RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 NUPR1O60356 82 aa11.32□□□□□ -0.6
HIF3A-218ENST00000600383 NTF3P20783 257 aa11.32□□□□□ -0.6
HIF3A-218ENST00000600383 DEFB131AP59861 70 aa11.32□□□□□ -0.6
HIF3A-218ENST00000600383 JMJD1CQ15652 2540 aa11.32□□□□□ -0.6
HIF3A-218ENST00000600383 FAM19A4Q96LR4 140 aa11.32□□□□□ -0.6
HIF3A-218ENST00000600383 NIPBLQ6KC79 2804 aaeCLIP11.32□□□□□ -0.6
HIF3A-218ENST00000600383 TRAV21A0A0B4J279 112 aa11.32□□□□□ -0.6
HIF3A-218ENST00000600383 IGLC6P0CF74 106 aa11.32□□□□□ -0.6
HIF3A-218ENST00000600383 KRTAP10-3P60369 221 aa11.32□□□□□ -0.6
HIF3A-218ENST00000600383 OR10D4PQ8NGN7 298 aa11.31□□□□□ -0.6
HIF3A-218ENST00000600383 HIST1H2BLQ99880 126 aa11.31□□□□□ -0.6
HIF3A-218ENST00000600383 TP53TG3Q9ULZ0 132 aa11.31□□□□□ -0.6
HIF3A-218ENST00000600383 TIMM8BQ9Y5J9 83 aaPredicted RBP11.31□□□□□ -0.6
HIF3A-218ENST00000600383 KNCNA6PVL3 124 aa11.3□□□□□ -0.6
HIF3A-218ENST00000600383 ZNF124Q15973 351 aa11.3□□□□□ -0.6
HIF3A-218ENST00000600383 MSRB1Q9NZV6 116 aa11.3□□□□□ -0.6
HIF3A-218ENST00000600383 BAHCC1Q9P281 2608 aa11.3□□□□□ -0.6
HIF3A-218ENST00000600383 TRAV12-2A0A075B6T6 113 aa11.3□□□□□ -0.6
HIF3A-218ENST00000600383 ADARB2-AS1A8MUL3 147 aa11.3□□□□□ -0.6
HIF3A-218ENST00000600383 M0R2Z0 102 aa11.3□□□□□ -0.6
HIF3A-218ENST00000600383 SERF1AO75920 110 aa11.3□□□□□ -0.6
HIF3A-218ENST00000600383 TRAV12-3A0A0B4J271 114 aa11.29□□□□□ -0.6
HIF3A-218ENST00000600383 A0A1B0GW15 77 aa11.29□□□□□ -0.6
HIF3A-218ENST00000600383 CTRLP40313 264 aa11.29□□□□□ -0.6
HIF3A-218ENST00000600383 Q0VG73 95 aa11.29□□□□□ -0.6
HIF3A-218ENST00000600383 IQCJQ1A5X6 159 aa11.29□□□□□ -0.6
HIF3A-218ENST00000600383 ANXA2RQ3ZCQ2 193 aa11.29□□□□□ -0.6
HIF3A-218ENST00000600383 FOXI2Q6ZQN5 318 aa11.29□□□□□ -0.6
HIF3A-218ENST00000600383 ALKBH7Q9BT30 221 aaPredicted RBP11.29□□□□□ -0.6
HIF3A-218ENST00000600383 TRBV7-9A0A0J9YWB2 115 aa11.29□□□□□ -0.6
HIF3A-218ENST00000600383 SAP30O75446 220 aa11.29□□□□□ -0.6
HIF3A-218ENST00000600383 SPINK13Q1W4C9 94 aa11.29□□□□□ -0.6
HIF3A-218ENST00000600383 PYY3Q5JQD4 70 aa11.29□□□□□ -0.6
HIF3A-218ENST00000600383 OR10J3Q5JRS4 329 aa11.29□□□□□ -0.6
HIF3A-218ENST00000600383 PACRGQ96M98 296 aaPredicted RBP11.29□□□□□ -0.6
HIF3A-218ENST00000600383 LOC102724200A0A096LPH7 203 aaPredicted RBP11.28□□□□□ -0.6
HIF3A-218ENST00000600383 KLLNB2CW77 178 aa11.28□□□□□ -0.6
HIF3A-218ENST00000600383 GNRH2O43555 120 aa11.28□□□□□ -0.6
HIF3A-218ENST00000600383 AMBPP02760 352 aa11.28□□□□□ -0.6
HIF3A-218ENST00000600383 APRG1Q8IVJ8 170 aa11.28□□□□□ -0.6
HIF3A-218ENST00000600383 C18orf32Q8TCD1 76 aa11.28□□□□□ -0.6
HIF3A-218ENST00000600383 RCHY1Q96PM5 261 aa11.28□□□□□ -0.6
HIF3A-218ENST00000600383 OR4C46A6NHA9 309 aa11.27□□□□□ -0.6
HIF3A-218ENST00000600383 H3BVH4 76 aa11.27□□□□□ -0.6
HIF3A-218ENST00000600383 DUSP14O95147 198 aaKnown RBP11.27□□□□□ -0.6
HIF3A-218ENST00000600383 S100A4P26447 101 aaKnown RBP11.27□□□□□ -0.6
HIF3A-218ENST00000600383 FXYD7P58549 80 aa11.27□□□□□ -0.6
HIF3A-218ENST00000600383 OR10AG1Q8NH19 301 aa11.27□□□□□ -0.6
HIF3A-218ENST00000600383 SPRY2O43597 315 aa11.27□□□□□ -0.61
HIF3A-218ENST00000600383 LEPP41159 167 aa11.27□□□□□ -0.61
HIF3A-218ENST00000600383 LINC00310P59036 64 aa11.27□□□□□ -0.61
HIF3A-218ENST00000600383 AMN1Q8IY45 258 aa11.27□□□□□ -0.61
HIF3A-218ENST00000600383 SPAG8Q99932 426 aaPredicted RBP11.27□□□□□ -0.61
HIF3A-218ENST00000600383 CDKN1BP46527 198 aa11.26□□□□□ -0.61
HIF3A-218ENST00000600383 DNLZQ5SXM8 178 aa11.26□□□□□ -0.61
HIF3A-218ENST00000600383 FAM159AQ6UWV7 190 aa11.26□□□□□ -0.61
HIF3A-218ENST00000600383 NDUFA11Q86Y39 141 aa11.26□□□□□ -0.61
HIF3A-218ENST00000600383 TMEM18Q96B42 140 aa11.26□□□□□ -0.61
HIF3A-218ENST00000600383 MAP6D1Q9H9H5 199 aa11.26□□□□□ -0.61
HIF3A-218ENST00000600383 TRAV2A0A0B4J234 112 aa11.26□□□□□ -0.61
HIF3A-218ENST00000600383 SPANXN1Q5VSR9 72 aa11.26□□□□□ -0.61
HIF3A-218ENST00000600383 ZNF493Q6ZR52 646 aa11.26□□□□□ -0.61
HIF3A-218ENST00000600383 ZNF256Q9Y2P7 627 aaPredicted RBP11.26□□□□□ -0.61
HIF3A-218ENST00000600383 C7orf71A4D174 169 aa11.25□□□□□ -0.61
HIF3A-218ENST00000600383 PF4P02776 101 aa11.25□□□□□ -0.61
HIF3A-218ENST00000600383 TSPOP30536 169 aa11.25□□□□□ -0.61
HIF3A-218ENST00000600383 ASIPP42127 132 aa11.24□□□□□ -0.61
HIF3A-218ENST00000600383 FAM104BQ5XKR9 115 aa11.24□□□□□ -0.61
HIF3A-218ENST00000600383 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.24□□□□□ -0.61
HIF3A-218ENST00000600383 CNFNQ9BYD5 112 aa11.24□□□□□ -0.61
HIF3A-218ENST00000600383 SAMD10Q9BYL1 202 aa11.24□□□□□ -0.61
HIF3A-218ENST00000600383 SIGLEC8Q9NYZ4 499 aa11.24□□□□□ -0.61
HIF3A-218ENST00000600383 TRAV25A0A0B4J276 109 aa11.24□□□□□ -0.61
HIF3A-218ENST00000600383 H3BMM0 161 aa11.24□□□□□ -0.61
HIF3A-218ENST00000600383 ODF3Q96PU9 254 aa11.24□□□□□ -0.61
HIF3A-218ENST00000600383 M0R381 172 aa11.23□□□□□ -0.61
HIF3A-218ENST00000600383 ZNF324O75467 553 aaPredicted RBP11.23□□□□□ -0.61
HIF3A-218ENST00000600383 CD7P09564 240 aa11.23□□□□□ -0.61
HIF3A-218ENST00000600383 OR5AL1P0C617 328 aa11.23□□□□□ -0.61
HIF3A-218ENST00000600383 HLA-DRB4P13762 266 aa11.23□□□□□ -0.61
HIF3A-218ENST00000600383 AMTNQ6UX39 209 aa11.23□□□□□ -0.61
HIF3A-218ENST00000600383 GATD1Q8NB37 220 aa11.23□□□□□ -0.61
HIF3A-218ENST00000600383 HLA-DRB4X5D2U9 266 aa11.23□□□□□ -0.61
HIF3A-218ENST00000600383 D6R8Y8 96 aa11.23□□□□□ -0.61
HIF3A-218ENST00000600383 EVI2AP22794 236 aa11.23□□□□□ -0.61
HIF3A-218ENST00000600383 RNASEKQ6P5S7 137 aaKnown RBP11.23□□□□□ -0.61
HIF3A-218ENST00000600383 PHLDA3Q9Y5J5 127 aa11.23□□□□□ -0.61
HIF3A-218ENST00000600383 PMCHP20382 165 aa11.22□□□□□ -0.61
HIF3A-218ENST00000600383 MRPL51Q4U2R6 128 aaKnown RBP11.22□□□□□ -0.61
HIF3A-218ENST00000600383 NIT1Q86X76 327 aa11.22□□□□□ -0.61
HIF3A-218ENST00000600383 FAM19A2Q8N3H0 131 aa11.22□□□□□ -0.61
HIF3A-218ENST00000600383 TEP1Q99973 2627 aaKnown RBP11.22□□□□□ -0.61
HIF3A-218ENST00000600383 TMEM191AQ9H0A3 160 aa11.22□□□□□ -0.61
HIF3A-218ENST00000600383 ATRQ13535 2644 aa11.22□□□□□ -0.61
HIF3A-218ENST00000600383 SNAI2O43623 268 aa11.21□□□□□ -0.61
HIF3A-218ENST00000600383 HTN1P15515 57 aa11.21□□□□□ -0.61
HIF3A-218ENST00000600383 KCNS1Q96KK3 526 aa11.21□□□□□ -0.61
HIF3A-218ENST00000600383 TENM1Q9UKZ4 2725 aa11.21□□□□□ -0.61
HIF3A-218ENST00000600383 CYSRT1A8MQ03 144 aa11.21□□□□□ -0.62
HIF3A-218ENST00000600383 SMKR1H3BMG3 65 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 123.6 ms