RNA–Protein interactions for RNA: ENST00000598717.5

LTBP4-223, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 5

Gene LTBP4, Length 811 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-223	ENST00000598717		B4DEV8	164 aa		13.99	□□□□□ -0.17
LTBP4-223	ENST00000598717	APOC3	P02656	99 aa		13.99	□□□□□ -0.17
LTBP4-223	ENST00000598717	OR11H2	Q8NH07	326 aa		13.99	□□□□□ -0.17
LTBP4-223	ENST00000598717	B9D2	Q9BPU9	175 aa		13.99	□□□□□ -0.17
LTBP4-223	ENST00000598717	SPATA25	Q9BR10	227 aa		13.99	□□□□□ -0.17
LTBP4-223	ENST00000598717	LINC00467	Q9BRT7	94 aa		13.99	□□□□□ -0.17
LTBP4-223	ENST00000598717	ZNF705G	A8MUZ8	300 aa	Predicted RBP	13.98	□□□□□ -0.17
LTBP4-223	ENST00000598717	GATC	O43716	136 aa	Known RBP	13.98	□□□□□ -0.17
LTBP4-223	ENST00000598717	RRN3P1	Q2M238	152 aa		13.98	□□□□□ -0.17
LTBP4-223	ENST00000598717	TDRG1	Q3Y452	100 aa		13.98	□□□□□ -0.17
LTBP4-223	ENST00000598717	LINC01559	Q495D7	138 aa		13.98	□□□□□ -0.17
LTBP4-223	ENST00000598717	OR2D3	Q8NGH3	330 aa		13.98	□□□□□ -0.17
LTBP4-223	ENST00000598717	SFRP2	Q96HF1	295 aa		13.98	□□□□□ -0.17
LTBP4-223	ENST00000598717	OVOL2	Q9BRP0	275 aa		13.98	□□□□□ -0.17
LTBP4-223	ENST00000598717	OSTC	Q9NRP0	149 aa		13.98	□□□□□ -0.17
LTBP4-223	ENST00000598717	TRGV11	A0A075B6L2	103 aa		13.97	□□□□□ -0.17
LTBP4-223	ENST00000598717	TMSB15B	A0A087X1C1	80 aa		13.97	□□□□□ -0.17
LTBP4-223	ENST00000598717	IGKV3D-20	A0A0C4DH25	116 aa		13.97	□□□□□ -0.17
LTBP4-223	ENST00000598717	SMIM9	A6NGZ8	99 aa		13.97	□□□□□ -0.17
LTBP4-223	ENST00000598717	OR10G8	Q8NGN5	311 aa		13.97	□□□□□ -0.17
LTBP4-223	ENST00000598717	NEU1	Q99519	415 aa		13.97	□□□□□ -0.17
LTBP4-223	ENST00000598717	TM2D3	Q9BRN9	247 aa		13.97	□□□□□ -0.17
LTBP4-223	ENST00000598717	RPP21	Q9H633	154 aa	Known RBP	13.97	□□□□□ -0.17
LTBP4-223	ENST00000598717	ZMAT4	Q9H898	229 aa		13.97	□□□□□ -0.17
LTBP4-223	ENST00000598717	RETN	Q9HD89	108 aa		13.97	□□□□□ -0.17
LTBP4-223	ENST00000598717	XKRY2	A2RUG3	117 aa		13.96	□□□□□ -0.17
LTBP4-223	ENST00000598717	PRM2	P04554	102 aa		13.96	□□□□□ -0.17
LTBP4-223	ENST00000598717	RPS20	P60866	119 aa	Known RBP	13.96	□□□□□ -0.17
LTBP4-223	ENST00000598717	RPL19	P84098	196 aa	Known RBP	13.96	□□□□□ -0.17
LTBP4-223	ENST00000598717	SVBP	Q8N300	66 aa		13.96	□□□□□ -0.17
LTBP4-223	ENST00000598717		X6R8D5	127 aa		13.96	□□□□□ -0.17
LTBP4-223	ENST00000598717	GNRH2	O43555	120 aa		13.95	□□□□□ -0.18
LTBP4-223	ENST00000598717	MT-ND4L	P03901	98 aa		13.95	□□□□□ -0.18
LTBP4-223	ENST00000598717	TYMS	P04818	313 aa		13.95	□□□□□ -0.18
LTBP4-223	ENST00000598717	TP53TG3	Q9ULZ0	132 aa		13.95	□□□□□ -0.18
LTBP4-223	ENST00000598717	GRIFIN	A4D1Z8	144 aa		13.94	□□□□□ -0.18
LTBP4-223	ENST00000598717	PPP1R2P9	O14990	202 aa		13.94	□□□□□ -0.18
LTBP4-223	ENST00000598717	MIF	P14174	115 aa		13.94	□□□□□ -0.18
LTBP4-223	ENST00000598717	AZU1	P20160	251 aa		13.94	□□□□□ -0.18
LTBP4-223	ENST00000598717	S100A4	P26447	101 aa	Known RBP	13.94	□□□□□ -0.18
LTBP4-223	ENST00000598717	ASIP	P42127	132 aa		13.94	□□□□□ -0.18
LTBP4-223	ENST00000598717	ZNF493	Q6ZR52	646 aa		13.94	□□□□□ -0.18
LTBP4-223	ENST00000598717	C16orf74	Q96GX8	76 aa		13.94	□□□□□ -0.18
LTBP4-223	ENST00000598717	SNAPIN	O95295	136 aa		13.93	□□□□□ -0.18
LTBP4-223	ENST00000598717	RNF212	Q495C1	297 aa		13.93	□□□□□ -0.18
LTBP4-223	ENST00000598717	CLRN3	Q8NCR9	226 aa		13.93	□□□□□ -0.18
LTBP4-223	ENST00000598717	TMEM263	Q8WUH6	116 aa	Known RBP	13.93	□□□□□ -0.18
LTBP4-223	ENST00000598717	ANAPC16	Q96DE5	110 aa		13.93	□□□□□ -0.18
LTBP4-223	ENST00000598717		A8MWL6	223 aa		13.92	□□□□□ -0.18
LTBP4-223	ENST00000598717	ZNF415	Q09FC8	603 aa		13.92	□□□□□ -0.18
LTBP4-223	ENST00000598717	CT83	Q5H943	113 aa		13.92	□□□□□ -0.18
LTBP4-223	ENST00000598717	IGHV3-16	A0A0C4DH30	117 aa		13.91	□□□□□ -0.18
LTBP4-223	ENST00000598717	CXCL1	P09341	107 aa		13.91	□□□□□ -0.18
LTBP4-223	ENST00000598717	NHLRC4	P0CG21	123 aa	Predicted RBP	13.91	□□□□□ -0.18
LTBP4-223	ENST00000598717	RNASE8	Q8TDE3	154 aa	Known RBP	13.91	□□□□□ -0.18
LTBP4-223	ENST00000598717	MDFIC	Q9P1T7	246 aa		13.91	□□□□□ -0.18
LTBP4-223	ENST00000598717		V9GYV3	84 aa		13.91	□□□□□ -0.18
LTBP4-223	ENST00000598717	IGHV4-28	A0A0C4DH34	117 aa		13.9	□□□□□ -0.18
LTBP4-223	ENST00000598717	SNURFL	B1AK76	121 aa		13.9	□□□□□ -0.18
LTBP4-223	ENST00000598717	GZMB	P10144	247 aa		13.9	□□□□□ -0.18
LTBP4-223	ENST00000598717	RHEB	Q15382	184 aa		13.9	□□□□□ -0.18
LTBP4-223	ENST00000598717	DNLZ	Q5SXM8	178 aa		13.9	□□□□□ -0.18
LTBP4-223	ENST00000598717	GSN-AS1	Q9NRJ2	163 aa		13.9	□□□□□ -0.18
LTBP4-223	ENST00000598717	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.9	□□□□□ -0.18
LTBP4-223	ENST00000598717	C7orf77	A4D0Y5	90 aa		13.89	□□□□□ -0.19
LTBP4-223	ENST00000598717	EMP1	P54849	157 aa		13.89	□□□□□ -0.19
LTBP4-223	ENST00000598717		Q8NAQ8	132 aa		13.89	□□□□□ -0.19
LTBP4-223	ENST00000598717	TSKU	Q8WUA8	353 aa		13.89	□□□□□ -0.19
LTBP4-223	ENST00000598717	CTDSP1	Q9GZU7	261 aa		13.89	□□□□□ -0.19
LTBP4-223	ENST00000598717	RPS10P5	Q9NQ39	176 aa		13.89	□□□□□ -0.19
LTBP4-223	ENST00000598717		H3BVH4	76 aa		13.88	□□□□□ -0.19
LTBP4-223	ENST00000598717	ARMS2	P0C7Q2	107 aa		13.88	□□□□□ -0.19
LTBP4-223	ENST00000598717	TCL1A	P56279	114 aa		13.88	□□□□□ -0.19
LTBP4-223	ENST00000598717	ZNF575	Q86XF7	245 aa		13.88	□□□□□ -0.19
LTBP4-223	ENST00000598717	C11orf72	Q8NBR9	251 aa		13.88	□□□□□ -0.19
LTBP4-223	ENST00000598717	TPPP3	Q9BW30	176 aa		13.88	□□□□□ -0.19
LTBP4-223	ENST00000598717	IL36B	Q9NZH7	164 aa		13.88	□□□□□ -0.19
LTBP4-223	ENST00000598717		A0A1W2PPQ1	181 aa		13.87	□□□□□ -0.19
LTBP4-223	ENST00000598717	DEFB4A	O15263	64 aa		13.87	□□□□□ -0.19
LTBP4-223	ENST00000598717	ATP6V1G1	O75348	118 aa		13.87	□□□□□ -0.19
LTBP4-223	ENST00000598717	RNASE3	P12724	160 aa	Known RBP	13.87	□□□□□ -0.19
LTBP4-223	ENST00000598717	FER1L6-AS1	Q8NA97	138 aa		13.87	□□□□□ -0.19
LTBP4-223	ENST00000598717	SPX	Q9BT56	116 aa		13.87	□□□□□ -0.19
LTBP4-223	ENST00000598717	GFRA4	Q9GZZ7	299 aa		13.87	□□□□□ -0.19
LTBP4-223	ENST00000598717	FAM231B	A6NCW3	169 aa		13.86	□□□□□ -0.19
LTBP4-223	ENST00000598717	MED14OS	P0DP75	135 aa		13.86	□□□□□ -0.19
LTBP4-223	ENST00000598717	C9orf85	Q96MD7	179 aa		13.86	□□□□□ -0.19
LTBP4-223	ENST00000598717	PHLDA3	Q9Y5J5	127 aa		13.86	□□□□□ -0.19
LTBP4-223	ENST00000598717		A0A087WWC5	75 aa		13.85	□□□□□ -0.19
LTBP4-223	ENST00000598717	PLAC8L1	A1L4L8	177 aa		13.85	□□□□□ -0.19
LTBP4-223	ENST00000598717	IGLC6	P0CF74	106 aa		13.85	□□□□□ -0.19
LTBP4-223	ENST00000598717	S100A1	P23297	94 aa		13.85	□□□□□ -0.19
LTBP4-223	ENST00000598717	GTSF1	Q8WW33	167 aa		13.85	□□□□□ -0.19
LTBP4-223	ENST00000598717	NOP10	Q9NPE3	64 aa	Known RBP	13.85	□□□□□ -0.19
LTBP4-223	ENST00000598717	MEGF8	Q7Z7M0	2845 aa		13.85	□□□□□ -0.19
LTBP4-223	ENST00000598717		F2Z2F3	143 aa		13.84	□□□□□ -0.19
LTBP4-223	ENST00000598717	OR5AL1	P0C617	328 aa		13.84	□□□□□ -0.19
LTBP4-223	ENST00000598717	DAZ2	Q13117	558 aa	Known RBP	13.84	□□□□□ -0.19
LTBP4-223	ENST00000598717	SSBP4	Q9BWG4	385 aa	Predicted RBP	13.84	□□□□□ -0.19
LTBP4-223	ENST00000598717	C11orf68	Q9H3H3	251 aa	Known RBP	13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms