RNA–Protein interactions for RNA: ENST00000603232.6

CELF4-223, Transcript of CUGBP Elav-like family member 4, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene CELF4, Length 1,906 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-223	ENST00000603232	OR4X2	Q8NGF9	303 aa		11.84	□□□□□ -0.51
CELF4-223	ENST00000603232	MRPL53	Q96EL3	112 aa	Known RBP	11.84	□□□□□ -0.51
CELF4-223	ENST00000603232	MAP1LC3A	Q9H492	121 aa		11.84	□□□□□ -0.51
CELF4-223	ENST00000603232	NXT2	Q9NPJ8	142 aa	Known RBP	11.84	□□□□□ -0.51
CELF4-223	ENST00000603232	MXRA5	Q9NR99	2828 aa		11.84	□□□□□ -0.51
CELF4-223	ENST00000603232	NSD1	Q96L73	2696 aa	Predicted RBP	11.84	□□□□□ -0.51
CELF4-223	ENST00000603232		Q8TAT8	98 aa		11.84	□□□□□ -0.51
CELF4-223	ENST00000603232		A0A1W2PRD5	423 aa		11.83	□□□□□ -0.52
CELF4-223	ENST00000603232		A0A1W2PRF3	423 aa		11.83	□□□□□ -0.52
CELF4-223	ENST00000603232		A0A1W2PRM7	423 aa		11.83	□□□□□ -0.52
CELF4-223	ENST00000603232		A6NDN8	102 aa		11.83	□□□□□ -0.52
CELF4-223	ENST00000603232	PRSS47	A8MTI9	375 aa		11.83	□□□□□ -0.52
CELF4-223	ENST00000603232		K7EP34	96 aa		11.83	□□□□□ -0.52
CELF4-223	ENST00000603232	ATP6V0B	Q99437	205 aa		11.83	□□□□□ -0.52
CELF4-223	ENST00000603232	ZMAT4	Q9H898	229 aa		11.83	□□□□□ -0.52
CELF4-223	ENST00000603232	SAP30	O75446	220 aa		11.82	□□□□□ -0.52
CELF4-223	ENST00000603232	PRB4	P10163	310 aa	Predicted RBP	11.82	□□□□□ -0.52
CELF4-223	ENST00000603232	IGHV3-23	P01764	117 aa		11.82	□□□□□ -0.52
CELF4-223	ENST00000603232	IGHV4-38-2	P0DP08	117 aa		11.82	□□□□□ -0.52
CELF4-223	ENST00000603232	FCER1G	P30273	86 aa		11.82	□□□□□ -0.52
CELF4-223	ENST00000603232	UBE2E1	P51965	193 aa		11.82	□□□□□ -0.52
CELF4-223	ENST00000603232	KIR3DS1	Q14943	382 aa		11.82	□□□□□ -0.52
CELF4-223	ENST00000603232	GTF2H5	Q6ZYL4	71 aa		11.82	□□□□□ -0.52
CELF4-223	ENST00000603232	NEGR1	Q7Z3B1	354 aa		11.82	□□□□□ -0.52
CELF4-223	ENST00000603232	HIVEP2	P31629	2446 aa		11.82	□□□□□ -0.52
CELF4-223	ENST00000603232	TRAV40	A0A0B4J280	105 aa		11.81	□□□□□ -0.52
CELF4-223	ENST00000603232		G3V4G9	280 aa		11.81	□□□□□ -0.52
CELF4-223	ENST00000603232	ORM1	P02763	201 aa		11.81	□□□□□ -0.52
CELF4-223	ENST00000603232	HLA-DMB	P28068	263 aa		11.81	□□□□□ -0.52
CELF4-223	ENST00000603232	C15orf32	Q32M92	178 aa		11.81	□□□□□ -0.52
CELF4-223	ENST00000603232	UNQ5830/PRO19650/PRO19816	Q6UY13	95 aa		11.81	□□□□□ -0.52
CELF4-223	ENST00000603232	MEGF9	Q9H1U4	602 aa		11.81	□□□□□ -0.52
CELF4-223	ENST00000603232	GATA3	P23771	443 aa		11.8	□□□□□ -0.52
CELF4-223	ENST00000603232	AJUBA	Q96IF1	538 aa		11.8	□□□□□ -0.52
CELF4-223	ENST00000603232		A0A0G2JLM5	398 aa		11.8	□□□□□ -0.52
CELF4-223	ENST00000603232	CLPSL1	A2RUU4	121 aa		11.8	□□□□□ -0.52
CELF4-223	ENST00000603232	SMKR1	H3BMG3	65 aa		11.8	□□□□□ -0.52
CELF4-223	ENST00000603232	TNFRSF6B	O95407	300 aa		11.8	□□□□□ -0.52
CELF4-223	ENST00000603232	BRD3OS	Q6XYD6	125 aa		11.8	□□□□□ -0.52
CELF4-223	ENST00000603232	SMPX	Q9UHP9	88 aa		11.8	□□□□□ -0.52
CELF4-223	ENST00000603232	FN1	P02751	2386 aa	Known RBP	11.79	□□□□□ -0.52
CELF4-223	ENST00000603232	IGHV4-4	A0A075B6R2	117 aa		11.79	□□□□□ -0.52
CELF4-223	ENST00000603232	CENPVL3	A0A0U1RRI6	287 aa		11.79	□□□□□ -0.52
CELF4-223	ENST00000603232		H3BUT2	72 aa		11.79	□□□□□ -0.52
CELF4-223	ENST00000603232	FXYD7	P58549	80 aa		11.79	□□□□□ -0.52
CELF4-223	ENST00000603232	PCP2	Q8IVA1	136 aa		11.79	□□□□□ -0.52
CELF4-223	ENST00000603232	HIGD1B	Q9P298	99 aa		11.79	□□□□□ -0.52
CELF4-223	ENST00000603232		U3KQE9	123 aa		11.79	□□□□□ -0.52
CELF4-223	ENST00000603232	CUBN	O60494	3623 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232	TRBV7-1	A0A0A6YYK4	115 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232		J3QLI3	93 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232	HLA-DRB4	P13762	266 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232		Q8N8P6	123 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232	OR2K2	Q8NGT1	345 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232	MSRB1	Q9NZV6	116 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232	HLA-DRB4	X5D2U9	266 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232	IGLV2-18	A0A075B6J9	118 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232	PRAC2	D3DTV9	90 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232	CLEC3B	P05452	202 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232	ODF1	Q14990	250 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232	IGFL4	Q6B9Z1	124 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232	C9orf47	Q6ZRZ4	202 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232	CCDC140	Q96MF4	163 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232	DKK2	Q9UBU2	259 aa		11.78	□□□□□ -0.52
CELF4-223	ENST00000603232	IGKV3D-20	A0A0C4DH25	116 aa		11.77	□□□□□ -0.53
CELF4-223	ENST00000603232		A0A1W2PPM0	123 aa		11.77	□□□□□ -0.53
CELF4-223	ENST00000603232	INAFM1	C9JVW0	142 aa		11.77	□□□□□ -0.53
CELF4-223	ENST00000603232	ATP6V0E1	O15342	81 aa		11.77	□□□□□ -0.53
CELF4-223	ENST00000603232	ATP5L	O75964	103 aa		11.77	□□□□□ -0.53
CELF4-223	ENST00000603232	EVI2A	P22794	236 aa		11.77	□□□□□ -0.53
CELF4-223	ENST00000603232	ERCC8	Q13216	396 aa		11.77	□□□□□ -0.53
CELF4-223	ENST00000603232	EEF1AKMT3	Q96AZ1	226 aa		11.77	□□□□□ -0.53
CELF4-223	ENST00000603232	AGPAT4-IT1	Q9H0P7	198 aa		11.77	□□□□□ -0.53
CELF4-223	ENST00000603232	HHLA3	Q9XRX5	114 aa		11.77	□□□□□ -0.53
CELF4-223	ENST00000603232	LENEP	Q9Y5L5	61 aa		11.77	□□□□□ -0.53
CELF4-223	ENST00000603232	FSHB	P01225	129 aa		11.76	□□□□□ -0.53
CELF4-223	ENST00000603232	LEP	P41159	167 aa		11.76	□□□□□ -0.53
CELF4-223	ENST00000603232	AP1S3	Q96PC3	154 aa		11.76	□□□□□ -0.53
CELF4-223	ENST00000603232	TRAV8-2	A0A0B4J237	113 aa		11.75	□□□□□ -0.53
CELF4-223	ENST00000603232	IGHV1-69D	A0A0B4J2H0	117 aa		11.75	□□□□□ -0.53
CELF4-223	ENST00000603232	IGHV1-69	P01742	117 aa		11.75	□□□□□ -0.53
CELF4-223	ENST00000603232	OR5A1	Q8NGJ0	315 aa		11.75	□□□□□ -0.53
CELF4-223	ENST00000603232	METTL26	Q96S19	204 aa		11.75	□□□□□ -0.53
CELF4-223	ENST00000603232	NAA38	Q9BRA0	125 aa	Known RBP	11.75	□□□□□ -0.53
CELF4-223	ENST00000603232	IGHV7-4-1	A0A0J9YVY3	117 aa		11.74	□□□□□ -0.53
CELF4-223	ENST00000603232	CRIP2	P52943	208 aa	Predicted RBP	11.74	□□□□□ -0.53
CELF4-223	ENST00000603232	ECSCR	Q19T08	205 aa		11.74	□□□□□ -0.53
CELF4-223	ENST00000603232	TMEM78	Q5T7P6	136 aa		11.74	□□□□□ -0.53
CELF4-223	ENST00000603232	NPFF	O15130	113 aa		11.74	□□□□□ -0.53
CELF4-223	ENST00000603232	GAS8-AS1	O95177	125 aa		11.74	□□□□□ -0.53
CELF4-223	ENST00000603232	SAA4	P35542	130 aa		11.74	□□□□□ -0.53
CELF4-223	ENST00000603232	RIPPLY3	P57055	190 aa		11.74	□□□□□ -0.53
CELF4-223	ENST00000603232	RNF182	Q8N6D2	247 aa		11.74	□□□□□ -0.53
CELF4-223	ENST00000603232	C11orf21	Q9P2W6	132 aa		11.74	□□□□□ -0.53
CELF4-223	ENST00000603232	IGKV2D-26	A0A0A0MRZ7	120 aa		11.73	□□□□□ -0.53
CELF4-223	ENST00000603232	TCTA	P57738	103 aa		11.73	□□□□□ -0.53
CELF4-223	ENST00000603232	NRAC	Q8N912	160 aa		11.73	□□□□□ -0.53
CELF4-223	ENST00000603232	PHLDA1	Q8WV24	401 aa	Predicted RBP	11.73	□□□□□ -0.53
CELF4-223	ENST00000603232	NIPBL	Q6KC79	2804 aa	eCLIP	11.73	□□□□□ -0.53
CELF4-223	ENST00000603232	IGHV3-35	A0A0C4DH35	117 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms