RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 UBE2D1P51668 147 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 DEFB121Q5J5C9 76 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 CRIP3Q6Q6R5 217 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 Q6ZR03 302 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 LINC00305Q7Z4B0 112 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 OR8A1Q8NGG7 326 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 NTN5Q8WTR8 489 aaPredicted RBP3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 UBE2WQ96B02 151 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 IFI27L1Q96BM0 104 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 TIMM17AQ99595 171 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 COL5A1P20908 1838 aaPredicted RBP3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 DNAH12Q6ZR08 3092 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 CXorf51AA0A1B0GTR3 108 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 KLLNB2CW77 178 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 H3BT86 120 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 J3QKU1 62 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 IGLV2-8P01709 118 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 ZNF883P0CG24 379 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 CCL8P80075 99 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 ZFP2Q6ZN57 461 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 C5orf38Q86SI9 138 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 PRR15Q8IV56 129 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 TMEM61Q8N0U2 210 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 ZNF524Q96C55 264 aa3.76□□□□□ -1.81
SPTBN1-206ENST00000602898 IGKV2D-26A0A0A0MRZ7 120 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 LINC01549A6NIU2 74 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 ZNF138P52744 262 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 ERVK-16P61578 105 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 KISS1Q15726 138 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 DEFB134Q4QY38 66 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 KTN1-AS1Q86SY8 53 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 TMEM243Q9BU79 118 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 CYSTM1Q9H1C7 97 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 LAMTOR3Q9UHA4 124 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 MPDZO75970 2070 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 CABIN1Q9Y6J0 2220 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 INAFM1C9JVW0 142 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 IAPPP10997 89 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 HERVK_113P61574 105 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 CLLU1OSQ5K130 101 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 LINC00643Q86TS7 51 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 SERP2Q8N6R1 65 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 COPS9Q8WXC6 57 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 BBC3Q96PG8 261 aaPredicted RBP3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 XCL2Q9UBD3 114 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 UNC80Q8N2C7 3258 aa3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 MUC22E2RYF6 1773 aaPredicted RBP3.75□□□□□ -1.81
SPTBN1-206ENST00000602898 HIGD1CA8MV81 97 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 LINC00205P59089 165 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 NNATQ16517 81 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 SPANXN5Q5MJ07 72 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 RNF182Q8N6D2 247 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 PRAC1Q96KF2 57 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 TANC2Q9HCD6 1990 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 FREM3P0C091 2139 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 AGRNO00468 2067 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 IGHV3OR16-13A0A075B7E8 117 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 A0A096LNJ9 63 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 K7EMI3 77 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 SLC25A16P16260 332 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 TFF3Q07654 80 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 IGFL4Q6B9Z1 124 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 C8orf49Q96NF6 230 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 MOB4Q9Y3A3 225 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 TTC28Q96AY4 2481 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 TRGV5A0A0B4J1U4 118 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 INS-IGF2F8WCM5 200 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 COX7A2LO14548 114 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 ZNF73O43830 326 aaPredicted RBP3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 COX7A2P2O60397 106 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 HBDP02042 147 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 DEFA4P12838 97 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 ZNF80P51504 273 aaPredicted RBP3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 ZNF818PQ6ZRF7 136 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 Q8N7P7 452 aa3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 RNASE6Q93091 150 aaKnown RBP3.74□□□□□ -1.81
SPTBN1-206ENST00000602898 TRBV19A0A075B6N1 114 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 IGHV6-1A0A0B4J1U7 121 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 IGHV4-28A0A0C4DH34 117 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 PMS2P5A8MQ11 134 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 M0R378 163 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 PEX7O00628 323 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 CCL16O15467 120 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 TSHBP01222 138 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 SNRPD3P62318 126 aaKnown RBP3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 KRTAP27-1Q3LI81 207 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 GFRA4Q9GZZ7 299 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 MUC6Q6W4X9 2439 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 SHANK1Q9Y566 2161 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 TRBV10-2A0A0K0K1G8 114 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 TEX49A0A1B0GTD5 131 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 UPK2O00526 184 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 FCER1GP30273 86 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 MRPS36P82909 103 aaKnown RBP3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 TWIST1Q15672 202 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 PRSS3P2Q8NHM4 247 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 TMEM190Q8WZ59 177 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 COX14Q96I36 57 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 TMEM167BQ9NRX6 74 aa3.73□□□□□ -1.81
SPTBN1-206ENST00000602898 ZNF355PQ9NSJ1 428 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms