RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 GNG5P63218 68 aa10.57□□□□□ -0.72
TGFB1-202ENST00000597453 SVBPQ8N300 66 aa10.57□□□□□ -0.72
TGFB1-202ENST00000597453 DNAH5Q8TE73 4624 aa10.57□□□□□ -0.72
TGFB1-202ENST00000597453 ZNF324O75467 553 aaPredicted RBP10.56□□□□□ -0.72
TGFB1-202ENST00000597453 APOC3P02656 99 aa10.56□□□□□ -0.72
TGFB1-202ENST00000597453 FGF8P55075 233 aaPredicted RBP10.56□□□□□ -0.72
TGFB1-202ENST00000597453 TNP2Q05952 138 aa10.56□□□□□ -0.72
TGFB1-202ENST00000597453 PRR9Q5T870 116 aa10.56□□□□□ -0.72
TGFB1-202ENST00000597453 DPPA3Q6W0C5 159 aa10.56□□□□□ -0.72
TGFB1-202ENST00000597453 LINC00612Q8N6U2 182 aa10.56□□□□□ -0.72
TGFB1-202ENST00000597453 LYPD6BQ8NI32 183 aa10.56□□□□□ -0.72
TGFB1-202ENST00000597453 LINC00467Q9BRT7 94 aa10.56□□□□□ -0.72
TGFB1-202ENST00000597453 TCRAP04437 139 aa10.55□□□□□ -0.72
TGFB1-202ENST00000597453 HOXA5P20719 270 aa10.55□□□□□ -0.72
TGFB1-202ENST00000597453 RNASE4P34096 147 aaKnown RBP10.55□□□□□ -0.72
TGFB1-202ENST00000597453 FHITP49789 147 aa10.55□□□□□ -0.72
TGFB1-202ENST00000597453 CCL18P55774 89 aa10.55□□□□□ -0.72
TGFB1-202ENST00000597453 SUMO1P63165 101 aaKnown RBP10.55□□□□□ -0.72
TGFB1-202ENST00000597453 FAM213BQ8TBF2 198 aa10.55□□□□□ -0.72
TGFB1-202ENST00000597453 SEC11CQ9BY50 192 aa10.55□□□□□ -0.72
TGFB1-202ENST00000597453 NKX6-2Q9C056 277 aaPredicted RBP10.55□□□□□ -0.72
TGFB1-202ENST00000597453 TMPRSS5Q9H3S3 457 aa10.55□□□□□ -0.72
TGFB1-202ENST00000597453 APOBP04114 4563 aaKnown RBP10.54□□□□□ -0.72
TGFB1-202ENST00000597453 TRAV26-1A0A087WT03 109 aa10.54□□□□□ -0.72
TGFB1-202ENST00000597453 TRAV8-1A0A0A6YYK1 113 aa10.54□□□□□ -0.72
TGFB1-202ENST00000597453 GAGE12BA1L429 117 aa10.54□□□□□ -0.72
TGFB1-202ENST00000597453 K7EQM0 130 aa10.54□□□□□ -0.72
TGFB1-202ENST00000597453 GAGE7O76087 117 aa10.54□□□□□ -0.72
TGFB1-202ENST00000597453 GAGE12FP0CL80 117 aa10.54□□□□□ -0.72
TGFB1-202ENST00000597453 GAGE12GP0CL81 117 aa10.54□□□□□ -0.72
TGFB1-202ENST00000597453 GAGE12IP0CL82 117 aa10.54□□□□□ -0.72
TGFB1-202ENST00000597453 OR5I1Q13606 314 aa10.54□□□□□ -0.72
TGFB1-202ENST00000597453 C6orf223Q8N319 242 aa10.54□□□□□ -0.72
TGFB1-202ENST00000597453 EPDR1Q9UM22 224 aa10.54□□□□□ -0.72
TGFB1-202ENST00000597453 FAM74A7A6NL05 159 aa10.53□□□□□ -0.72
TGFB1-202ENST00000597453 UBE2G2P60604 165 aa10.53□□□□□ -0.72
TGFB1-202ENST00000597453 Q6AWC8 147 aa10.53□□□□□ -0.72
TGFB1-202ENST00000597453 CYB561D1Q8N8Q1 229 aa10.53□□□□□ -0.72
TGFB1-202ENST00000597453 MBD3L1Q8WWY6 194 aa10.53□□□□□ -0.72
TGFB1-202ENST00000597453 ARL2-SNX15V9GYD0 113 aa10.53□□□□□ -0.72
TGFB1-202ENST00000597453 A0A0J9YY99 117 aa10.52□□□□□ -0.73
TGFB1-202ENST00000597453 FBLL1A6NHQ2 334 aaKnown RBP10.52□□□□□ -0.73
TGFB1-202ENST00000597453 SNURFLB1AK76 121 aa10.52□□□□□ -0.73
TGFB1-202ENST00000597453 SNAPINO95295 136 aa10.52□□□□□ -0.73
TGFB1-202ENST00000597453 H2AFB1P0C5Y9 115 aa10.52□□□□□ -0.73
TGFB1-202ENST00000597453 ANXA2RQ3ZCQ2 193 aa10.52□□□□□ -0.73
TGFB1-202ENST00000597453 TMEM75Q8N9X5 138 aa10.52□□□□□ -0.73
TGFB1-202ENST00000597453 SFT2D1Q8WV19 159 aa10.52□□□□□ -0.73
TGFB1-202ENST00000597453 Q6ZTI0 123 aa10.51□□□□□ -0.73
TGFB1-202ENST00000597453 CLRN3Q8NCR9 226 aa10.51□□□□□ -0.73
TGFB1-202ENST00000597453 TVP23CQ96ET8 276 aa10.51□□□□□ -0.73
TGFB1-202ENST00000597453 NDFIP1Q9BT67 221 aa10.51□□□□□ -0.73
TGFB1-202ENST00000597453 KRTAP1-5Q9BYS1 174 aa10.51□□□□□ -0.73
TGFB1-202ENST00000597453 SMDT1Q9H4I9 107 aa10.51□□□□□ -0.73
TGFB1-202ENST00000597453 TREM1Q9NP99 234 aa10.51□□□□□ -0.73
TGFB1-202ENST00000597453 IGHV1OR15-1A0A075B7D0 117 aa10.5□□□□□ -0.73
TGFB1-202ENST00000597453 F8W036 122 aa10.5□□□□□ -0.73
TGFB1-202ENST00000597453 IGLV2-11P01706 119 aa10.5□□□□□ -0.73
TGFB1-202ENST00000597453 FLI1Q01543 452 aaPredicted RBP10.5□□□□□ -0.73
TGFB1-202ENST00000597453 DAZ2Q13117 558 aaKnown RBP10.5□□□□□ -0.73
TGFB1-202ENST00000597453 IBA57Q5T440 356 aaKnown RBP10.5□□□□□ -0.73
TGFB1-202ENST00000597453 ATRAIDQ6UW56 229 aa10.5□□□□□ -0.73
TGFB1-202ENST00000597453 Q6ZQT7 251 aa10.5□□□□□ -0.73
TGFB1-202ENST00000597453 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.5□□□□□ -0.73
TGFB1-202ENST00000597453 C11orf72Q8NBR9 251 aa10.5□□□□□ -0.73
TGFB1-202ENST00000597453 HIST1H2BAQ96A08 127 aa10.5□□□□□ -0.73
TGFB1-202ENST00000597453 SGK494Q96LW2 274 aa10.5□□□□□ -0.73
TGFB1-202ENST00000597453 TCEAL7Q9BRU2 100 aa10.5□□□□□ -0.73
TGFB1-202ENST00000597453 KRTAP4-5Q9BYR2 181 aa10.5□□□□□ -0.73
TGFB1-202ENST00000597453 GSN-AS1Q9NRJ2 163 aa10.5□□□□□ -0.73
TGFB1-202ENST00000597453 PSG8Q9UQ74 426 aa10.5□□□□□ -0.73
TGFB1-202ENST00000597453 F6UZH7 168 aa10.49□□□□□ -0.73
TGFB1-202ENST00000597453 PEX7O00628 323 aa10.49□□□□□ -0.73
TGFB1-202ENST00000597453 ADCYAP1P18509 176 aa10.49□□□□□ -0.73
TGFB1-202ENST00000597453 ESRGQ1W209 222 aa10.49□□□□□ -0.73
TGFB1-202ENST00000597453 Q9H8V8 135 aa10.49□□□□□ -0.73
TGFB1-202ENST00000597453 TRAV21A0A0B4J279 112 aa10.48□□□□□ -0.73
TGFB1-202ENST00000597453 C16orf90A8MZG2 172 aa10.48□□□□□ -0.73
TGFB1-202ENST00000597453 PPT1P50897 306 aa10.48□□□□□ -0.73
TGFB1-202ENST00000597453 TCL1AP56279 114 aa10.48□□□□□ -0.73
TGFB1-202ENST00000597453 TP53TG3Q9ULZ0 132 aa10.48□□□□□ -0.73
TGFB1-202ENST00000597453 TRAV1-1A0A0B4J248 108 aa10.47□□□□□ -0.73
TGFB1-202ENST00000597453 A0A1B0GV50 99 aa10.47□□□□□ -0.73
TGFB1-202ENST00000597453 H3BNG1 76 aa10.47□□□□□ -0.73
TGFB1-202ENST00000597453 PAGE4O60829 102 aa10.47□□□□□ -0.73
TGFB1-202ENST00000597453 PEA15Q15121 130 aa10.47□□□□□ -0.73
TGFB1-202ENST00000597453 TDRG1Q3Y452 100 aa10.47□□□□□ -0.73
TGFB1-202ENST00000597453 MUC21Q5SSG8 566 aa10.47□□□□□ -0.73
TGFB1-202ENST00000597453 SAPCD1Q5SSQ6 148 aa10.47□□□□□ -0.73
TGFB1-202ENST00000597453 CST9LP1Q5W188 147 aa10.47□□□□□ -0.73
TGFB1-202ENST00000597453 FAM159AQ6UWV7 190 aa10.47□□□□□ -0.73
TGFB1-202ENST00000597453 PRNTQ86SH4 94 aa10.47□□□□□ -0.73
TGFB1-202ENST00000597453 VSIG2Q96IQ7 327 aa10.47□□□□□ -0.73
TGFB1-202ENST00000597453 UPK3BQ9BT76 320 aa10.47□□□□□ -0.73
TGFB1-202ENST00000597453 TRAV34A0A0B4J273 112 aa10.46□□□□□ -0.73
TGFB1-202ENST00000597453 ZNF415Q09FC8 603 aa10.46□□□□□ -0.73
TGFB1-202ENST00000597453 Q86TA4 180 aa10.46□□□□□ -0.73
TGFB1-202ENST00000597453 LINC00479Q96M42 142 aa10.46□□□□□ -0.73
TGFB1-202ENST00000597453 C8orf49Q96NF6 230 aa10.46□□□□□ -0.73
TGFB1-202ENST00000597453 KLF12Q9Y4X4 402 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms