RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 ZNF492Q9P255 531 aa8.25□□□□□ -1.09
SOX2-OT-228ENST00000597828 TEX46H3BTG2 121 aa8.24□□□□□ -1.09
SOX2-OT-228ENST00000597828 SFTA3P0C7M3 94 aa8.24□□□□□ -1.09
SOX2-OT-228ENST00000597828 RAB2AP61019 212 aa8.24□□□□□ -1.09
SOX2-OT-228ENST00000597828 FHL2Q14192 279 aa8.24□□□□□ -1.09
SOX2-OT-228ENST00000597828 PQLC2Q6ZP29 291 aa8.24□□□□□ -1.09
SOX2-OT-228ENST00000597828 IQCF2Q8IXL9 164 aa8.24□□□□□ -1.09
SOX2-OT-228ENST00000597828 C9orf62Q8N4C0 152 aa8.24□□□□□ -1.09
SOX2-OT-228ENST00000597828 FXYD5Q96DB9 178 aa8.24□□□□□ -1.09
SOX2-OT-228ENST00000597828 EIF3GO75821 320 aaKnown RBP eCLIP8.23□□□□□ -1.09
SOX2-OT-228ENST00000597828 NBEAP1P0C6P0 100 aa8.23□□□□□ -1.09
SOX2-OT-228ENST00000597828 RAB5CP51148 216 aa8.23□□□□□ -1.09
SOX2-OT-228ENST00000597828 NKX2-5P52952 324 aaPredicted RBP8.23□□□□□ -1.09
SOX2-OT-228ENST00000597828 ZNF415Q09FC8 603 aa8.23□□□□□ -1.09
SOX2-OT-228ENST00000597828 LYPD5Q6UWN5 251 aa8.23□□□□□ -1.09
SOX2-OT-228ENST00000597828 WFDC10BQ8IUB3 73 aa8.23□□□□□ -1.09
SOX2-OT-228ENST00000597828 MDFICQ9P1T7 246 aa8.23□□□□□ -1.09
SOX2-OT-228ENST00000597828 PRO0255Q9UI72 69 aa8.23□□□□□ -1.09
SOX2-OT-228ENST00000597828 HMGB3O15347 200 aaKnown RBP8.22□□□□□ -1.09
SOX2-OT-228ENST00000597828 CXorf1O96002 111 aa8.22□□□□□ -1.09
SOX2-OT-228ENST00000597828 NMBP08949 121 aa8.22□□□□□ -1.09
SOX2-OT-228ENST00000597828 ZNF138P52744 262 aa8.22□□□□□ -1.09
SOX2-OT-228ENST00000597828 XGP55808 180 aa8.22□□□□□ -1.09
SOX2-OT-228ENST00000597828 ERVFC1-1P60608 527 aa8.22□□□□□ -1.09
SOX2-OT-228ENST00000597828 FAM74A1Q5RGS3 127 aa8.22□□□□□ -1.09
SOX2-OT-228ENST00000597828 DPPA3Q6W0C5 159 aa8.22□□□□□ -1.09
SOX2-OT-228ENST00000597828 TMED6Q8WW62 240 aa8.22□□□□□ -1.09
SOX2-OT-228ENST00000597828 RAB24Q969Q5 203 aa8.22□□□□□ -1.09
SOX2-OT-228ENST00000597828 ZNF479Q96JC4 524 aa8.22□□□□□ -1.09
SOX2-OT-228ENST00000597828 HHLA3Q9XRX5 114 aa8.22□□□□□ -1.09
SOX2-OT-228ENST00000597828 VPS13BQ7Z7G8 4022 aa8.21□□□□□ -1.09
SOX2-OT-228ENST00000597828 CTXND1A0A1B0GTU2 59 aa8.21□□□□□ -1.1
SOX2-OT-228ENST00000597828 EPM2AB3EWF7 344 aa8.21□□□□□ -1.1
SOX2-OT-228ENST00000597828 K7EQD1 137 aa8.21□□□□□ -1.1
SOX2-OT-228ENST00000597828 CSN1S1P47710 185 aa8.21□□□□□ -1.1
SOX2-OT-228ENST00000597828 KRTAP10-1P60331 282 aa8.21□□□□□ -1.1
SOX2-OT-228ENST00000597828 UBE2L3P68036 154 aaKnown RBP8.21□□□□□ -1.1
SOX2-OT-228ENST00000597828 FAM213BQ8TBF2 198 aa8.21□□□□□ -1.1
SOX2-OT-228ENST00000597828 TMEM167BQ9NRX6 74 aa8.21□□□□□ -1.1
SOX2-OT-228ENST00000597828 A0A087WTM6 91 aa8.2□□□□□ -1.1
SOX2-OT-228ENST00000597828 TRGV4A0A0C4DH28 118 aa8.2□□□□□ -1.1
SOX2-OT-228ENST00000597828 H2AFB1P0C5Y9 115 aa8.2□□□□□ -1.1
SOX2-OT-228ENST00000597828 RANP62826 216 aaKnown RBP8.2□□□□□ -1.1
SOX2-OT-228ENST00000597828 MRPL23Q16540 153 aaKnown RBP8.2□□□□□ -1.1
SOX2-OT-228ENST00000597828 TMEM183BQ1AE95 376 aa8.2□□□□□ -1.1
SOX2-OT-228ENST00000597828 NEGR1Q7Z3B1 354 aa8.2□□□□□ -1.1
SOX2-OT-228ENST00000597828 TMEM183AQ8IXX5 376 aa8.2□□□□□ -1.1
SOX2-OT-228ENST00000597828 SFT2D1Q8WV19 159 aa8.2□□□□□ -1.1
SOX2-OT-228ENST00000597828 HERC1Q15751 4861 aa8.19□□□□□ -1.1
SOX2-OT-228ENST00000597828 LOC100131303A0A0U1RQF7 123 aa8.19□□□□□ -1.1
SOX2-OT-228ENST00000597828 STAG3L2P0CL84 134 aa8.19□□□□□ -1.1
SOX2-OT-228ENST00000597828 STAG3L3P0CL85 134 aa8.19□□□□□ -1.1
SOX2-OT-228ENST00000597828 ARL14EPLP0DKL9 152 aa8.19□□□□□ -1.1
SOX2-OT-228ENST00000597828 GYPEP15421 78 aa8.19□□□□□ -1.1
SOX2-OT-228ENST00000597828 SRIP30626 198 aa8.19□□□□□ -1.1
SOX2-OT-228ENST00000597828 HAMPP81172 84 aa8.19□□□□□ -1.1
SOX2-OT-228ENST00000597828 LYPD1Q8N2G4 141 aa8.19□□□□□ -1.1
SOX2-OT-228ENST00000597828 CMTM2Q8TAZ6 248 aa8.19□□□□□ -1.1
SOX2-OT-228ENST00000597828 NAGKQ9UJ70 344 aa8.19□□□□□ -1.1
SOX2-OT-228ENST00000597828 RPH3ALQ9UNE2 315 aa8.19□□□□□ -1.1
SOX2-OT-228ENST00000597828 LY96Q9Y6Y9 160 aa8.19□□□□□ -1.1
SOX2-OT-228ENST00000597828 DNAH8Q96JB1 4490 aa8.18□□□□□ -1.1
SOX2-OT-228ENST00000597828 MAP1LC3B2A6NCE7 125 aa8.18□□□□□ -1.1
SOX2-OT-228ENST00000597828 DIRC3C9JPN6 131 aa8.18□□□□□ -1.1
SOX2-OT-228ENST00000597828 EREGO14944 169 aa8.18□□□□□ -1.1
SOX2-OT-228ENST00000597828 GCHFRP30047 84 aa8.18□□□□□ -1.1
SOX2-OT-228ENST00000597828 SULT1A2P50226 295 aa8.18□□□□□ -1.1
SOX2-OT-228ENST00000597828 PPT1P50897 306 aa8.18□□□□□ -1.1
SOX2-OT-228ENST00000597828 BLOC1S1P78537 153 aa8.18□□□□□ -1.1
SOX2-OT-228ENST00000597828 Q5VSD8 79 aa8.18□□□□□ -1.1
SOX2-OT-228ENST00000597828 Q6AWC8 147 aa8.18□□□□□ -1.1
SOX2-OT-228ENST00000597828 MAP1LC3BQ9GZQ8 125 aa8.18□□□□□ -1.1
SOX2-OT-228ENST00000597828 PGPEP1Q9NXJ5 209 aa8.18□□□□□ -1.1
SOX2-OT-228ENST00000597828 FLG2Q5D862 2391 aaPredicted RBP8.17□□□□□ -1.1
SOX2-OT-228ENST00000597828 TRBV7-9A0A0J9YWB2 115 aa8.17□□□□□ -1.1
SOX2-OT-228ENST00000597828 RBAKDNA6NC62 111 aa8.17□□□□□ -1.1
SOX2-OT-228ENST00000597828 PGPA6NDG6 321 aa8.17□□□□□ -1.1
SOX2-OT-228ENST00000597828 F6UZH7 168 aa8.17□□□□□ -1.1
SOX2-OT-228ENST00000597828 FGF8P55075 233 aaPredicted RBP8.17□□□□□ -1.1
SOX2-OT-228ENST00000597828 SLAQ13239 276 aa8.17□□□□□ -1.1
SOX2-OT-228ENST00000597828 CDPF1Q6NVV7 123 aa8.17□□□□□ -1.1
SOX2-OT-228ENST00000597828 PCNPQ8WW12 178 aaKnown RBP8.17□□□□□ -1.1
SOX2-OT-228ENST00000597828 NKX6-2Q9C056 277 aaPredicted RBP8.17□□□□□ -1.1
SOX2-OT-228ENST00000597828 MSRB1Q9NZV6 116 aa8.17□□□□□ -1.1
SOX2-OT-228ENST00000597828 TRGV11A0A075B6L2 103 aa8.16□□□□□ -1.1
SOX2-OT-228ENST00000597828 IGHV3-16A0A0C4DH30 117 aa8.16□□□□□ -1.1
SOX2-OT-228ENST00000597828 A0A1B0GV50 99 aa8.16□□□□□ -1.1
SOX2-OT-228ENST00000597828 K7EQM0 130 aa8.16□□□□□ -1.1
SOX2-OT-228ENST00000597828 GNRH2O43555 120 aa8.16□□□□□ -1.1
SOX2-OT-228ENST00000597828 IFNA7P01567 189 aa8.16□□□□□ -1.1
SOX2-OT-228ENST00000597828 INAFM2P0DMQ5 153 aa8.16□□□□□ -1.1
SOX2-OT-228ENST00000597828 FAM159AQ6UWV7 190 aa8.16□□□□□ -1.1
SOX2-OT-228ENST00000597828 ALKAL2Q6UX46 152 aa8.16□□□□□ -1.1
SOX2-OT-228ENST00000597828 NFE4Q86UQ8 179 aa8.16□□□□□ -1.1
SOX2-OT-228ENST00000597828 MBD3L1Q8WWY6 194 aa8.16□□□□□ -1.1
SOX2-OT-228ENST00000597828 RASL10AQ92737 203 aa8.16□□□□□ -1.1
SOX2-OT-228ENST00000597828 OTORQ9NRC9 128 aa8.16□□□□□ -1.1
SOX2-OT-228ENST00000597828 TRAV8-1A0A0A6YYK1 113 aa8.15□□□□□ -1.1
SOX2-OT-228ENST00000597828 TRAV4A0A0B4J268 109 aa8.15□□□□□ -1.1
SOX2-OT-228ENST00000597828 SMR3BP02814 79 aaPredicted RBP8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms