RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	DDA1	Q9BW61	102 aa		0.43	□□□□□ -2.34
SOX2-OT-231	ENST00000599082	ABCA1	O95477	2261 aa		0.43	□□□□□ -2.34
SOX2-OT-231	ENST00000599082	IL7	P13232	177 aa		0.42	□□□□□ -2.34
SOX2-OT-231	ENST00000599082	ASB16-AS1	Q495Z4	193 aa		0.42	□□□□□ -2.34
SOX2-OT-231	ENST00000599082	TMEM35B	Q8NCS4	154 aa		0.42	□□□□□ -2.34
SOX2-OT-231	ENST00000599082	DMAC1	Q96GE9	116 aa		0.42	□□□□□ -2.34
SOX2-OT-231	ENST00000599082		A0A0G2JMM0	328 aa		0.41	□□□□□ -2.34
SOX2-OT-231	ENST00000599082	UQCRQ	O14949	82 aa		0.41	□□□□□ -2.34
SOX2-OT-231	ENST00000599082	CKS2	P33552	79 aa		0.41	□□□□□ -2.34
SOX2-OT-231	ENST00000599082	WDR97	A6NE52	1622 aa		0.41	□□□□□ -2.34
SOX2-OT-231	ENST00000599082	SLC25A5	P05141	298 aa	Known RBP	0.4	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	S100G	P29377	79 aa		0.4	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	IDO2	Q6ZQW0	420 aa		0.4	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	HELZ	P42694	1942 aa	Known RBP	0.4	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	RBBP6	Q7Z6E9	1792 aa	Known RBP	0.4	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	IGHV1-24	A0A0C4DH33	117 aa		0.39	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	FXYD1	O00168	92 aa		0.39	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	SMIM15	Q7Z3B0	74 aa		0.39	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	MED23	Q9ULK4	1368 aa		0.39	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	KIDINS220	Q9ULH0	1771 aa		0.39	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	DLEC1	Q9Y238	1755 aa		0.38	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	RREB1	Q92766	1687 aa		0.37	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	TPR	P12270	2363 aa	Known RBP	0.37	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	TCRA	P04437	139 aa		0.37	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	IQCJ	Q1A5X6	159 aa		0.37	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	SELENOS	Q9BQE4	189 aa		0.37	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	NDUFAF1	Q9Y375	327 aa		0.37	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	PTPRG	P23470	1445 aa		0.37	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	ABCA4	P78363	2273 aa		0.36	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	CDK12	Q9NYV4	1490 aa	Predicted RBP	0.36	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	PCBD1	P61457	104 aa		0.36	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	SPINK6	Q6UWN8	80 aa		0.36	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	OR4S1	Q8NGB4	309 aa		0.36	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	ATG5	Q9H1Y0	275 aa		0.36	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	ZCCHC6	Q5VYS8	1495 aa	Known RBP	0.35	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	LRP5	O75197	1615 aa		0.35	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	CPD	O75976	1380 aa		0.35	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	ADCYAP1	P18509	176 aa		0.35	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	SKA2	Q8WVK7	121 aa	Predicted RBP	0.35	□□□□□ -2.35
SOX2-OT-231	ENST00000599082	OVOS2	A0A0G2JMS6	1433 aa		0.34	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	RPS28	P62857	69 aa	Known RBP	0.34	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	CACNA1H	O95180	2353 aa		0.34	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	PNMA8C	A0A1B0GUJ8	204 aa		0.33	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	TSTD3	H0UI37	97 aa		0.33	□□□□□ -2.36
SOX2-OT-231	ENST00000599082		J3KT08	172 aa		0.33	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	PSPH	P78330	225 aa		0.33	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	KLKP1	Q107X0	134 aa		0.33	□□□□□ -2.36
SOX2-OT-231	ENST00000599082		Q5XG85	94 aa		0.33	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	METTL1	Q9UBP6	276 aa	Known RBP	0.33	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	TANC1	Q9C0D5	1861 aa		0.33	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	CCK	P06307	115 aa		0.32	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	UNQ5815/PRO19632	Q6UWF5	114 aa		0.32	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	KMT2D	O14686	5537 aa		0.32	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	JMJD1C	Q15652	2540 aa		0.32	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	MAP2	P11137	1827 aa	Known RBP	0.31	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	PTPRZ1	P23471	2315 aa	Predicted RBP	0.31	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	HSD17B12	Q53GQ0	312 aa		0.31	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	OR8I2	Q8N0Y5	310 aa		0.31	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	TMEM14B	Q9NUH8	114 aa		0.31	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	MED13L	Q71F56	2210 aa		0.31	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	ANK2	Q01484	3957 aa		0.31	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	DPM2	O94777	84 aa		0.3	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	HIST1H1B	P16401	226 aa	Known RBP	0.3	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	POLR2J	P52435	117 aa	Known RBP	0.3	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	GINS2	Q9Y248	185 aa		0.3	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	BLM	P54132	1417 aa	Predicted RBP	0.3	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	ARHGAP31	Q2M1Z3	1444 aa		0.3	□□□□□ -2.36
SOX2-OT-231	ENST00000599082		A0A096LNT2	108 aa		0.29	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	TRBV10-1	A0A0K0K1A3	114 aa		0.29	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	SDC4	P31431	198 aa		0.29	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	ZFYVE26	Q68DK2	2539 aa		0.29	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	KDM5C	P41229	1560 aa		0.28	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	TTC28	Q96AY4	2481 aa		0.28	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	MT-ND4L	P03901	98 aa		0.28	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	CD3D	P04234	171 aa		0.28	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	HSPB11	Q9Y547	144 aa		0.28	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	IGF2R	P11717	2491 aa		0.28	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	PIEZO1	Q92508	2521 aa		0.28	□□□□□ -2.36
SOX2-OT-231	ENST00000599082	PLXNA2	O75051	1894 aa		0.27	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	TRAV36DV7	A0A075B6V5	113 aa		0.27	□□□□□ -2.37
SOX2-OT-231	ENST00000599082		H0YJX3	145 aa		0.27	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	PAEP	P09466	180 aa		0.27	□□□□□ -2.37
SOX2-OT-231	ENST00000599082		A0A1B0GX51	115 aa		0.26	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	GNG14	A0A1W2PPG7	69 aa		0.26	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	NBEAP1	P0C6P0	100 aa		0.26	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	PLGLB1	Q02325	96 aa		0.26	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	OR8B8	Q15620	311 aa		0.26	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	TMEM91	Q6ZNR0	172 aa		0.26	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	SLC35B3	Q9H1N7	401 aa		0.26	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	CALML5	Q9NZT1	146 aa		0.26	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	SYNE2	Q8WXH0	6885 aa	Known RBP	0.26	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	ABCA12	Q86UK0	2595 aa		0.25	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	TRAV17	A0A0B4J275	112 aa		0.25	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	MPC1L	P0DKB6	136 aa		0.25	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	TMEM244	Q5VVB8	128 aa		0.24	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	DNAJC15	Q9Y5T4	150 aa		0.24	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	KDM6B	O15054	1643 aa		0.24	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	MYO7A	Q13402	2215 aa		0.23	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	ARAP1	Q96P48	1450 aa		0.23	□□□□□ -2.37
SOX2-OT-231	ENST00000599082	CXorf51A	A0A1B0GTR3	108 aa		0.23	□□□□□ -2.37

Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms