295Q9C0D2 2601 aa11.82□□□□□ -0.52
RER1-209ENST00000605895 IGHV7-4-1A0A0J9YVY3 117 aa11.82□□□□□ -0.52
RER1-209ENST00000605895 CLEC3BP05452 202 aa11.82□□□□□ -0.52
RER1-209ENST00000605895 THBDP07204 575 aa11.82□□□□□ -0.52
RER1-209ENST00000605895 NHLRC4P0CG21 123 aaPredicted RBP11.82□□□□□ -0.52
RER1-209ENST00000605895 OR11H6Q8NGC7 330 aa11.82□□□□□ -0.52
RER1-209ENST00000605895 C11orf86A6NJI1 115 aa11.82□□□□□ -0.52
RER1-209ENST00000605895 A6NJY4 79 aa11.82□□□□□ -0.52
RER1-209ENST00000605895 CFC1BP0CG36 223 aa11.82□□□□□ -0.52
RER1-209ENST00000605895 CFC1P0CG37 223 aa11.82□□□□□ -0.52
RER1-209ENST00000605895 RPL39P62891 51 aaKnown RBP11.82□□□□□ -0.52
RER1-209ENST00000605895 PRR9Q5T870 116 aa11.82□□□□□ -0.52
RER1-209ENST00000605895 SCGB2A1O75556 95 aa11.81□□□□□ -0.52
RER1-209ENST00000605895 Q1RN00 199 aa11.81□□□□□ -0.52
RER1-209ENST00000605895 NEXN-AS1Q8NBZ9 246 aa11.81□□□□□ -0.52
RER1-209ENST00000605895 TSPEAR-AS2P59090 65 aa11.81□□□□□ -0.52
RER1-209ENST00000605895 LINC01559Q495D7 138 aa11.81□□□□□ -0.52
RER1-209ENST00000605895 RAB1BQ9H0U4 201 aa11.81□□□□□ -0.52
RER1-209ENST00000605895 MSRB2Q9Y3D2 182 aa11.81□□□□□ -0.52
RER1-209ENST00000605895 ELANEP08246 267 aa11.81□□□□□ -0.52
RER1-209ENST00000605895 SUMO2P61956 95 aaKnown RBP11.81□□□□□ -0.52
RER1-209ENST00000605895 NTN5Q8WTR8 489 aaPredicted RBP11.81□□□□□ -0.52
RER1-209ENST00000605895 CD7P09564 240 aa11.8□□□□□ -0.52
RER1-209ENST00000605895 GAGE2BQ13066 116 aa11.8□□□□□ -0.52
RER1-209ENST00000605895 GAGE2EQ4V326 116 aa11.8□□□□□ -0.52
RER1-209ENST00000605895 CNFNQ9BYD5 112 aa11.8□□□□□ -0.52
RER1-209ENST00000605895 GAGE2DQ9UEU5 116 aa11.8□□□□□ -0.52
RER1-209ENST00000605895 IGLV11-55A0A075B6I3 123 aa11.8□□□□□ -0.52
RER1-209ENST00000605895 LINC01546A6NGU7 62 aa11.8□□□□□ -0.52
RER1-209ENST00000605895 UBE2D1P51668 147 aa11.8□□□□□ -0.52
RER1-209ENST00000605895 C5orf64Q2M2E5 130 aa11.8□□□□□ -0.52
RER1-209ENST00000605895 OPRPNQ99935 248 aaPredicted RBP11.8□□□□□ -0.52
RER1-209ENST00000605895 NOTCH3Q9UM47 2321 aa11.8□□□□□ -0.52
RER1-209ENST00000605895 TNFRSF13BO14836 293 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms